RNA–Protein interactions for RNA: ENST00000431873.6

ALK-202, Transcript of ALK receptor tyrosine kinase, humanhuman

TSL 5

Gene ALK, Length 2,520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-202ENST00000431873 PARD6BQ9BYG5 372 aa11.13□□□□□ -0.63
ALK-202ENST00000431873 GREM2Q9H772 168 aa11.13□□□□□ -0.63
ALK-202ENST00000431873 STRN4Q9NRL3 753 aa11.13□□□□□ -0.63
ALK-202ENST00000431873 WWC3Q9ULE0 1092 aa11.13□□□□□ -0.63
ALK-202ENST00000431873 ZNF330Q9Y3S2 320 aaPredicted RBP11.13□□□□□ -0.63
ALK-202ENST00000431873 ABCA3Q99758 1704 aa11.13□□□□□ -0.63
ALK-202ENST00000431873 AKR1B15C9JRZ8 316 aaPredicted RBP11.13□□□□□ -0.63
ALK-202ENST00000431873 GUCY1A2P33402 732 aa11.13□□□□□ -0.63
ALK-202ENST00000431873 TXLNAP40222 546 aa11.13□□□□□ -0.63
ALK-202ENST00000431873 RCAN1P53805 252 aa11.13□□□□□ -0.63
ALK-202ENST00000431873 SMC1AQ14683 1233 aaKnown RBP11.13□□□□□ -0.63
ALK-202ENST00000431873 AKNAD1Q5T1N1 836 aa11.13□□□□□ -0.63
ALK-202ENST00000431873 IFNLR1Q8IU57 520 aaPredicted RBP11.13□□□□□ -0.63
ALK-202ENST00000431873 IFNL3Q8IZI9 196 aa11.13□□□□□ -0.63
ALK-202ENST00000431873 CCDC34Q96HJ3 373 aa11.13□□□□□ -0.63
ALK-202ENST00000431873 AK7Q96M32 723 aa11.13□□□□□ -0.63
ALK-202ENST00000431873 NAPBQ9H115 298 aa11.13□□□□□ -0.63
ALK-202ENST00000431873 SAMSN1Q9NSI8 373 aaKnown RBP11.13□□□□□ -0.63
ALK-202ENST00000431873 CCDC196A0A1B0GTZ2 297 aa11.12□□□□□ -0.63
ALK-202ENST00000431873 CCDC151A5D8V7 595 aa11.12□□□□□ -0.63
ALK-202ENST00000431873 ERVV-1B6SEH8 477 aa11.12□□□□□ -0.63
ALK-202ENST00000431873 POLR3GO15318 223 aaPredicted RBP11.12□□□□□ -0.63
ALK-202ENST00000431873 DEXIO95424 95 aa11.12□□□□□ -0.63
ALK-202ENST00000431873 PHKA1P46020 1223 aa11.12□□□□□ -0.63
ALK-202ENST00000431873 SART3Q15020 963 aaKnown RBP11.12□□□□□ -0.63
ALK-202ENST00000431873 RTN1Q16799 776 aa11.12□□□□□ -0.63
ALK-202ENST00000431873 ZNF827Q17R98 1081 aa11.12□□□□□ -0.63
ALK-202ENST00000431873 TRMT44Q8IYL2 757 aaKnown RBP11.12□□□□□ -0.63
ALK-202ENST00000431873 TXLNBQ8N3L3 684 aa11.12□□□□□ -0.63
ALK-202ENST00000431873 DHX58Q96C10 678 aa11.12□□□□□ -0.63
ALK-202ENST00000431873 FUT8Q9BYC5 575 aa11.12□□□□□ -0.63
ALK-202ENST00000431873 EPC1Q9H2F5 836 aa11.12□□□□□ -0.63
ALK-202ENST00000431873 EPB41L4AQ9HCS5 686 aaPredicted RBP11.12□□□□□ -0.63
ALK-202ENST00000431873 INCENPQ9NQS7 918 aa11.12□□□□□ -0.63
ALK-202ENST00000431873 KCNJ14Q9UNX9 436 aa11.12□□□□□ -0.63
ALK-202ENST00000431873 IRS4O14654 1257 aaPredicted RBP11.12□□□□□ -0.63
ALK-202ENST00000431873 RAD21O60216 631 aa11.12□□□□□ -0.63
ALK-202ENST00000431873 PDE8AO60658 829 aa11.12□□□□□ -0.63
ALK-202ENST00000431873 GPS2Q13227 327 aa11.12□□□□□ -0.63
ALK-202ENST00000431873 TUBB2AQ13885 445 aa11.12□□□□□ -0.63
ALK-202ENST00000431873 BRD3Q15059 726 aa11.12□□□□□ -0.63
ALK-202ENST00000431873 HLFQ16534 295 aa11.12□□□□□ -0.63
ALK-202ENST00000431873 MFSD6Q6ZSS7 791 aa11.12□□□□□ -0.63
ALK-202ENST00000431873 APTXQ7Z2E3 356 aaKnown RBP11.12□□□□□ -0.63
ALK-202ENST00000431873 TMTC2Q8N394 836 aa11.12□□□□□ -0.63
ALK-202ENST00000431873 CRACR2BQ8N4Y2 399 aaPredicted RBP11.12□□□□□ -0.63
ALK-202ENST00000431873 CCDC12Q8WUD4 166 aaPredicted RBP11.12□□□□□ -0.63
ALK-202ENST00000431873 DESI2Q9BSY9 194 aa11.12□□□□□ -0.63
ALK-202ENST00000431873 TUBB2BQ9BVA1 445 aa11.12□□□□□ -0.63
ALK-202ENST00000431873 MRPL44Q9H9J2 332 aaKnown RBP11.12□□□□□ -0.63
ALK-202ENST00000431873 PCDHB6Q9Y5E3 794 aa11.12□□□□□ -0.63
ALK-202ENST00000431873 ADGRG1Q9Y653 693 aa11.12□□□□□ -0.63
ALK-202ENST00000431873 MYO5AQ9Y4I1 1855 aaKnown RBP11.12□□□□□ -0.63
ALK-202ENST00000431873 MROH5Q6ZUA9 1318 aa11.12□□□□□ -0.63
ALK-202ENST00000431873 TULP2O00295 520 aa11.11□□□□□ -0.63
ALK-202ENST00000431873 CYP19A1P11511 503 aaPredicted RBP11.11□□□□□ -0.63
ALK-202ENST00000431873 OAS2P29728 719 aaKnown RBP11.11□□□□□ -0.63
ALK-202ENST00000431873 HNRNPH2P55795 449 aaKnown RBP11.11□□□□□ -0.63
ALK-202ENST00000431873 TUBB4BP68371 445 aa11.11□□□□□ -0.63
ALK-202ENST00000431873 SPATA1Q5VX52 437 aa11.11□□□□□ -0.63
ALK-202ENST00000431873 SYNE4Q8N205 404 aa11.11□□□□□ -0.63
ALK-202ENST00000431873 LPIN2Q92539 896 aa11.11□□□□□ -0.63
ALK-202ENST00000431873 MTMR7Q9Y216 660 aa11.11□□□□□ -0.63
ALK-202ENST00000431873 GTF2E1P29083 439 aaPredicted RBP11.11□□□□□ -0.63
ALK-202ENST00000431873 PBX1P40424 430 aa11.11□□□□□ -0.63
ALK-202ENST00000431873 CTDSPL2Q05D32 466 aa11.11□□□□□ -0.63
ALK-202ENST00000431873 MAP3K12Q12852 859 aa11.11□□□□□ -0.63
ALK-202ENST00000431873 PUM3Q15397 648 aaKnown RBP11.11□□□□□ -0.63
ALK-202ENST00000431873 SRGAP1Q7Z6B7 1085 aa11.11□□□□□ -0.63
ALK-202ENST00000431873 PPFIBP1Q86W92 1011 aa11.11□□□□□ -0.63
ALK-202ENST00000431873 GRAMD1CQ8IYS0 662 aa11.11□□□□□ -0.63
ALK-202ENST00000431873 KCTD17Q8N5Z5 321 aa11.11□□□□□ -0.63
ALK-202ENST00000431873 STAG1Q8WVM7 1258 aa11.11□□□□□ -0.63
ALK-202ENST00000431873 HNRNPLLQ8WVV9 542 aaKnown RBP11.11□□□□□ -0.63
ALK-202ENST00000431873 TACC3Q9Y6A5 838 aa11.11□□□□□ -0.63
ALK-202ENST00000431873 TIAM2Q8IVF5 1701 aa11.11□□□□□ -0.63
ALK-202ENST00000431873 GSG1L2A8MUP6 293 aa11.1□□□□□ -0.63
ALK-202ENST00000431873 SEMA3EO15041 775 aa11.1□□□□□ -0.63
ALK-202ENST00000431873 MBD4O95243 580 aa11.1□□□□□ -0.63
ALK-202ENST00000431873 NR5A1Q13285 461 aa11.1□□□□□ -0.63
ALK-202ENST00000431873 MTF1Q14872 753 aa11.1□□□□□ -0.63
ALK-202ENST00000431873 WTAPQ15007 396 aa11.1□□□□□ -0.63
ALK-202ENST00000431873 KARSQ15046 597 aaKnown RBP11.1□□□□□ -0.63
ALK-202ENST00000431873 CTAGE1Q96RT6 745 aa11.1□□□□□ -0.63
ALK-202ENST00000431873 CSRNP2Q9H175 543 aa11.1□□□□□ -0.63
ALK-202ENST00000431873 AATFQ9NY61 560 aaKnown RBP eCLIP11.1□□□□□ -0.63
ALK-202ENST00000431873 ADD3Q9UEY8 706 aaKnown RBP11.1□□□□□ -0.63
ALK-202ENST00000431873 TRMT112Q9UI30 125 aaKnown RBP11.1□□□□□ -0.63
ALK-202ENST00000431873 BCL9O00512 1426 aa11.1□□□□□ -0.63
ALK-202ENST00000431873 CHD4Q14839 1912 aa11.1□□□□□ -0.63
ALK-202ENST00000431873 SOWAHDA6NJG2 315 aa11.1□□□□□ -0.63
ALK-202ENST00000431873 POTEB2H3BUK9 544 aa11.1□□□□□ -0.63
ALK-202ENST00000431873 MAP2K7O14733 419 aa11.1□□□□□ -0.63
ALK-202ENST00000431873 KIF5CO60282 957 aa11.1□□□□□ -0.63
ALK-202ENST00000431873 GNAT2P19087 354 aa11.1□□□□□ -0.63
ALK-202ENST00000431873 FGFR2P21802 821 aa11.1□□□□□ -0.63
ALK-202ENST00000431873 GPTP24298 496 aa11.1□□□□□ -0.63
ALK-202ENST00000431873 CHMP4BP1P59074 171 aa11.1□□□□□ -0.63
ALK-202ENST00000431873 CUL4BQ13620 913 aa11.1□□□□□ -0.63
ALK-202ENST00000431873 LONRF2Q1L5Z9 754 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms