RNA–Protein interactions for RNA: ENST00000435216.1

CDCA4P4-201, Transcript of cell division cycle associated 4 pseudogene 4, humanhuman

BASIC

Gene CDCA4P4, Length 680 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P4-201ENST00000435216 BACE1P56817 501 aa15.95■□□□□ 0.14
CDCA4P4-201ENST00000435216 MAP3K12Q12852 859 aa15.95■□□□□ 0.14
CDCA4P4-201ENST00000435216 PABPC4Q13310 644 aaKnown RBP eCLIP15.95■□□□□ 0.14
CDCA4P4-201ENST00000435216 SIRT2Q8IXJ6 389 aa15.95■□□□□ 0.14
CDCA4P4-201ENST00000435216 COA7Q96BR5 231 aa15.95■□□□□ 0.14
CDCA4P4-201ENST00000435216 WDR18Q9BV38 432 aa15.95■□□□□ 0.14
CDCA4P4-201ENST00000435216 GJA8P48165 433 aa15.94■□□□□ 0.14
CDCA4P4-201ENST00000435216 U2AF1L4Q8WU68 220 aaKnown RBP15.94■□□□□ 0.14
CDCA4P4-201ENST00000435216 GCC1Q96CN9 775 aa15.94■□□□□ 0.14
CDCA4P4-201ENST00000435216 TMOD4Q9NZQ9 345 aa15.94■□□□□ 0.14
CDCA4P4-201ENST00000435216 USP17L10C9JJH3 530 aa15.93■□□□□ 0.14
CDCA4P4-201ENST00000435216 GH2P01242 217 aa15.93■□□□□ 0.14
CDCA4P4-201ENST00000435216 MS4A1P11836 297 aa15.93■□□□□ 0.14
CDCA4P4-201ENST00000435216 GCLCP48506 637 aaPredicted RBP15.93■□□□□ 0.14
CDCA4P4-201ENST00000435216 IRX3P78415 501 aaPredicted RBP15.93■□□□□ 0.14
CDCA4P4-201ENST00000435216 IRF5Q13568 498 aa15.93■□□□□ 0.14
CDCA4P4-201ENST00000435216 ZYXQ15942 572 aaKnown RBP15.93■□□□□ 0.14
CDCA4P4-201ENST00000435216 HSP90AB4PQ58FF6 505 aa15.93■□□□□ 0.14
CDCA4P4-201ENST00000435216 HABP4Q5JVS0 413 aaKnown RBP15.93■□□□□ 0.14
CDCA4P4-201ENST00000435216 NKX2-3Q8TAU0 364 aa15.93■□□□□ 0.14
CDCA4P4-201ENST00000435216 EDC3Q96F86 508 aaKnown RBP15.93■□□□□ 0.14
CDCA4P4-201ENST00000435216 DNAJC2Q99543 621 aaKnown RBP15.93■□□□□ 0.14
CDCA4P4-201ENST00000435216 P2RX7Q99572 595 aaKnown RBP15.93■□□□□ 0.14
CDCA4P4-201ENST00000435216 ZBTB40Q9NUA8 1239 aa15.93■□□□□ 0.14
CDCA4P4-201ENST00000435216 DDX19BQ9UMR2 479 aa15.93■□□□□ 0.14
CDCA4P4-201ENST00000435216 DDX60LQ5H9U9 1706 aaKnown RBP15.92■□□□□ 0.14
CDCA4P4-201ENST00000435216 H0YGN5 161 aa15.92■□□□□ 0.14
CDCA4P4-201ENST00000435216 GOLIM4O00461 696 aa15.92■□□□□ 0.14
CDCA4P4-201ENST00000435216 IGSF3O75054 1194 aa15.92■□□□□ 0.14
CDCA4P4-201ENST00000435216 EVX2Q03828 476 aa15.92■□□□□ 0.14
CDCA4P4-201ENST00000435216 RPAP2Q8IXW5 612 aaPredicted RBP15.92■□□□□ 0.14
CDCA4P4-201ENST00000435216 CLASRPQ8N2M8 674 aaKnown RBP15.92■□□□□ 0.14
CDCA4P4-201ENST00000435216 PXYLP1Q8TE99 480 aa15.92■□□□□ 0.14
CDCA4P4-201ENST00000435216 KIF1BPQ96EK5 621 aa15.92■□□□□ 0.14
CDCA4P4-201ENST00000435216 DEFB118Q96PH6 123 aa15.92■□□□□ 0.14
CDCA4P4-201ENST00000435216 RIOK1Q9BRS2 568 aaKnown RBP15.92■□□□□ 0.14
CDCA4P4-201ENST00000435216 TXNRD2Q9NNW7 524 aa15.92■□□□□ 0.14
CDCA4P4-201ENST00000435216 EMILIN3Q9NT22 766 aa15.92■□□□□ 0.14
CDCA4P4-201ENST00000435216 RCAN3Q9UKA8 241 aa15.92■□□□□ 0.14
CDCA4P4-201ENST00000435216 NAV1Q8NEY1 1877 aa15.92■□□□□ 0.14
CDCA4P4-201ENST00000435216 MAGEB6P1A0A0J9YX57 407 aa15.91■□□□□ 0.14
CDCA4P4-201ENST00000435216 C19orf81C9J6K1 198 aa15.91■□□□□ 0.14
CDCA4P4-201ENST00000435216 IFIT2P09913 472 aaKnown RBP15.91■□□□□ 0.14
CDCA4P4-201ENST00000435216 PDE6AP16499 860 aa15.91■□□□□ 0.14
CDCA4P4-201ENST00000435216 PLCD1P51178 756 aa15.91■□□□□ 0.14
CDCA4P4-201ENST00000435216 HERVK_113P62684 666 aa15.91■□□□□ 0.14
CDCA4P4-201ENST00000435216 RAB3GAP1Q15042 981 aa15.91■□□□□ 0.14
CDCA4P4-201ENST00000435216 SLC9C2Q5TAH2 1124 aa15.91■□□□□ 0.14
CDCA4P4-201ENST00000435216 C20orf194Q5TEA3 1177 aa15.91■□□□□ 0.14
CDCA4P4-201ENST00000435216 TATDN1Q6P1N9 297 aa15.91■□□□□ 0.14
CDCA4P4-201ENST00000435216 DPF3Q92784 378 aa15.91■□□□□ 0.14
CDCA4P4-201ENST00000435216 SERPINB13Q9UIV8 391 aa15.91■□□□□ 0.14
CDCA4P4-201ENST00000435216 COLQQ9Y215 455 aaPredicted RBP15.91■□□□□ 0.14
CDCA4P4-201ENST00000435216 CEP290O15078 2479 aa15.91■□□□□ 0.14
CDCA4P4-201ENST00000435216 PLXNB2O15031 1838 aa15.91■□□□□ 0.14
CDCA4P4-201ENST00000435216 ZNF532Q9HCE3 1301 aa15.91■□□□□ 0.14
CDCA4P4-201ENST00000435216 HMMRO75330 724 aa15.9■□□□□ 0.14
CDCA4P4-201ENST00000435216 SGPL1O95470 568 aa15.9■□□□□ 0.14
CDCA4P4-201ENST00000435216 HOXA7P31268 230 aaPredicted RBP15.9■□□□□ 0.14
CDCA4P4-201ENST00000435216 TRIM32Q13049 653 aa15.9■□□□□ 0.14
CDCA4P4-201ENST00000435216 TTF1Q15361 905 aaPredicted RBP15.9■□□□□ 0.14
CDCA4P4-201ENST00000435216 SLFNL1Q499Z3 407 aa15.9■□□□□ 0.14
CDCA4P4-201ENST00000435216 UBE2Q1Q7Z7E8 422 aa15.9■□□□□ 0.14
CDCA4P4-201ENST00000435216 TTC6Q86TZ1 520 aa15.9■□□□□ 0.14
CDCA4P4-201ENST00000435216 CERS3Q8IU89 383 aa15.9■□□□□ 0.14
CDCA4P4-201ENST00000435216 PAGR1Q9BTK6 254 aa15.9■□□□□ 0.14
CDCA4P4-201ENST00000435216 GINM1Q9NU53 330 aa15.9■□□□□ 0.14
CDCA4P4-201ENST00000435216 MORF4L1Q9UBU8 362 aa15.9■□□□□ 0.14
CDCA4P4-201ENST00000435216 GJD2Q9UKL4 321 aa15.9■□□□□ 0.14
CDCA4P4-201ENST00000435216 FARP2O94887 1054 aaPredicted RBP15.89■□□□□ 0.13
CDCA4P4-201ENST00000435216 TFRCP02786 760 aaKnown RBP15.89■□□□□ 0.13
CDCA4P4-201ENST00000435216 SHMT1P34896 483 aa15.89■□□□□ 0.13
CDCA4P4-201ENST00000435216 CERKLQ49MI3 558 aaPredicted RBP15.89■□□□□ 0.13
CDCA4P4-201ENST00000435216 LCORLQ8N3X6 602 aa15.89■□□□□ 0.13
CDCA4P4-201ENST00000435216 SDR42E1Q8WUS8 393 aa15.89■□□□□ 0.13
CDCA4P4-201ENST00000435216 FEZ1Q99689 392 aa15.89■□□□□ 0.13
CDCA4P4-201ENST00000435216 EHD4Q9H223 541 aa15.89■□□□□ 0.13
CDCA4P4-201ENST00000435216 BOLA2Q9H3K6 86 aa15.89■□□□□ 0.13
CDCA4P4-201ENST00000435216 RBPJLQ9UBG7 517 aa15.89■□□□□ 0.13
CDCA4P4-201ENST00000435216 TCRBV5S4A2TA0A5A2 114 aa15.88■□□□□ 0.13
CDCA4P4-201ENST00000435216 CHGBP05060 677 aa15.88■□□□□ 0.13
CDCA4P4-201ENST00000435216 POLR3DP05423 398 aaPredicted RBP15.88■□□□□ 0.13
CDCA4P4-201ENST00000435216 CYP2B6P20813 491 aa15.88■□□□□ 0.13
CDCA4P4-201ENST00000435216 ABCB5Q2M3G0 1257 aa15.88■□□□□ 0.13
CDCA4P4-201ENST00000435216 Q3C1V9 767 aa15.88■□□□□ 0.13
CDCA4P4-201ENST00000435216 USP17L2Q6R6M4 530 aa15.88■□□□□ 0.13
CDCA4P4-201ENST00000435216 POTEEQ6S8J3 1075 aa15.88■□□□□ 0.13
CDCA4P4-201ENST00000435216 GPRC5AQ8NFJ5 357 aa15.88■□□□□ 0.13
CDCA4P4-201ENST00000435216 ACER1Q8TDN7 264 aa15.88■□□□□ 0.13
CDCA4P4-201ENST00000435216 CRNKL1Q9BZJ0 848 aaKnown RBP15.88■□□□□ 0.13
CDCA4P4-201ENST00000435216 ARMT1Q9H993 441 aa15.88■□□□□ 0.13
CDCA4P4-201ENST00000435216 PAK6Q9NQU5 681 aaPredicted RBP15.88■□□□□ 0.13
CDCA4P4-201ENST00000435216 MCM9Q9NXL9 1143 aa15.88■□□□□ 0.13
CDCA4P4-201ENST00000435216 RAB11FIP3O75154 756 aa15.87■□□□□ 0.13
CDCA4P4-201ENST00000435216 HMGCRP04035 888 aa15.87■□□□□ 0.13
CDCA4P4-201ENST00000435216 CYP2D6P10635 497 aa15.87■□□□□ 0.13
CDCA4P4-201ENST00000435216 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.87■□□□□ 0.13
CDCA4P4-201ENST00000435216 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.87■□□□□ 0.13
CDCA4P4-201ENST00000435216 PORCNQ9H237 461 aa15.87■□□□□ 0.13
CDCA4P4-201ENST00000435216 PRKAB2O43741 272 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms