RNA–Protein interactions for RNA: ENST00000429553.5

SH2D3C-206, Transcript of SH2 domain containing 3C, humanhuman

TSL 1 (best) BASIC

Gene SH2D3C, Length 2,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3C-206ENST00000429553 CCDC13Q8IYE1 715 aa17.06■□□□□ 0.32
SH2D3C-206ENST00000429553 MFAP3LO75121 409 aa17.06■□□□□ 0.32
SH2D3C-206ENST00000429553 PDE6BP35913 854 aa17.06■□□□□ 0.32
SH2D3C-206ENST00000429553 MRPS25P82663 173 aaKnown RBP17.06■□□□□ 0.32
SH2D3C-206ENST00000429553 FKBP15Q5T1M5 1219 aa17.06■□□□□ 0.32
SH2D3C-206ENST00000429553 SND1Q7KZF4 910 aaKnown RBP eCLIP17.06■□□□□ 0.32
SH2D3C-206ENST00000429553 FMNL3Q8IVF7 1028 aa17.06■□□□□ 0.32
SH2D3C-206ENST00000429553 GRAMD1CQ8IYS0 662 aa17.06■□□□□ 0.32
SH2D3C-206ENST00000429553 SH2D3CQ8N5H7 860 aa17.06■□□□□ 0.32
SH2D3C-206ENST00000429553 NAA15Q9BXJ9 866 aaKnown RBP17.06■□□□□ 0.32
SH2D3C-206ENST00000429553 SLC40A1Q9NP59 571 aa17.06■□□□□ 0.32
SH2D3C-206ENST00000429553 N4BP2Q86UW6 1770 aaPredicted RBP17.06■□□□□ 0.32
SH2D3C-206ENST00000429553 EME2A4GXA9 379 aaPredicted RBP17.06■□□□□ 0.32
SH2D3C-206ENST00000429553 SMTNP53814 917 aa17.06■□□□□ 0.32
SH2D3C-206ENST00000429553 KIF23Q02241 960 aaPredicted RBP17.06■□□□□ 0.32
SH2D3C-206ENST00000429553 TRAPPC11Q7Z392 1133 aa17.06■□□□□ 0.32
SH2D3C-206ENST00000429553 FAM228AQ86W67 206 aa17.06■□□□□ 0.32
SH2D3C-206ENST00000429553 NUTM2AQ8IVF1 878 aaPredicted RBP17.06■□□□□ 0.32
SH2D3C-206ENST00000429553 MARF1Q9Y4F3 1742 aaKnown RBP17.05■□□□□ 0.32
SH2D3C-206ENST00000429553 ATP1A1P05023 1023 aaKnown RBP17.05■□□□□ 0.32
SH2D3C-206ENST00000429553 RPSAP08865 295 aaKnown RBP17.05■□□□□ 0.32
SH2D3C-206ENST00000429553 CDC25AP30304 524 aa17.05■□□□□ 0.32
SH2D3C-206ENST00000429553 SF3B2Q13435 895 aaKnown RBP17.05■□□□□ 0.32
SH2D3C-206ENST00000429553 TTMPQ5BVD1 217 aa17.05■□□□□ 0.32
SH2D3C-206ENST00000429553 KCTD16Q68DU8 428 aa17.05■□□□□ 0.32
SH2D3C-206ENST00000429553 BRAPQ7Z569 592 aa17.05■□□□□ 0.32
SH2D3C-206ENST00000429553 ENOX1Q8TC92 643 aaKnown RBP17.05■□□□□ 0.32
SH2D3C-206ENST00000429553 AIFM3Q96NN9 605 aa17.05■□□□□ 0.32
SH2D3C-206ENST00000429553 AGXT2Q9BYV1 514 aa17.05■□□□□ 0.32
SH2D3C-206ENST00000429553 RNF225M0QZC1 329 aaPredicted RBP17.05■□□□□ 0.32
SH2D3C-206ENST00000429553 HMGB1P09429 215 aaKnown RBP17.05■□□□□ 0.32
SH2D3C-206ENST00000429553 ERCC3P19447 782 aa17.05■□□□□ 0.32
SH2D3C-206ENST00000429553 CALRP27797 417 aaKnown RBP17.05■□□□□ 0.32
SH2D3C-206ENST00000429553 APTXQ7Z2E3 356 aaKnown RBP17.05■□□□□ 0.32
SH2D3C-206ENST00000429553 VCPKMTQ9H867 229 aa17.05■□□□□ 0.32
SH2D3C-206ENST00000429553 KCNH3Q9ULD8 1083 aa17.05■□□□□ 0.32
SH2D3C-206ENST00000429553 CACNA1FO60840 1977 aa17.04■□□□□ 0.32
SH2D3C-206ENST00000429553 GYPCP04921 128 aa17.04■□□□□ 0.32
SH2D3C-206ENST00000429553 MCM3P25205 808 aa17.04■□□□□ 0.32
SH2D3C-206ENST00000429553 NAA25Q14CX7 972 aa17.04■□□□□ 0.32
SH2D3C-206ENST00000429553 MCMDC2Q4G0Z9 681 aa17.04■□□□□ 0.32
SH2D3C-206ENST00000429553 DDX46Q7L014 1031 aaKnown RBP17.04■□□□□ 0.32
SH2D3C-206ENST00000429553 ZNF274Q96GC6 653 aaPredicted RBP17.04■□□□□ 0.32
SH2D3C-206ENST00000429553 SCLT1Q96NL6 688 aa17.04■□□□□ 0.32
SH2D3C-206ENST00000429553 CCDC9Q9Y3X0 531 aaKnown RBP17.04■□□□□ 0.32
SH2D3C-206ENST00000429553 GNAT3A8MTJ3 354 aa17.04■□□□□ 0.32
SH2D3C-206ENST00000429553 E7EWF7 191 aa17.04■□□□□ 0.32
SH2D3C-206ENST00000429553 PPP1R12BO60237 982 aaPredicted RBP17.04■□□□□ 0.32
SH2D3C-206ENST00000429553 NAP1L1P55209 391 aaKnown RBP17.04■□□□□ 0.32
SH2D3C-206ENST00000429553 STX17P56962 302 aa17.04■□□□□ 0.32
SH2D3C-206ENST00000429553 IRX1P78414 480 aaPredicted RBP17.04■□□□□ 0.32
SH2D3C-206ENST00000429553 IFT88Q13099 833 aa17.04■□□□□ 0.32
SH2D3C-206ENST00000429553 NAA35Q5VZE5 725 aa17.04■□□□□ 0.32
SH2D3C-206ENST00000429553 ZNF185O15231 689 aa17.03■□□□□ 0.32
SH2D3C-206ENST00000429553 MDM2Q00987 491 aaPredicted RBP17.03■□□□□ 0.32
SH2D3C-206ENST00000429553 PPARDQ03181 441 aa17.03■□□□□ 0.32
SH2D3C-206ENST00000429553 RESP18Q5W5W9 173 aa17.03■□□□□ 0.32
SH2D3C-206ENST00000429553 STK11IPQ8N1F8 1099 aa17.03■□□□□ 0.32
SH2D3C-206ENST00000429553 ATXN2Q99700 1313 aaKnown RBP17.03■□□□□ 0.32
SH2D3C-206ENST00000429553 LAMA4Q16363 1823 aa17.03■□□□□ 0.32
SH2D3C-206ENST00000429553 SEC24CP53992 1094 aa17.03■□□□□ 0.32
SH2D3C-206ENST00000429553 GUCY1A3Q02108 690 aa17.03■□□□□ 0.32
SH2D3C-206ENST00000429553 KLHL10Q6JEL2 608 aa17.03■□□□□ 0.32
SH2D3C-206ENST00000429553 ZNF483Q8TF39 744 aaPredicted RBP17.03■□□□□ 0.32
SH2D3C-206ENST00000429553 EYA1Q99502 592 aa17.03■□□□□ 0.32
SH2D3C-206ENST00000429553 SEC31BQ9NQW1 1179 aa17.03■□□□□ 0.32
SH2D3C-206ENST00000429553 RBM28Q9NW13 759 aaKnown RBP17.03■□□□□ 0.32
SH2D3C-206ENST00000429553 MYH8P13535 1937 aa17.02■□□□□ 0.32
SH2D3C-206ENST00000429553 PDE2AO00408 941 aaPredicted RBP17.02■□□□□ 0.32
SH2D3C-206ENST00000429553 EZH2Q15910 746 aaKnown RBP17.02■□□□□ 0.32
SH2D3C-206ENST00000429553 HDAC7Q8WUI4 952 aa17.02■□□□□ 0.32
SH2D3C-206ENST00000429553 KAZALD1Q96I82 304 aa17.02■□□□□ 0.32
SH2D3C-206ENST00000429553 SUCLG2Q96I99 432 aa17.02■□□□□ 0.32
SH2D3C-206ENST00000429553 SAR1BQ9Y6B6 198 aa17.02■□□□□ 0.32
SH2D3C-206ENST00000429553 TARSL2A2RTX5 802 aaKnown RBP17.02■□□□□ 0.31
SH2D3C-206ENST00000429553 KLHL33A6NCF5 533 aa17.02■□□□□ 0.31
SH2D3C-206ENST00000429553 CDR1P51861 262 aa17.02■□□□□ 0.31
SH2D3C-206ENST00000429553 C2orf54Q08AI8 447 aa17.02■□□□□ 0.31
SH2D3C-206ENST00000429553 SEMA3FQ13275 785 aa17.02■□□□□ 0.31
SH2D3C-206ENST00000429553 PTPAQ15257 358 aa17.02■□□□□ 0.31
SH2D3C-206ENST00000429553 AENQ8WTP8 325 aaKnown RBP17.02■□□□□ 0.31
SH2D3C-206ENST00000429553 WWC3Q9ULE0 1092 aa17.02■□□□□ 0.31
SH2D3C-206ENST00000429553 SBNO1A3KN83 1393 aa17.02■□□□□ 0.31
SH2D3C-206ENST00000429553 USP54Q70EL1 1684 aa17.01■□□□□ 0.31
SH2D3C-206ENST00000429553 GOLGA8KD6RF30 607 aa17.01■□□□□ 0.31
SH2D3C-206ENST00000429553 GRIK3Q13003 919 aa17.01■□□□□ 0.31
SH2D3C-206ENST00000429553 SNCBQ16143 134 aa17.01■□□□□ 0.31
SH2D3C-206ENST00000429553 TSEN2Q8NCE0 465 aaKnown RBP17.01■□□□□ 0.31
SH2D3C-206ENST00000429553 PHF8Q9UPP1 1060 aa17.01■□□□□ 0.31
SH2D3C-206ENST00000429553 A0A1B0GUA9 196 aa17.01■□□□□ 0.31
SH2D3C-206ENST00000429553 PBX1P40424 430 aa17.01■□□□□ 0.31
SH2D3C-206ENST00000429553 SKOR1P84550 965 aa17.01■□□□□ 0.31
SH2D3C-206ENST00000429553 SPRED3Q2MJR0 410 aa17.01■□□□□ 0.31
SH2D3C-206ENST00000429553 NBPF14Q5TI25 921 aa17.01■□□□□ 0.31
SH2D3C-206ENST00000429553 MYO1AQ9UBC5 1043 aa17.01■□□□□ 0.31
SH2D3C-206ENST00000429553 FAM184BQ9ULE4 1060 aa17.01■□□□□ 0.31
SH2D3C-206ENST00000429553 RGPD1P0DJD0 1748 aa17.01■□□□□ 0.31
SH2D3C-206ENST00000429553 TMCO5BA8MYB1 307 aa17■□□□□ 0.31
SH2D3C-206ENST00000429553 COBLO75128 1261 aa17■□□□□ 0.31
SH2D3C-206ENST00000429553 LSP1P33241 339 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms