RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 FBXO11Q86XK2 927 aa19.29■□□□□ 0.68
SMARCA4-203ENST00000429416 SNAP23O00161 211 aa19.29■□□□□ 0.68
SMARCA4-203ENST00000429416 EP400NLQ6ZTU2 488 aa19.29■□□□□ 0.68
SMARCA4-203ENST00000429416 PPP2R5BQ15173 497 aa19.29■□□□□ 0.68
SMARCA4-203ENST00000429416 ATP10DQ9P241 1426 aa19.29■□□□□ 0.68
SMARCA4-203ENST00000429416 CCDC172P0C7W6 258 aa19.29■□□□□ 0.68
SMARCA4-203ENST00000429416 STX17P56962 302 aa19.29■□□□□ 0.68
SMARCA4-203ENST00000429416 STRN3Q13033 797 aa19.29■□□□□ 0.68
SMARCA4-203ENST00000429416 FNBP1Q96RU3 617 aa19.29■□□□□ 0.68
SMARCA4-203ENST00000429416 ANTXR1Q9H6X2 564 aa19.29■□□□□ 0.68
SMARCA4-203ENST00000429416 USP25Q9UHP3 1055 aa19.29■□□□□ 0.68
SMARCA4-203ENST00000429416 PDE4DQ08499 809 aa19.29■□□□□ 0.68
SMARCA4-203ENST00000429416 METTL13Q8N6R0 699 aa19.29■□□□□ 0.68
SMARCA4-203ENST00000429416 TRPC6Q9Y210 931 aa19.29■□□□□ 0.68
SMARCA4-203ENST00000429416 SPATA31A5Q5VU36 1347 aa19.28■□□□□ 0.68
SMARCA4-203ENST00000429416 SPATA31A7Q8IWB4 1347 aa19.28■□□□□ 0.68
SMARCA4-203ENST00000429416 PRPF4BQ13523 1007 aaKnown RBP19.28■□□□□ 0.68
SMARCA4-203ENST00000429416 HSP90AA2PQ14568 343 aaPredicted RBP19.28■□□□□ 0.68
SMARCA4-203ENST00000429416 PSTPIP2Q9H939 334 aa19.28■□□□□ 0.68
SMARCA4-203ENST00000429416 GCOM1H8Y6P7 765 aaPredicted RBP19.28■□□□□ 0.68
SMARCA4-203ENST00000429416 POLR2MP0CAP2 368 aa19.28■□□□□ 0.68
SMARCA4-203ENST00000429416 TTC38Q5R3I4 469 aa19.28■□□□□ 0.68
SMARCA4-203ENST00000429416 IQCEQ6IPM2 695 aa19.28■□□□□ 0.68
SMARCA4-203ENST00000429416 RNF169Q8NCN4 708 aa19.28■□□□□ 0.68
SMARCA4-203ENST00000429416 RGS22Q8NE09 1264 aa19.28■□□□□ 0.68
SMARCA4-203ENST00000429416 LRWD1Q9UFC0 647 aa19.28■□□□□ 0.68
SMARCA4-203ENST00000429416 SPHKAPQ2M3C7 1700 aa19.28■□□□□ 0.68
SMARCA4-203ENST00000429416 AKR1B10O60218 316 aa19.28■□□□□ 0.68
SMARCA4-203ENST00000429416 ARID5AQ03989 594 aa19.28■□□□□ 0.68
SMARCA4-203ENST00000429416 SNX29Q8TEQ0 813 aa19.28■□□□□ 0.68
SMARCA4-203ENST00000429416 USP14P54578 494 aa19.27■□□□□ 0.68
SMARCA4-203ENST00000429416 C8orf34Q49A92 452 aa19.27■□□□□ 0.68
SMARCA4-203ENST00000429416 GPR108Q9NPR9 543 aa19.27■□□□□ 0.68
SMARCA4-203ENST00000429416 PTCH1Q13635 1447 aa19.27■□□□□ 0.68
SMARCA4-203ENST00000429416 GAS7O60861 476 aa19.27■□□□□ 0.68
SMARCA4-203ENST00000429416 PLCD1P51178 756 aa19.27■□□□□ 0.68
SMARCA4-203ENST00000429416 PTPN12Q05209 780 aaKnown RBP19.27■□□□□ 0.68
SMARCA4-203ENST00000429416 RAD51AP2Q09MP3 1159 aa19.27■□□□□ 0.68
SMARCA4-203ENST00000429416 AXDND1Q5T1B0 1012 aaPredicted RBP19.27■□□□□ 0.68
SMARCA4-203ENST00000429416 CEP135Q66GS9 1140 aa19.27■□□□□ 0.68
SMARCA4-203ENST00000429416 BRIP1Q9BX63 1249 aa19.27■□□□□ 0.68
SMARCA4-203ENST00000429416 NCAPD2Q15021 1401 aa19.27■□□□□ 0.68
SMARCA4-203ENST00000429416 ARHGEF40Q8TER5 1519 aa19.27■□□□□ 0.68
SMARCA4-203ENST00000429416 CALCRLQ16602 461 aa19.27■□□□□ 0.67
SMARCA4-203ENST00000429416 RNF123Q5XPI4 1314 aa19.27■□□□□ 0.67
SMARCA4-203ENST00000429416 SWAP70Q9UH65 585 aa19.27■□□□□ 0.67
SMARCA4-203ENST00000429416 ZNF853P0CG23 659 aa19.26■□□□□ 0.67
SMARCA4-203ENST00000429416 PI4KBQ9UBF8 816 aa19.26■□□□□ 0.67
SMARCA4-203ENST00000429416 GOLGA6L10A6NI86 522 aa19.26■□□□□ 0.67
SMARCA4-203ENST00000429416 H7C1W4 665 aa19.26■□□□□ 0.67
SMARCA4-203ENST00000429416 DCAF17Q5H9S7 520 aaPredicted RBP19.26■□□□□ 0.67
SMARCA4-203ENST00000429416 MINPP1Q9UNW1 487 aa19.26■□□□□ 0.67
SMARCA4-203ENST00000429416 MCF2L2Q86YR7 1114 aa19.26■□□□□ 0.67
SMARCA4-203ENST00000429416 DIP2BQ9P265 1576 aa19.26■□□□□ 0.67
SMARCA4-203ENST00000429416 KIF5CO60282 957 aa19.26■□□□□ 0.67
SMARCA4-203ENST00000429416 SYT1P21579 422 aa19.26■□□□□ 0.67
SMARCA4-203ENST00000429416 TEX35Q5T0J7 233 aa19.26■□□□□ 0.67
SMARCA4-203ENST00000429416 CCDC112Q8NEF3 446 aa19.26■□□□□ 0.67
SMARCA4-203ENST00000429416 NBPF3Q9H094 633 aa19.26■□□□□ 0.67
SMARCA4-203ENST00000429416 DHX36Q9H2U1 1008 aaKnown RBP19.26■□□□□ 0.67
SMARCA4-203ENST00000429416 SEC24BO95487 1268 aa19.25■□□□□ 0.67
SMARCA4-203ENST00000429416 BARGINQ6ZT62 677 aa19.25■□□□□ 0.67
SMARCA4-203ENST00000429416 TDRD3Q9H7E2 651 aaKnown RBP19.25■□□□□ 0.67
SMARCA4-203ENST00000429416 ZSCAN12O43309 604 aa19.25■□□□□ 0.67
SMARCA4-203ENST00000429416 TMX1Q9H3N1 280 aa19.25■□□□□ 0.67
SMARCA4-203ENST00000429416 KIF4AO95239 1232 aa19.25■□□□□ 0.67
SMARCA4-203ENST00000429416 MECOMQ03112 1051 aa19.25■□□□□ 0.67
SMARCA4-203ENST00000429416 TPH2Q8IWU9 490 aa19.25■□□□□ 0.67
SMARCA4-203ENST00000429416 RASGRF1Q13972 1273 aa19.25■□□□□ 0.67
SMARCA4-203ENST00000429416 UTP14CQ5TAP6 766 aaKnown RBP19.25■□□□□ 0.67
SMARCA4-203ENST00000429416 LRSAM1Q6UWE0 723 aa19.25■□□□□ 0.67
SMARCA4-203ENST00000429416 KCTD1Q719H9 257 aa19.25■□□□□ 0.67
SMARCA4-203ENST00000429416 TAX1BP1Q86VP1 789 aa19.25■□□□□ 0.67
SMARCA4-203ENST00000429416 PRKAB2O43741 272 aa19.24■□□□□ 0.67
SMARCA4-203ENST00000429416 KIF4BQ2VIQ3 1234 aa19.24■□□□□ 0.67
SMARCA4-203ENST00000429416 KRT40Q6A162 431 aa19.24■□□□□ 0.67
SMARCA4-203ENST00000429416 PODNQ7Z5L7 613 aa19.24■□□□□ 0.67
SMARCA4-203ENST00000429416 PCDHA1Q9Y5I3 950 aa19.24■□□□□ 0.67
SMARCA4-203ENST00000429416 PTH1RQ03431 593 aa19.24■□□□□ 0.67
SMARCA4-203ENST00000429416 DNM3Q9UQ16 869 aa19.24■□□□□ 0.67
SMARCA4-203ENST00000429416 FRMD4BQ9Y2L6 1034 aa19.24■□□□□ 0.67
SMARCA4-203ENST00000429416 AGLP35573 1532 aa19.24■□□□□ 0.67
SMARCA4-203ENST00000429416 SSH2Q76I76 1423 aa19.24■□□□□ 0.67
SMARCA4-203ENST00000429416 GSTTP1A0A1W2PQM5 241 aa19.24■□□□□ 0.67
SMARCA4-203ENST00000429416 PRR16Q569H4 304 aa19.24■□□□□ 0.67
SMARCA4-203ENST00000429416 SPECC1Q5M775 1068 aa19.24■□□□□ 0.67
SMARCA4-203ENST00000429416 A0A1B0GVL5 298 aa19.24■□□□□ 0.67
SMARCA4-203ENST00000429416 GRIN3BO60391 1043 aa19.24■□□□□ 0.67
SMARCA4-203ENST00000429416 FMNL1O95466 1100 aaPredicted RBP19.24■□□□□ 0.67
SMARCA4-203ENST00000429416 KANSL2Q9H9L4 492 aa19.24■□□□□ 0.67
SMARCA4-203ENST00000429416 RPL13P26373 211 aaKnown RBP19.23■□□□□ 0.67
SMARCA4-203ENST00000429416 TAF3Q5VWG9 929 aa19.23■□□□□ 0.67
SMARCA4-203ENST00000429416 MIER3Q7Z3K6 550 aa19.23■□□□□ 0.67
SMARCA4-203ENST00000429416 KRT26Q7Z3Y9 468 aa19.23■□□□□ 0.67
SMARCA4-203ENST00000429416 TRAF5O00463 557 aa19.23■□□□□ 0.67
SMARCA4-203ENST00000429416 CRKP46108 304 aa19.23■□□□□ 0.67
SMARCA4-203ENST00000429416 SPAG1Q07617 926 aa19.23■□□□□ 0.67
SMARCA4-203ENST00000429416 POLA2Q14181 598 aa19.23■□□□□ 0.67
SMARCA4-203ENST00000429416 WDR70Q9NW82 654 aa19.23■□□□□ 0.67
SMARCA4-203ENST00000429416 UNC13BO14795 1591 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms