RNA–Protein interactions for RNA: ENST00000431543.6

LAMA4-208, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-208ENST00000431543 APPBP2Q92624 585 aa17.11■□□□□ 0.33
LAMA4-208ENST00000431543 FSD1Q9BTV5 496 aa17.11■□□□□ 0.33
LAMA4-208ENST00000431543 SERPINB13Q9UIV8 391 aa17.11■□□□□ 0.33
LAMA4-208ENST00000431543 SLC4A4Q9Y6R1 1079 aa17.11■□□□□ 0.33
LAMA4-208ENST00000431543 DOCK1Q14185 1865 aa17.11■□□□□ 0.33
LAMA4-208ENST00000431543 PHIPQ8WWQ0 1821 aa17.1■□□□□ 0.33
LAMA4-208ENST00000431543 ZFYP08048 801 aaPredicted RBP17.1■□□□□ 0.33
LAMA4-208ENST00000431543 SPP2Q13103 211 aa17.1■□□□□ 0.33
LAMA4-208ENST00000431543 GPAT2Q6NUI2 795 aa17.1■□□□□ 0.33
LAMA4-208ENST00000431543 EHD4Q9H223 541 aa17.1■□□□□ 0.33
LAMA4-208ENST00000431543 ATP8A2Q9NTI2 1148 aa17.1■□□□□ 0.33
LAMA4-208ENST00000431543 DDX60LQ5H9U9 1706 aaKnown RBP17.1■□□□□ 0.33
LAMA4-208ENST00000431543 A0A0G2JLL6 359 aaPredicted RBP17.09■□□□□ 0.33
LAMA4-208ENST00000431543 USP17L12C9JPN9 530 aa17.09■□□□□ 0.33
LAMA4-208ENST00000431543 USP17L21D6R901 530 aa17.09■□□□□ 0.33
LAMA4-208ENST00000431543 SHMT1P34896 483 aa17.09■□□□□ 0.33
LAMA4-208ENST00000431543 GABPAQ06546 454 aa17.09■□□□□ 0.33
LAMA4-208ENST00000431543 DGKZQ13574 1117 aa17.09■□□□□ 0.33
LAMA4-208ENST00000431543 TAF1CQ15572 869 aaPredicted RBP17.09■□□□□ 0.33
LAMA4-208ENST00000431543 PRRT2Q7Z6L0 340 aaPredicted RBP17.09■□□□□ 0.33
LAMA4-208ENST00000431543 DYNLL2Q96FJ2 89 aa17.09■□□□□ 0.33
LAMA4-208ENST00000431543 NAV1Q8NEY1 1877 aa17.09■□□□□ 0.33
LAMA4-208ENST00000431543 BAZ2AQ9UIF9 1905 aaKnown RBP17.08■□□□□ 0.33
LAMA4-208ENST00000431543 ATAD5Q96QE3 1844 aa17.08■□□□□ 0.33
LAMA4-208ENST00000431543 USP17L5A8MUK1 530 aa17.08■□□□□ 0.32
LAMA4-208ENST00000431543 GSG1L2A8MUP6 293 aa17.08■□□□□ 0.32
LAMA4-208ENST00000431543 PDHXO00330 501 aa17.08■□□□□ 0.32
LAMA4-208ENST00000431543 GPAA1O43292 621 aa17.08■□□□□ 0.32
LAMA4-208ENST00000431543 CDC45O75419 566 aa17.08■□□□□ 0.32
LAMA4-208ENST00000431543 ZMYM1Q5SVZ6 1142 aa17.08■□□□□ 0.32
LAMA4-208ENST00000431543 CTR9Q6PD62 1173 aa17.08■□□□□ 0.32
LAMA4-208ENST00000431543 GADL1Q6ZQY3 521 aa17.08■□□□□ 0.32
LAMA4-208ENST00000431543 ANKRD23Q86SG2 305 aa17.08■□□□□ 0.32
LAMA4-208ENST00000431543 SLC44A5Q8NCS7 719 aa17.08■□□□□ 0.32
LAMA4-208ENST00000431543 RUFY2Q8WXA3 655 aa17.08■□□□□ 0.32
LAMA4-208ENST00000431543 DIAPH3Q9NSV4 1193 aa17.08■□□□□ 0.32
LAMA4-208ENST00000431543 ZBTB21Q9ULJ3 1066 aa17.08■□□□□ 0.32
LAMA4-208ENST00000431543 FKTNO75072 461 aa17.07■□□□□ 0.32
LAMA4-208ENST00000431543 GH2P01242 217 aa17.07■□□□□ 0.32
LAMA4-208ENST00000431543 ASNSP08243 561 aa17.07■□□□□ 0.32
LAMA4-208ENST00000431543 CAP1Q01518 475 aa17.07■□□□□ 0.32
LAMA4-208ENST00000431543 CERKLQ49MI3 558 aaPredicted RBP17.07■□□□□ 0.32
LAMA4-208ENST00000431543 NOM1Q5C9Z4 860 aaKnown RBP17.07■□□□□ 0.32
LAMA4-208ENST00000431543 C12orf60Q5U649 245 aa17.07■□□□□ 0.32
LAMA4-208ENST00000431543 ZNF280CQ8ND82 737 aa17.07■□□□□ 0.32
LAMA4-208ENST00000431543 ZFYVE28Q9HCC9 887 aa17.07■□□□□ 0.32
LAMA4-208ENST00000431543 CCDC129Q6ZRS4 1044 aa17.06■□□□□ 0.32
LAMA4-208ENST00000431543 WDR18Q9BV38 432 aa17.06■□□□□ 0.32
LAMA4-208ENST00000431543 MCOLN1Q9GZU1 580 aa17.06■□□□□ 0.32
LAMA4-208ENST00000431543 EPB41L4AQ9HCS5 686 aaPredicted RBP17.06■□□□□ 0.32
LAMA4-208ENST00000431543 CYP2C8P10632 490 aa17.05■□□□□ 0.32
LAMA4-208ENST00000431543 GUCY1A2P33402 732 aa17.05■□□□□ 0.32
LAMA4-208ENST00000431543 HMGCS2P54868 508 aa17.05■□□□□ 0.32
LAMA4-208ENST00000431543 TREML2Q5T2D2 321 aa17.05■□□□□ 0.32
LAMA4-208ENST00000431543 FASTKD5Q7L8L6 764 aaKnown RBP17.05■□□□□ 0.32
LAMA4-208ENST00000431543 ZCCHC17Q9NP64 241 aaKnown RBP17.05■□□□□ 0.32
LAMA4-208ENST00000431543 PTPRFP10586 1907 aa17.05■□□□□ 0.32
LAMA4-208ENST00000431543 PATL2C9JE40 543 aaKnown RBP17.04■□□□□ 0.32
LAMA4-208ENST00000431543 TLR2O60603 784 aa17.04■□□□□ 0.32
LAMA4-208ENST00000431543 APPP05067 770 aa17.04■□□□□ 0.32
LAMA4-208ENST00000431543 MTMR2Q13614 643 aa17.04■□□□□ 0.32
LAMA4-208ENST00000431543 ABCB5Q2M3G0 1257 aa17.04■□□□□ 0.32
LAMA4-208ENST00000431543 CTU1Q7Z7A3 348 aaKnown RBP17.04■□□□□ 0.32
LAMA4-208ENST00000431543 STK11IPQ8N1F8 1099 aa17.04■□□□□ 0.32
LAMA4-208ENST00000431543 CD99L2Q8TCZ2 262 aa17.04■□□□□ 0.32
LAMA4-208ENST00000431543 FAM227BQ96M60 508 aa17.04■□□□□ 0.32
LAMA4-208ENST00000431543 FOXP2O15409 715 aa17.03■□□□□ 0.32
LAMA4-208ENST00000431543 CDK8P49336 464 aa17.03■□□□□ 0.32
LAMA4-208ENST00000431543 SP3Q02447 781 aa17.03■□□□□ 0.32
LAMA4-208ENST00000431543 SEPT2Q15019 361 aa17.03■□□□□ 0.32
LAMA4-208ENST00000431543 RAB3GAP1Q15042 981 aa17.03■□□□□ 0.32
LAMA4-208ENST00000431543 IFFO2Q5TF58 517 aa17.03■□□□□ 0.32
LAMA4-208ENST00000431543 IFNL3Q8IZI9 196 aa17.03■□□□□ 0.32
LAMA4-208ENST00000431543 ACER1Q8TDN7 264 aa17.03■□□□□ 0.32
LAMA4-208ENST00000431543 DDRGK1Q96HY6 314 aa17.03■□□□□ 0.32
LAMA4-208ENST00000431543 AS3MTQ9HBK9 375 aa17.03■□□□□ 0.32
LAMA4-208ENST00000431543 GINM1Q9NU53 330 aa17.03■□□□□ 0.32
LAMA4-208ENST00000431543 CPA4Q9UI42 421 aa17.03■□□□□ 0.32
LAMA4-208ENST00000431543 A0A0D9SFI3 127 aa17.02■□□□□ 0.32
LAMA4-208ENST00000431543 MINDY4BA8MYZ0 360 aa17.02■□□□□ 0.32
LAMA4-208ENST00000431543 MPHOSPH10O00566 681 aaKnown RBP17.02■□□□□ 0.32
LAMA4-208ENST00000431543 CAPN15O75808 1086 aa17.02■□□□□ 0.32
LAMA4-208ENST00000431543 ECM2O94769 699 aaPredicted RBP17.02■□□□□ 0.32
LAMA4-208ENST00000431543 GNAT2P19087 354 aa17.02■□□□□ 0.32
LAMA4-208ENST00000431543 CHMLP26374 656 aa17.02■□□□□ 0.32
LAMA4-208ENST00000431543 MFAP1P55081 439 aaKnown RBP17.02■□□□□ 0.32
LAMA4-208ENST00000431543 BACE1P56817 501 aa17.02■□□□□ 0.32
LAMA4-208ENST00000431543 SBK1Q52WX2 424 aa17.02■□□□□ 0.32
LAMA4-208ENST00000431543 SH3D19Q5HYK7 790 aa17.02■□□□□ 0.32
LAMA4-208ENST00000431543 GIMAP6Q6P9H5 292 aa17.02■□□□□ 0.32
LAMA4-208ENST00000431543 C17orf99Q6UX52 265 aa17.02■□□□□ 0.32
LAMA4-208ENST00000431543 ABHD8Q96I13 439 aa17.02■□□□□ 0.32
LAMA4-208ENST00000431543 TBC1D2Q9BYX2 928 aa17.02■□□□□ 0.32
LAMA4-208ENST00000431543 AGTPBP1Q9UPW5 1226 aa17.02■□□□□ 0.32
LAMA4-208ENST00000431543 ADGRA2Q96PE1 1338 aa17.01■□□□□ 0.31
LAMA4-208ENST00000431543 USP17L10C9JJH3 530 aa17.01■□□□□ 0.31
LAMA4-208ENST00000431543 AKR1B1P15121 316 aa17.01■□□□□ 0.31
LAMA4-208ENST00000431543 TDO2P48775 406 aa17.01■□□□□ 0.31
LAMA4-208ENST00000431543 NMIQ13287 307 aaPredicted RBP17.01■□□□□ 0.31
LAMA4-208ENST00000431543 VPS53Q5VIR6 699 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms