RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 AGXT2Q9BYV1 514 aa11.5□□□□□ -0.57
CUBN-204ENST00000438254 INCENPQ9NQS7 918 aa11.5□□□□□ -0.57
CUBN-204ENST00000438254 WDR19Q8NEZ3 1342 aa11.5□□□□□ -0.57
CUBN-204ENST00000438254 WDR90Q96KV7 1748 aa11.49□□□□□ -0.57
CUBN-204ENST00000438254 MINDY4BA8MYZ0 360 aa11.49□□□□□ -0.57
CUBN-204ENST00000438254 ORC4O43929 436 aa11.49□□□□□ -0.57
CUBN-204ENST00000438254 HMGB1P09429 215 aaKnown RBP11.49□□□□□ -0.57
CUBN-204ENST00000438254 EPS15P42566 896 aa11.49□□□□□ -0.57
CUBN-204ENST00000438254 NEK4P51957 841 aa11.49□□□□□ -0.57
CUBN-204ENST00000438254 HIRAP54198 1017 aaPredicted RBP11.49□□□□□ -0.57
CUBN-204ENST00000438254 ANTXR2P58335 489 aa11.49□□□□□ -0.57
CUBN-204ENST00000438254 LSM11P83369 360 aaKnown RBP eCLIP11.49□□□□□ -0.57
CUBN-204ENST00000438254 KIF4BQ2VIQ3 1234 aa11.49□□□□□ -0.57
CUBN-204ENST00000438254 BLOC1S2Q6QNY1 142 aa11.49□□□□□ -0.57
CUBN-204ENST00000438254 C16orf86Q6ZW13 317 aa11.49□□□□□ -0.57
CUBN-204ENST00000438254 DHX32Q7L7V1 743 aaKnown RBP11.49□□□□□ -0.57
CUBN-204ENST00000438254 SAMD7Q7Z3H4 446 aa11.49□□□□□ -0.57
CUBN-204ENST00000438254 FAM83AQ86UY5 434 aa11.49□□□□□ -0.57
CUBN-204ENST00000438254 TRPM4Q8TD43 1214 aa11.49□□□□□ -0.57
CUBN-204ENST00000438254 DDRGK1Q96HY6 314 aa11.49□□□□□ -0.57
CUBN-204ENST00000438254 TBC1D2Q9BYX2 928 aa11.49□□□□□ -0.57
CUBN-204ENST00000438254 EHD4Q9H223 541 aa11.49□□□□□ -0.57
CUBN-204ENST00000438254 CLRN2A0PK11 232 aa11.48□□□□□ -0.57
CUBN-204ENST00000438254 GLTPD2A6NH11 291 aa11.48□□□□□ -0.57
CUBN-204ENST00000438254 DDTLA6NHG4 134 aaPredicted RBP11.48□□□□□ -0.57
CUBN-204ENST00000438254 ANP32AP39687 249 aaKnown RBP11.48□□□□□ -0.57
CUBN-204ENST00000438254 PBX2P40425 430 aa11.48□□□□□ -0.57
CUBN-204ENST00000438254 NT5C2P49902 561 aa11.48□□□□□ -0.57
CUBN-204ENST00000438254 PICALMQ13492 652 aa11.48□□□□□ -0.57
CUBN-204ENST00000438254 TOB2Q14106 344 aaPredicted RBP11.48□□□□□ -0.57
CUBN-204ENST00000438254 MFSD6Q6ZSS7 791 aa11.48□□□□□ -0.57
CUBN-204ENST00000438254 CYB5R4Q7L1T6 521 aa11.48□□□□□ -0.57
CUBN-204ENST00000438254 NCOA7Q8NI08 942 aa11.48□□□□□ -0.57
CUBN-204ENST00000438254 DHX36Q9H2U1 1008 aaKnown RBP11.48□□□□□ -0.57
CUBN-204ENST00000438254 RNF41Q9H4P4 317 aaPredicted RBP11.48□□□□□ -0.57
CUBN-204ENST00000438254 SAP30BPQ9UHR5 308 aaKnown RBP11.48□□□□□ -0.57
CUBN-204ENST00000438254 CYP46A1Q9Y6A2 500 aa11.48□□□□□ -0.57
CUBN-204ENST00000438254 ASTN2O75129 1339 aaPredicted RBP11.48□□□□□ -0.57
CUBN-204ENST00000438254 POTECB2RU33 542 aa11.47□□□□□ -0.57
CUBN-204ENST00000438254 B4E1Z4 1266 aa11.47□□□□□ -0.57
CUBN-204ENST00000438254 H7C1D1 291 aa11.47□□□□□ -0.57
CUBN-204ENST00000438254 KIF3CO14782 793 aa11.47□□□□□ -0.57
CUBN-204ENST00000438254 AK2P54819 239 aa11.47□□□□□ -0.57
CUBN-204ENST00000438254 EVCP57679 992 aa11.47□□□□□ -0.57
CUBN-204ENST00000438254 TBC1D10BQ4KMP7 808 aaPredicted RBP11.47□□□□□ -0.57
CUBN-204ENST00000438254 TTC6Q86TZ1 520 aa11.47□□□□□ -0.57
CUBN-204ENST00000438254 FAM151AQ8WW52 585 aa11.47□□□□□ -0.57
CUBN-204ENST00000438254 KHSRPQ92945 711 aaKnown RBP eCLIP11.47□□□□□ -0.57
CUBN-204ENST00000438254 DYNLL2Q96FJ2 89 aa11.47□□□□□ -0.57
CUBN-204ENST00000438254 MTA3Q9BTC8 594 aa11.47□□□□□ -0.57
CUBN-204ENST00000438254 KRT23Q9C075 422 aa11.47□□□□□ -0.57
CUBN-204ENST00000438254 DNAJC18Q9H819 358 aa11.47□□□□□ -0.57
CUBN-204ENST00000438254 CNNM2Q9H8M5 875 aa11.47□□□□□ -0.57
CUBN-204ENST00000438254 ZSWIM5Q9P217 1185 aa11.47□□□□□ -0.57
CUBN-204ENST00000438254 GREB1LQ9C091 1923 aaPredicted RBP11.47□□□□□ -0.57
CUBN-204ENST00000438254 SCN4AP35499 1836 aa11.46□□□□□ -0.57
CUBN-204ENST00000438254 MYO1BO43795 1136 aa11.46□□□□□ -0.57
CUBN-204ENST00000438254 POLR3DP05423 398 aaPredicted RBP11.46□□□□□ -0.57
CUBN-204ENST00000438254 RASA1P20936 1047 aa11.46□□□□□ -0.57
CUBN-204ENST00000438254 MCM5P33992 734 aa11.46□□□□□ -0.57
CUBN-204ENST00000438254 MAP3K10Q02779 954 aa11.46□□□□□ -0.57
CUBN-204ENST00000438254 TCP10Q12799 353 aa11.46□□□□□ -0.57
CUBN-204ENST00000438254 SLC44A5Q8NCS7 719 aa11.46□□□□□ -0.57
CUBN-204ENST00000438254 IGDCC4Q8TDY8 1250 aa11.46□□□□□ -0.57
CUBN-204ENST00000438254 TCEANC2Q96MN5 208 aa11.46□□□□□ -0.57
CUBN-204ENST00000438254 TEPSINQ96N21 525 aa11.46□□□□□ -0.57
CUBN-204ENST00000438254 ADARB2Q9NS39 739 aaKnown RBP11.46□□□□□ -0.57
CUBN-204ENST00000438254 PDRG1Q9NUG6 133 aa11.46□□□□□ -0.57
CUBN-204ENST00000438254 TMOD2Q9NZR1 351 aa11.46□□□□□ -0.57
CUBN-204ENST00000438254 PLIN4Q96Q06 1357 aa11.45□□□□□ -0.58
CUBN-204ENST00000438254 PITPNM2Q9BZ72 1349 aa11.45□□□□□ -0.58
CUBN-204ENST00000438254 TCP10L2B9ZVM9 353 aa11.45□□□□□ -0.58
CUBN-204ENST00000438254 PRC1O43663 620 aa11.45□□□□□ -0.58
CUBN-204ENST00000438254 KDM4AO75164 1064 aa11.45□□□□□ -0.58
CUBN-204ENST00000438254 PRDM1O75626 825 aa11.45□□□□□ -0.58
CUBN-204ENST00000438254 SLC3A2P08195 630 aaKnown RBP11.45□□□□□ -0.58
CUBN-204ENST00000438254 SLURP2P0DP57 97 aa11.45□□□□□ -0.58
CUBN-204ENST00000438254 SHMT1P34896 483 aa11.45□□□□□ -0.58
CUBN-204ENST00000438254 NOVP48745 357 aa11.45□□□□□ -0.58
CUBN-204ENST00000438254 CDK8P49336 464 aa11.45□□□□□ -0.58
CUBN-204ENST00000438254 MCM2P49736 904 aa11.45□□□□□ -0.58
CUBN-204ENST00000438254 PDE4BQ07343 736 aa11.45□□□□□ -0.58
CUBN-204ENST00000438254 TRDNQ13061 729 aa11.45□□□□□ -0.58
CUBN-204ENST00000438254 SEC23AQ15436 765 aa11.45□□□□□ -0.58
CUBN-204ENST00000438254 SLC4A8Q2Y0W8 1093 aa11.45□□□□□ -0.58
CUBN-204ENST00000438254 RBM26Q5T8P6 1007 aaKnown RBP11.45□□□□□ -0.58
CUBN-204ENST00000438254 RALYLQ86SE5 291 aaKnown RBP11.45□□□□□ -0.58
CUBN-204ENST00000438254 AMOTL1Q8IY63 956 aa11.45□□□□□ -0.58
CUBN-204ENST00000438254 ESR2Q92731 530 aa11.45□□□□□ -0.58
CUBN-204ENST00000438254 IPO9Q96P70 1041 aaKnown RBP11.45□□□□□ -0.58
CUBN-204ENST00000438254 PI4KBQ9UBF8 816 aa11.45□□□□□ -0.58
CUBN-204ENST00000438254 SERPINB13Q9UIV8 391 aa11.45□□□□□ -0.58
CUBN-204ENST00000438254 HACL1Q9UJ83 578 aa11.45□□□□□ -0.58
CUBN-204ENST00000438254 STK24Q9Y6E0 443 aa11.45□□□□□ -0.58
CUBN-204ENST00000438254 K7ELQ4 463 aaPredicted RBP11.44□□□□□ -0.58
CUBN-204ENST00000438254 SH2B2O14492 632 aaPredicted RBP11.44□□□□□ -0.58
CUBN-204ENST00000438254 ECM2O94769 699 aaPredicted RBP11.44□□□□□ -0.58
CUBN-204ENST00000438254 HLA-DOAP06340 250 aa11.44□□□□□ -0.58
CUBN-204ENST00000438254 CUL4AQ13619 759 aa11.44□□□□□ -0.58
CUBN-204ENST00000438254 TATDN1Q6P1N9 297 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms