RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 LRP2BPQ9P2M1 347 aa13.18□□□□□ -0.3
HMGCL-204ENST00000436439 MYH1P12882 1939 aa13.17□□□□□ -0.3
HMGCL-204ENST00000436439 CYP2E1P05181 493 aaPredicted RBP13.17□□□□□ -0.3
HMGCL-204ENST00000436439 GRK4P32298 578 aa13.17□□□□□ -0.3
HMGCL-204ENST00000436439 TTC39AQ5SRH9 613 aa13.17□□□□□ -0.3
HMGCL-204ENST00000436439 TREML2Q5T2D2 321 aa13.17□□□□□ -0.3
HMGCL-204ENST00000436439 TEX11Q8IYF3 940 aa13.17□□□□□ -0.3
HMGCL-204ENST00000436439 RAET1EQ8TD07 263 aa13.17□□□□□ -0.3
HMGCL-204ENST00000436439 EVI5LQ96CN4 794 aa13.17□□□□□ -0.3
HMGCL-204ENST00000436439 HAUS7Q99871 368 aa13.17□□□□□ -0.3
HMGCL-204ENST00000436439 AATFQ9NY61 560 aaKnown RBP eCLIP13.17□□□□□ -0.3
HMGCL-204ENST00000436439 SLC45A1Q9Y2W3 748 aa13.17□□□□□ -0.3
HMGCL-204ENST00000436439 TRIM6-TRIM34B2RNG4 842 aa13.16□□□□□ -0.3
HMGCL-204ENST00000436439 MAP4K4O95819 1239 aaPredicted RBP13.16□□□□□ -0.3
HMGCL-204ENST00000436439 HOXD10P28358 340 aa13.16□□□□□ -0.3
HMGCL-204ENST00000436439 ZAP70P43403 619 aa13.16□□□□□ -0.3
HMGCL-204ENST00000436439 FCGRTP55899 365 aa13.16□□□□□ -0.3
HMGCL-204ENST00000436439 DDRGK1Q96HY6 314 aa13.16□□□□□ -0.3
HMGCL-204ENST00000436439 AGTPBP1Q9UPW5 1226 aa13.16□□□□□ -0.3
HMGCL-204ENST00000436439 PLXNB2O15031 1838 aa13.16□□□□□ -0.3
HMGCL-204ENST00000436439 CAP2P40123 477 aa13.15□□□□□ -0.3
HMGCL-204ENST00000436439 JAG1P78504 1218 aa13.15□□□□□ -0.3
HMGCL-204ENST00000436439 SPP2Q13103 211 aa13.15□□□□□ -0.3
HMGCL-204ENST00000436439 HABP4Q5JVS0 413 aaKnown RBP13.15□□□□□ -0.3
HMGCL-204ENST00000436439 NAA16Q6N069 864 aaPredicted RBP13.15□□□□□ -0.3
HMGCL-204ENST00000436439 CASC1Q6TDU7 716 aa13.15□□□□□ -0.3
HMGCL-204ENST00000436439 RILPL2Q969X0 211 aa13.15□□□□□ -0.3
HMGCL-204ENST00000436439 BOLA2Q9H3K6 86 aa13.15□□□□□ -0.3
HMGCL-204ENST00000436439 DNAJC18Q9H819 358 aa13.15□□□□□ -0.3
HMGCL-204ENST00000436439 PIH1D3Q9NQM4 214 aaKnown RBP13.15□□□□□ -0.3
HMGCL-204ENST00000436439 CCL5P13501 91 aa13.14□□□□□ -0.31
HMGCL-204ENST00000436439 SHROOM1Q2M3G4 852 aaPredicted RBP13.14□□□□□ -0.31
HMGCL-204ENST00000436439 MAPKAPK5Q8IW41 473 aa13.14□□□□□ -0.31
HMGCL-204ENST00000436439 ANKRD13CQ8N6S4 541 aa13.14□□□□□ -0.31
HMGCL-204ENST00000436439 PROCA1Q8NCQ7 364 aaPredicted RBP13.14□□□□□ -0.31
HMGCL-204ENST00000436439 SMCR8Q8TEV9 937 aaPredicted RBP13.14□□□□□ -0.31
HMGCL-204ENST00000436439 TGFBRAP1Q8WUH2 860 aa13.14□□□□□ -0.31
HMGCL-204ENST00000436439 NDUFB9Q9Y6M9 179 aa13.14□□□□□ -0.31
HMGCL-204ENST00000436439 FLT1P17948 1338 aa13.13□□□□□ -0.31
HMGCL-204ENST00000436439 HIP1O00291 1037 aa13.13□□□□□ -0.31
HMGCL-204ENST00000436439 ELNP15502 786 aa13.13□□□□□ -0.31
HMGCL-204ENST00000436439 CHMLP26374 656 aa13.13□□□□□ -0.31
HMGCL-204ENST00000436439 FLT3LGP49771 235 aa13.13□□□□□ -0.31
HMGCL-204ENST00000436439 HMGCS2P54868 508 aa13.13□□□□□ -0.31
HMGCL-204ENST00000436439 PPP4CP60510 307 aa13.13□□□□□ -0.31
HMGCL-204ENST00000436439 DYNLL1P63167 89 aaKnown RBP13.13□□□□□ -0.31
HMGCL-204ENST00000436439 ZNF280CQ8ND82 737 aa13.13□□□□□ -0.31
HMGCL-204ENST00000436439 NOL10Q9BSC4 688 aaKnown RBP13.13□□□□□ -0.31
HMGCL-204ENST00000436439 HERC5Q9UII4 1024 aaKnown RBP13.13□□□□□ -0.31
HMGCL-204ENST00000436439 USP17L5A8MUK1 530 aa13.12□□□□□ -0.31
HMGCL-204ENST00000436439 TNPO2O14787 897 aaKnown RBP13.12□□□□□ -0.31
HMGCL-204ENST00000436439 ADCY3O60266 1144 aa13.12□□□□□ -0.31
HMGCL-204ENST00000436439 BAG3O95817 575 aa13.12□□□□□ -0.31
HMGCL-204ENST00000436439 GJA8P48165 433 aa13.12□□□□□ -0.31
HMGCL-204ENST00000436439 SH3D19Q5HYK7 790 aa13.12□□□□□ -0.31
HMGCL-204ENST00000436439 SLAIN1Q8ND83 568 aa13.12□□□□□ -0.31
HMGCL-204ENST00000436439 RNF208Q9H0X6 261 aa13.12□□□□□ -0.31
HMGCL-204ENST00000436439 UNC93B1Q9H1C4 597 aa13.12□□□□□ -0.31
HMGCL-204ENST00000436439 PAG1Q9NWQ8 432 aa13.12□□□□□ -0.31
HMGCL-204ENST00000436439 PI4KBQ9UBF8 816 aa13.12□□□□□ -0.31
HMGCL-204ENST00000436439 BIN2Q9UBW5 565 aaPredicted RBP13.12□□□□□ -0.31
HMGCL-204ENST00000436439 PALD1Q9ULE6 856 aa13.12□□□□□ -0.31
HMGCL-204ENST00000436439 ALPK3Q96L96 1907 aa13.12□□□□□ -0.31
HMGCL-204ENST00000436439 DDX60LQ5H9U9 1706 aaKnown RBP13.12□□□□□ -0.31
HMGCL-204ENST00000436439 GDF11O95390 407 aa13.11□□□□□ -0.31
HMGCL-204ENST00000436439 SEC24BO95487 1268 aa13.11□□□□□ -0.31
HMGCL-204ENST00000436439 GJB1P08034 283 aa13.11□□□□□ -0.31
HMGCL-204ENST00000436439 UBXN2AP68543 259 aa13.11□□□□□ -0.31
HMGCL-204ENST00000436439 FAM110CQ1W6H9 321 aa13.11□□□□□ -0.31
HMGCL-204ENST00000436439 UBE2Q1Q7Z7E8 422 aa13.11□□□□□ -0.31
HMGCL-204ENST00000436439 METTL16Q86W50 562 aaKnown RBP13.11□□□□□ -0.31
HMGCL-204ENST00000436439 KBTBD3Q8NAB2 608 aa13.11□□□□□ -0.31
HMGCL-204ENST00000436439 DHX36Q9H2U1 1008 aaKnown RBP13.11□□□□□ -0.31
HMGCL-204ENST00000436439 ANTXR1Q9H6X2 564 aa13.11□□□□□ -0.31
HMGCL-204ENST00000436439 PCDH10Q9P2E7 1040 aa13.11□□□□□ -0.31
HMGCL-204ENST00000436439 SAP30BPQ9UHR5 308 aaKnown RBP13.11□□□□□ -0.31
HMGCL-204ENST00000436439 PNMA3Q9UL41 463 aa13.11□□□□□ -0.31
HMGCL-204ENST00000436439 NAV1Q8NEY1 1877 aa13.1□□□□□ -0.31
HMGCL-204ENST00000436439 H0YGN5 161 aa13.1□□□□□ -0.31
HMGCL-204ENST00000436439 EPB41L2O43491 1005 aaKnown RBP13.1□□□□□ -0.31
HMGCL-204ENST00000436439 PEX10O60683 326 aa13.1□□□□□ -0.31
HMGCL-204ENST00000436439 INHAP05111 366 aa13.1□□□□□ -0.31
HMGCL-204ENST00000436439 PLCG2P16885 1265 aa13.1□□□□□ -0.31
HMGCL-204ENST00000436439 IRF5Q13568 498 aa13.1□□□□□ -0.31
HMGCL-204ENST00000436439 MTMR2Q13614 643 aa13.1□□□□□ -0.31
HMGCL-204ENST00000436439 TTF1Q15361 905 aaPredicted RBP13.1□□□□□ -0.31
HMGCL-204ENST00000436439 DNAJC2Q99543 621 aaKnown RBP13.1□□□□□ -0.31
HMGCL-204ENST00000436439 TBC1D2Q9BYX2 928 aa13.1□□□□□ -0.31
HMGCL-204ENST00000436439 ASCC2Q9H1I8 757 aaPredicted RBP13.1□□□□□ -0.31
HMGCL-204ENST00000436439 UPF2Q9HAU5 1272 aaKnown RBP13.1□□□□□ -0.31
HMGCL-204ENST00000436439 COLQQ9Y215 455 aaPredicted RBP13.1□□□□□ -0.31
HMGCL-204ENST00000436439 IDH1O75874 414 aaKnown RBP13.09□□□□□ -0.31
HMGCL-204ENST00000436439 CYP7A1P22680 504 aa13.09□□□□□ -0.31
HMGCL-204ENST00000436439 LRRFIP1Q32MZ4 808 aaKnown RBP13.09□□□□□ -0.31
HMGCL-204ENST00000436439 MIGA1Q8NAN2 632 aa13.09□□□□□ -0.31
HMGCL-204ENST00000436439 NKX2-3Q8TAU0 364 aa13.09□□□□□ -0.31
HMGCL-204ENST00000436439 PXYLP1Q8TE99 480 aa13.09□□□□□ -0.31
HMGCL-204ENST00000436439 U2AF1L4Q8WU68 220 aaKnown RBP13.09□□□□□ -0.31
HMGCL-204ENST00000436439 RUFY2Q8WXA3 655 aa13.09□□□□□ -0.31
HMGCL-204ENST00000436439 ESYT1Q9BSJ8 1104 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms