RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 LDHBP07195 334 aaKnown RBP9.79□□□□□ -0.84
ECHDC1-207ENST00000430841 PABPC4Q13310 644 aaKnown RBP eCLIP9.79□□□□□ -0.84
ECHDC1-207ENST00000430841 CCDC27Q2M243 656 aa9.79□□□□□ -0.84
ECHDC1-207ENST00000430841 NOL9Q5SY16 702 aaKnown RBP9.79□□□□□ -0.84
ECHDC1-207ENST00000430841 BEND3Q5T5X7 828 aa9.79□□□□□ -0.84
ECHDC1-207ENST00000430841 WWC1Q8IX03 1113 aa9.79□□□□□ -0.84
ECHDC1-207ENST00000430841 CCAR1Q8IX12 1150 aaKnown RBP9.79□□□□□ -0.84
ECHDC1-207ENST00000430841 SLF2Q8IX21 1173 aa9.79□□□□□ -0.84
ECHDC1-207ENST00000430841 PXYLP1Q8TE99 480 aa9.79□□□□□ -0.84
ECHDC1-207ENST00000430841 PAWRQ96IZ0 340 aaKnown RBP9.79□□□□□ -0.84
ECHDC1-207ENST00000430841 PRKRIP1Q9H875 184 aaPredicted RBP9.79□□□□□ -0.84
ECHDC1-207ENST00000430841 ZMYND8Q9ULU4 1186 aaPredicted RBP9.79□□□□□ -0.84
ECHDC1-207ENST00000430841 ZHX2Q9Y6X8 837 aa9.79□□□□□ -0.84
ECHDC1-207ENST00000430841 TRIM75PA6NK02 468 aa9.78□□□□□ -0.84
ECHDC1-207ENST00000430841 SMAPO00193 183 aa9.78□□□□□ -0.84
ECHDC1-207ENST00000430841 HMGCRP04035 888 aa9.78□□□□□ -0.84
ECHDC1-207ENST00000430841 PPP4CP60510 307 aa9.78□□□□□ -0.84
ECHDC1-207ENST00000430841 IRF5Q13568 498 aa9.78□□□□□ -0.84
ECHDC1-207ENST00000430841 EPHA10Q5JZY3 1008 aa9.78□□□□□ -0.84
ECHDC1-207ENST00000430841 FBXO33Q7Z6M2 555 aa9.78□□□□□ -0.84
ECHDC1-207ENST00000430841 DZIP1Q86YF9 867 aaKnown RBP9.78□□□□□ -0.84
ECHDC1-207ENST00000430841 SCYL3Q8IZE3 742 aa9.78□□□□□ -0.84
ECHDC1-207ENST00000430841 ANKLE1Q8NAG6 615 aa9.78□□□□□ -0.84
ECHDC1-207ENST00000430841 MRIQ9BWK5 157 aa9.78□□□□□ -0.84
ECHDC1-207ENST00000430841 PUS3Q9BZE2 481 aaKnown RBP9.78□□□□□ -0.84
ECHDC1-207ENST00000430841 UBE2OQ9C0C9 1292 aaKnown RBP9.78□□□□□ -0.84
ECHDC1-207ENST00000430841 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.78□□□□□ -0.84
ECHDC1-207ENST00000430841 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.78□□□□□ -0.84
ECHDC1-207ENST00000430841 GABRQQ9UN88 632 aa9.78□□□□□ -0.84
ECHDC1-207ENST00000430841 RANBP2P49792 3224 aaKnown RBP9.78□□□□□ -0.84
ECHDC1-207ENST00000430841 PDE8BO95263 885 aa9.77□□□□□ -0.85
ECHDC1-207ENST00000430841 BCRP11274 1271 aa9.77□□□□□ -0.85
ECHDC1-207ENST00000430841 CTGFP29279 349 aa9.77□□□□□ -0.85
ECHDC1-207ENST00000430841 TSR1Q2NL82 804 aaKnown RBP9.77□□□□□ -0.85
ECHDC1-207ENST00000430841 APOBEC3HQ6NTF7 200 aaKnown RBP9.77□□□□□ -0.85
ECHDC1-207ENST00000430841 UBE2Q1Q7Z7E8 422 aa9.77□□□□□ -0.85
ECHDC1-207ENST00000430841 TDHQ8IZJ6 230 aa9.77□□□□□ -0.85
ECHDC1-207ENST00000430841 ZGPATQ8N5A5 531 aaKnown RBP9.77□□□□□ -0.85
ECHDC1-207ENST00000430841 SUCLG2Q96I99 432 aa9.77□□□□□ -0.85
ECHDC1-207ENST00000430841 HMX1Q9NP08 348 aaPredicted RBP9.77□□□□□ -0.85
ECHDC1-207ENST00000430841 USP40Q9NVE5 1235 aa9.77□□□□□ -0.85
ECHDC1-207ENST00000430841 STXBP5LQ9Y2K9 1186 aa9.77□□□□□ -0.85
ECHDC1-207ENST00000430841 SLC45A1Q9Y2W3 748 aa9.77□□□□□ -0.85
ECHDC1-207ENST00000430841 SALL2Q9Y467 1007 aaPredicted RBP9.77□□□□□ -0.85
ECHDC1-207ENST00000430841 KIF16BQ96L93 1317 aa9.77□□□□□ -0.85
ECHDC1-207ENST00000430841 SZT2Q5T011 3432 aa9.76□□□□□ -0.85
ECHDC1-207ENST00000430841 A0A0G2JLL6 359 aaPredicted RBP9.76□□□□□ -0.85
ECHDC1-207ENST00000430841 SOX1O00570 391 aaPredicted RBP9.76□□□□□ -0.85
ECHDC1-207ENST00000430841 EXOSC9Q06265 439 aaKnown RBP9.76□□□□□ -0.85
ECHDC1-207ENST00000430841 PDE3AQ14432 1141 aa9.76□□□□□ -0.85
ECHDC1-207ENST00000430841 GRIK5Q16478 980 aa9.76□□□□□ -0.85
ECHDC1-207ENST00000430841 PRRT2Q7Z6L0 340 aaPredicted RBP9.76□□□□□ -0.85
ECHDC1-207ENST00000430841 ANKRD13CQ8N6S4 541 aa9.76□□□□□ -0.85
ECHDC1-207ENST00000430841 LBHD1Q9BQE6 289 aaPredicted RBP9.76□□□□□ -0.85
ECHDC1-207ENST00000430841 PRO3102Q9H379 93 aa9.76□□□□□ -0.85
ECHDC1-207ENST00000430841 BICC1Q9H694 974 aaKnown RBP9.76□□□□□ -0.85
ECHDC1-207ENST00000430841 C11orf49Q9H6J7 331 aa9.76□□□□□ -0.85
ECHDC1-207ENST00000430841 IL21Q9HBE4 155 aa9.76□□□□□ -0.85
ECHDC1-207ENST00000430841 DAGLAQ9Y4D2 1042 aa9.76□□□□□ -0.85
ECHDC1-207ENST00000430841 DOCK1Q14185 1865 aa9.76□□□□□ -0.85
ECHDC1-207ENST00000430841 SYN1P17600 705 aa9.75□□□□□ -0.85
ECHDC1-207ENST00000430841 BMP8BP34820 402 aa9.75□□□□□ -0.85
ECHDC1-207ENST00000430841 GCLCP48506 637 aaPredicted RBP9.75□□□□□ -0.85
ECHDC1-207ENST00000430841 IRX3P78415 501 aaPredicted RBP9.75□□□□□ -0.85
ECHDC1-207ENST00000430841 PICALMQ13492 652 aa9.75□□□□□ -0.85
ECHDC1-207ENST00000430841 DIXDC1Q155Q3 683 aa9.75□□□□□ -0.85
ECHDC1-207ENST00000430841 FAM110CQ1W6H9 321 aa9.75□□□□□ -0.85
ECHDC1-207ENST00000430841 LRRC24Q50LG9 513 aa9.75□□□□□ -0.85
ECHDC1-207ENST00000430841 CDC42EP5Q6NZY7 148 aa9.75□□□□□ -0.85
ECHDC1-207ENST00000430841 LPIN2Q92539 896 aa9.75□□□□□ -0.85
ECHDC1-207ENST00000430841 EPAS1Q99814 870 aa9.75□□□□□ -0.85
ECHDC1-207ENST00000430841 TRIM34Q9BYJ4 488 aa9.75□□□□□ -0.85
ECHDC1-207ENST00000430841 PAK6Q9NQU5 681 aaPredicted RBP9.75□□□□□ -0.85
ECHDC1-207ENST00000430841 PRKAG2Q9UGJ0 569 aa9.75□□□□□ -0.85
ECHDC1-207ENST00000430841 ZNF112Q9UJU3 913 aa9.75□□□□□ -0.85
ECHDC1-207ENST00000430841 AGTPBP1Q9UPW5 1226 aa9.75□□□□□ -0.85
ECHDC1-207ENST00000430841 CTNND1O60716 968 aaKnown RBP9.74□□□□□ -0.85
ECHDC1-207ENST00000430841 VAMP4O75379 141 aa9.74□□□□□ -0.85
ECHDC1-207ENST00000430841 PTPRAP18433 802 aa9.74□□□□□ -0.85
ECHDC1-207ENST00000430841 MAGEA10P43363 369 aaPredicted RBP9.74□□□□□ -0.85
ECHDC1-207ENST00000430841 RGS3P49796 1198 aa9.74□□□□□ -0.85
ECHDC1-207ENST00000430841 SPTY2D1Q68D10 685 aaPredicted RBP9.74□□□□□ -0.85
ECHDC1-207ENST00000430841 GPAT2Q6NUI2 795 aa9.74□□□□□ -0.85
ECHDC1-207ENST00000430841 Q7L0L9 218 aa9.74□□□□□ -0.85
ECHDC1-207ENST00000430841 WDR63Q8IWG1 891 aa9.74□□□□□ -0.85
ECHDC1-207ENST00000430841 NOL10Q9BSC4 688 aaKnown RBP9.74□□□□□ -0.85
ECHDC1-207ENST00000430841 DENND2AQ9ULE3 1009 aa9.74□□□□□ -0.85
ECHDC1-207ENST00000430841 RPTORQ8N122 1335 aa9.74□□□□□ -0.85
ECHDC1-207ENST00000430841 A0A0C4DFX4 3053 aa9.74□□□□□ -0.85
ECHDC1-207ENST00000430841 DDX60LQ5H9U9 1706 aaKnown RBP9.73□□□□□ -0.85
ECHDC1-207ENST00000430841 ENTPD3O75355 529 aa9.73□□□□□ -0.85
ECHDC1-207ENST00000430841 ZKSCAN1P17029 563 aaPredicted RBP9.73□□□□□ -0.85
ECHDC1-207ENST00000430841 NFIAQ12857 509 aa9.73□□□□□ -0.85
ECHDC1-207ENST00000430841 CAMK2BQ13554 666 aa9.73□□□□□ -0.85
ECHDC1-207ENST00000430841 ATP2B3Q16720 1220 aa9.73□□□□□ -0.85
ECHDC1-207ENST00000430841 LRIT3Q3SXY7 679 aa9.73□□□□□ -0.85
ECHDC1-207ENST00000430841 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.73□□□□□ -0.85
ECHDC1-207ENST00000430841 TRMT44Q8IYL2 757 aaKnown RBP9.73□□□□□ -0.85
ECHDC1-207ENST00000430841 PROCA1Q8NCQ7 364 aaPredicted RBP9.73□□□□□ -0.85
ECHDC1-207ENST00000430841 DIS3LQ8TF46 1054 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms