RNA–Protein interactions for RNA: ENST00000441090.6

LRCH3-207, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2 BASIC

Gene LRCH3, Length 2,034 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-207ENST00000441090 FBXO2Q9UK22 296 aaPredicted RBP21.65■■□□□ 1.06
LRCH3-207ENST00000441090 CCNL1Q9UK58 526 aaPredicted RBP21.65■■□□□ 1.06
LRCH3-207ENST00000441090 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.65■■□□□ 1.06
LRCH3-207ENST00000441090 USP17L12C9JPN9 530 aa21.65■■□□□ 1.06
LRCH3-207ENST00000441090 USP17L21D6R901 530 aa21.65■■□□□ 1.06
LRCH3-207ENST00000441090 PTPREP23469 700 aa21.65■■□□□ 1.06
LRCH3-207ENST00000441090 PNOCQ13519 176 aa21.65■■□□□ 1.06
LRCH3-207ENST00000441090 LONRF3Q496Y0 759 aa21.65■■□□□ 1.06
LRCH3-207ENST00000441090 RBM28Q9NW13 759 aaKnown RBP21.65■■□□□ 1.06
LRCH3-207ENST00000441090 TM4SF1P30408 202 aa21.64■■□□□ 1.05
LRCH3-207ENST00000441090 RBM10P98175 930 aaKnown RBP21.64■■□□□ 1.05
LRCH3-207ENST00000441090 AKAP17AQ02040 695 aaKnown RBP21.64■■□□□ 1.05
LRCH3-207ENST00000441090 ARID5BQ14865 1188 aa21.64■■□□□ 1.05
LRCH3-207ENST00000441090 PKN1Q16512 942 aa21.64■■□□□ 1.05
LRCH3-207ENST00000441090 FILIP1Q7Z7B0 1213 aa21.64■■□□□ 1.05
LRCH3-207ENST00000441090 CNNM3Q8NE01 707 aa21.64■■□□□ 1.05
LRCH3-207ENST00000441090 OXER1Q8TDS5 423 aa21.64■■□□□ 1.05
LRCH3-207ENST00000441090 CRNKL1Q9BZJ0 848 aaKnown RBP21.64■■□□□ 1.05
LRCH3-207ENST00000441090 IMPACTQ9P2X3 320 aa21.64■■□□□ 1.05
LRCH3-207ENST00000441090 IRS2Q9Y4H2 1338 aa21.64■■□□□ 1.05
LRCH3-207ENST00000441090 PRPF3O43395 683 aaKnown RBP21.63■■□□□ 1.05
LRCH3-207ENST00000441090 ORC4O43929 436 aa21.63■■□□□ 1.05
LRCH3-207ENST00000441090 PRDM1O75626 825 aa21.63■■□□□ 1.05
LRCH3-207ENST00000441090 CALM1P0DP23 149 aa21.63■■□□□ 1.05
LRCH3-207ENST00000441090 CALM2P0DP24 149 aa21.63■■□□□ 1.05
LRCH3-207ENST00000441090 CALM3P0DP25 149 aa21.63■■□□□ 1.05
LRCH3-207ENST00000441090 XBP1P17861 261 aa21.63■■□□□ 1.05
LRCH3-207ENST00000441090 TROAPQ12815 778 aa21.63■■□□□ 1.05
LRCH3-207ENST00000441090 ARHGEF1Q92888 912 aaKnown RBP21.63■■□□□ 1.05
LRCH3-207ENST00000441090 SHISA4Q96DD7 197 aa21.63■■□□□ 1.05
LRCH3-207ENST00000441090 OSBPL5Q9H0X9 879 aaPredicted RBP21.63■■□□□ 1.05
LRCH3-207ENST00000441090 DCP1AQ9NPI6 582 aaPredicted RBP21.63■■□□□ 1.05
LRCH3-207ENST00000441090 AATFQ9NY61 560 aaKnown RBP eCLIP21.63■■□□□ 1.05
LRCH3-207ENST00000441090 PCDHB6Q9Y5E3 794 aa21.63■■□□□ 1.05
LRCH3-207ENST00000441090 PRDX5P30044 214 aa21.63■■□□□ 1.05
LRCH3-207ENST00000441090 GSDMDP57764 484 aa21.63■■□□□ 1.05
LRCH3-207ENST00000441090 ISM2Q6H9L7 571 aa21.63■■□□□ 1.05
LRCH3-207ENST00000441090 CCDC24Q8N4L8 307 aa21.63■■□□□ 1.05
LRCH3-207ENST00000441090 ZNF579Q8NAF0 562 aaKnown RBP21.63■■□□□ 1.05
LRCH3-207ENST00000441090 ATP8A2Q9NTI2 1148 aa21.63■■□□□ 1.05
LRCH3-207ENST00000441090 FAM13BQ9NYF5 915 aa21.63■■□□□ 1.05
LRCH3-207ENST00000441090 CEP131Q9UPN4 1083 aa21.63■■□□□ 1.05
LRCH3-207ENST00000441090 DDAH1O94760 285 aa21.62■■□□□ 1.05
LRCH3-207ENST00000441090 AMIGO3Q86WK7 504 aa21.62■■□□□ 1.05
LRCH3-207ENST00000441090 XPO4Q9C0E2 1151 aaKnown RBP21.62■■□□□ 1.05
LRCH3-207ENST00000441090 PDCL3Q9H2J4 239 aa21.62■■□□□ 1.05
LRCH3-207ENST00000441090 CCZ1BP86790 482 aa21.62■■□□□ 1.05
LRCH3-207ENST00000441090 CCZ1P86791 482 aaPredicted RBP21.62■■□□□ 1.05
LRCH3-207ENST00000441090 GRIN1Q05586 938 aa21.62■■□□□ 1.05
LRCH3-207ENST00000441090 PHF20Q9BVI0 1012 aa21.62■■□□□ 1.05
LRCH3-207ENST00000441090 IFNKQ9P0W0 207 aa21.62■■□□□ 1.05
LRCH3-207ENST00000441090 SRPRBQ9Y5M8 271 aaKnown RBP21.62■■□□□ 1.05
LRCH3-207ENST00000441090 MORC2Q9Y6X9 1032 aaPredicted RBP21.62■■□□□ 1.05
LRCH3-207ENST00000441090 PLEKHA8P1O95397 391 aa21.61■■□□□ 1.05
LRCH3-207ENST00000441090 MDM2Q00987 491 aaPredicted RBP21.61■■□□□ 1.05
LRCH3-207ENST00000441090 SBK1Q52WX2 424 aa21.61■■□□□ 1.05
LRCH3-207ENST00000441090 SPECC1Q5M775 1068 aa21.61■■□□□ 1.05
LRCH3-207ENST00000441090 FOXP4Q8IVH2 680 aaPredicted RBP21.61■■□□□ 1.05
LRCH3-207ENST00000441090 HSD3B7Q9H2F3 369 aa21.61■■□□□ 1.05
LRCH3-207ENST00000441090 CABP5Q9NP86 173 aa21.61■■□□□ 1.05
LRCH3-207ENST00000441090 VPS54Q9P1Q0 977 aa21.61■■□□□ 1.05
LRCH3-207ENST00000441090 ARPP21Q9UBL0 812 aaPredicted RBP21.61■■□□□ 1.05
LRCH3-207ENST00000441090 SMC2O95347 1197 aa21.6■■□□□ 1.05
LRCH3-207ENST00000441090 SKILP12757 684 aa21.6■■□□□ 1.05
LRCH3-207ENST00000441090 TXNRD3Q86VQ6 643 aa21.6■■□□□ 1.05
LRCH3-207ENST00000441090 C16orf45Q96MC5 204 aaPredicted RBP21.6■■□□□ 1.05
LRCH3-207ENST00000441090 MAP7D2Q96T17 732 aa21.6■■□□□ 1.05
LRCH3-207ENST00000441090 HOOK1Q9UJC3 728 aaKnown RBP21.6■■□□□ 1.05
LRCH3-207ENST00000441090 PCDHA5Q9Y5H7 936 aa21.6■■□□□ 1.05
LRCH3-207ENST00000441090 KRT2P35908 639 aa21.6■■□□□ 1.05
LRCH3-207ENST00000441090 EVX2Q03828 476 aa21.6■■□□□ 1.05
LRCH3-207ENST00000441090 TMTC3Q6ZXV5 915 aa21.6■■□□□ 1.05
LRCH3-207ENST00000441090 MYL5Q02045 173 aa21.59■■□□□ 1.05
LRCH3-207ENST00000441090 V9GY48 417 aaPredicted RBP21.59■■□□□ 1.05
LRCH3-207ENST00000441090 RIOK3O14730 519 aaKnown RBP21.58■■□□□ 1.05
LRCH3-207ENST00000441090 LMOD1P29536 600 aaPredicted RBP21.58■■□□□ 1.05
LRCH3-207ENST00000441090 FANCCQ00597 558 aa21.58■■□□□ 1.05
LRCH3-207ENST00000441090 SPTY2D1Q68D10 685 aaPredicted RBP21.58■■□□□ 1.05
LRCH3-207ENST00000441090 OLFM4Q6UX06 510 aa21.58■■□□□ 1.05
LRCH3-207ENST00000441090 NOL10Q9BSC4 688 aaKnown RBP21.58■■□□□ 1.05
LRCH3-207ENST00000441090 USP21Q9UK80 565 aa21.58■■□□□ 1.05
LRCH3-207ENST00000441090 CNTNAP5Q8WYK1 1306 aa21.58■■□□□ 1.05
LRCH3-207ENST00000441090 IGSF3O75054 1194 aa21.58■■□□□ 1.04
LRCH3-207ENST00000441090 TPD52L1Q16890 204 aaPredicted RBP21.58■■□□□ 1.04
LRCH3-207ENST00000441090 FOXN1O15353 648 aa21.57■■□□□ 1.04
LRCH3-207ENST00000441090 POLR2DO15514 142 aaKnown RBP21.57■■□□□ 1.04
LRCH3-207ENST00000441090 TNNT1P13805 278 aa21.57■■□□□ 1.04
LRCH3-207ENST00000441090 POSTNQ15063 836 aa21.57■■□□□ 1.04
LRCH3-207ENST00000441090 FAM182BQ5T319 152 aa21.57■■□□□ 1.04
LRCH3-207ENST00000441090 NT5DC1Q5TFE4 455 aa21.57■■□□□ 1.04
LRCH3-207ENST00000441090 TMC6Q7Z403 805 aa21.57■■□□□ 1.04
LRCH3-207ENST00000441090 MTERF4Q7Z6M4 381 aaKnown RBP21.57■■□□□ 1.04
LRCH3-207ENST00000441090 hCG_1642624A0A1W2PR95 340 aa21.56■■□□□ 1.04
LRCH3-207ENST00000441090 TRIM75PA6NK02 468 aa21.56■■□□□ 1.04
LRCH3-207ENST00000441090 MYO1BO43795 1136 aa21.56■■□□□ 1.04
LRCH3-207ENST00000441090 CYP2D6P10635 497 aa21.56■■□□□ 1.04
LRCH3-207ENST00000441090 ATP2B1P20020 1258 aa21.56■■□□□ 1.04
LRCH3-207ENST00000441090 PDE4BQ07343 736 aa21.56■■□□□ 1.04
LRCH3-207ENST00000441090 DHX8Q14562 1220 aaKnown RBP21.56■■□□□ 1.04
LRCH3-207ENST00000441090 DZIP1Q86YF9 867 aaKnown RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms