RNA–Protein interactions for RNA: ENST00000428425.1

NCBP2-205, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 1 (best)

Gene NCBP2, Length 2,220 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-205ENST00000428425 ORC4O43929 436 aa16.03■□□□□ 0.16
NCBP2-205ENST00000428425 DEXIO95424 95 aa16.03■□□□□ 0.16
NCBP2-205ENST00000428425 PKN1Q16512 942 aa16.03■□□□□ 0.16
NCBP2-205ENST00000428425 SPTY2D1Q68D10 685 aaPredicted RBP16.03■□□□□ 0.16
NCBP2-205ENST00000428425 NOSTRINQ8IVI9 506 aa16.03■□□□□ 0.16
NCBP2-205ENST00000428425 TTC12Q9H892 705 aaPredicted RBP16.03■□□□□ 0.16
NCBP2-205ENST00000428425 BAZ2BQ9UIF8 2168 aaKnown RBP16.02■□□□□ 0.16
NCBP2-205ENST00000428425 FAM205CA6NFA0 338 aa16.02■□□□□ 0.16
NCBP2-205ENST00000428425 RCAN1P53805 252 aa16.02■□□□□ 0.16
NCBP2-205ENST00000428425 SBK1Q52WX2 424 aa16.02■□□□□ 0.16
NCBP2-205ENST00000428425 SHC4Q6S5L8 630 aa16.02■□□□□ 0.16
NCBP2-205ENST00000428425 OLFM4Q6UX06 510 aa16.02■□□□□ 0.16
NCBP2-205ENST00000428425 IQCA1Q86XH1 822 aa16.02■□□□□ 0.16
NCBP2-205ENST00000428425 SPC24Q8NBT2 197 aa16.02■□□□□ 0.16
NCBP2-205ENST00000428425 RBM17Q96I25 401 aaKnown RBP16.02■□□□□ 0.16
NCBP2-205ENST00000428425 CAMKK2Q96RR4 588 aa16.02■□□□□ 0.16
NCBP2-205ENST00000428425 ARPP21Q9UBL0 812 aaPredicted RBP16.02■□□□□ 0.16
NCBP2-205ENST00000428425 CCDC196A0A1B0GTZ2 297 aa16.02■□□□□ 0.15
NCBP2-205ENST00000428425 CTAGE5O15320 804 aa16.02■□□□□ 0.15
NCBP2-205ENST00000428425 IQCB1Q15051 598 aa16.02■□□□□ 0.15
NCBP2-205ENST00000428425 C15orf52Q6ZUT6 534 aaKnown RBP16.02■□□□□ 0.15
NCBP2-205ENST00000428425 CATIPQ7Z7H3 387 aa16.02■□□□□ 0.15
NCBP2-205ENST00000428425 WASF1Q92558 559 aa16.02■□□□□ 0.15
NCBP2-205ENST00000428425 VPS54Q9P1Q0 977 aa16.02■□□□□ 0.15
NCBP2-205ENST00000428425 GGA1Q9UJY5 639 aa16.02■□□□□ 0.15
NCBP2-205ENST00000428425 ANKRD31Q8N7Z5 1873 aa16.01■□□□□ 0.15
NCBP2-205ENST00000428425 ZBTB22O15209 634 aa16.01■□□□□ 0.15
NCBP2-205ENST00000428425 ZNF202O95125 648 aa16.01■□□□□ 0.15
NCBP2-205ENST00000428425 CMA1P23946 247 aa16.01■□□□□ 0.15
NCBP2-205ENST00000428425 USP5P45974 858 aa16.01■□□□□ 0.15
NCBP2-205ENST00000428425 RCSD1Q6JBY9 416 aa16.01■□□□□ 0.15
NCBP2-205ENST00000428425 SLC44A5Q8NCS7 719 aa16.01■□□□□ 0.15
NCBP2-205ENST00000428425 TBC1D16Q8TBP0 767 aa16.01■□□□□ 0.15
NCBP2-205ENST00000428425 SDF4Q9BRK5 362 aa16.01■□□□□ 0.15
NCBP2-205ENST00000428425 APBA3O96018 575 aa16■□□□□ 0.15
NCBP2-205ENST00000428425 PCP11498 1178 aaKnown RBP16■□□□□ 0.15
NCBP2-205ENST00000428425 HOXA10P31260 410 aaPredicted RBP16■□□□□ 0.15
NCBP2-205ENST00000428425 GRIN1Q05586 938 aa16■□□□□ 0.15
NCBP2-205ENST00000428425 STX1AQ16623 288 aa16■□□□□ 0.15
NCBP2-205ENST00000428425 C12orf60Q5U649 245 aa16■□□□□ 0.15
NCBP2-205ENST00000428425 TGFBRAP1Q8WUH2 860 aa16■□□□□ 0.15
NCBP2-205ENST00000428425 RTFDC1Q9BY42 306 aaPredicted RBP16■□□□□ 0.15
NCBP2-205ENST00000428425 V9GY48 417 aaPredicted RBP16■□□□□ 0.15
NCBP2-205ENST00000428425 LTBP1Q14766 1721 aa16■□□□□ 0.15
NCBP2-205ENST00000428425 ZNF500O60304 480 aaPredicted RBP16■□□□□ 0.15
NCBP2-205ENST00000428425 EARS2Q5JPH6 523 aaKnown RBP16■□□□□ 0.15
NCBP2-205ENST00000428425 SPECC1Q5M775 1068 aa16■□□□□ 0.15
NCBP2-205ENST00000428425 RNF26Q9BY78 433 aaPredicted RBP16■□□□□ 0.15
NCBP2-205ENST00000428425 IL17RBQ9NRM6 502 aa16■□□□□ 0.15
NCBP2-205ENST00000428425 SAP30BPQ9UHR5 308 aaKnown RBP16■□□□□ 0.15
NCBP2-205ENST00000428425 IL1R1P14778 569 aa15.99■□□□□ 0.15
NCBP2-205ENST00000428425 VEGFAP15692 232 aaPredicted RBP15.99■□□□□ 0.15
NCBP2-205ENST00000428425 ATP2B4P23634 1241 aa15.99■□□□□ 0.15
NCBP2-205ENST00000428425 PLCD1P51178 756 aa15.99■□□□□ 0.15
NCBP2-205ENST00000428425 EN1Q05925 392 aaPredicted RBP15.99■□□□□ 0.15
NCBP2-205ENST00000428425 NOM1Q5C9Z4 860 aaKnown RBP15.99■□□□□ 0.15
NCBP2-205ENST00000428425 TMTC3Q6ZXV5 915 aa15.99■□□□□ 0.15
NCBP2-205ENST00000428425 COL23A1Q86Y22 540 aaPredicted RBP15.99■□□□□ 0.15
NCBP2-205ENST00000428425 MAPKAPK5Q8IW41 473 aa15.99■□□□□ 0.15
NCBP2-205ENST00000428425 SRBD1Q8N5C6 995 aaKnown RBP15.99■□□□□ 0.15
NCBP2-205ENST00000428425 PCDHB6Q9Y5E3 794 aa15.99■□□□□ 0.15
NCBP2-205ENST00000428425 CDK5RAP2Q96SN8 1893 aa15.99■□□□□ 0.15
NCBP2-205ENST00000428425 KLRG2A4D1S0 409 aaPredicted RBP15.99■□□□□ 0.15
NCBP2-205ENST00000428425 TSPY2A6NKD2 308 aa15.99■□□□□ 0.15
NCBP2-205ENST00000428425 PPP6R2O75170 966 aa15.99■□□□□ 0.15
NCBP2-205ENST00000428425 FOXP1Q9H334 677 aaPredicted RBP15.99■□□□□ 0.15
NCBP2-205ENST00000428425 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.99■□□□□ 0.15
NCBP2-205ENST00000428425 HPSEQ9Y251 543 aa15.99■□□□□ 0.15
NCBP2-205ENST00000428425 CNTNAP5Q8WYK1 1306 aa15.99■□□□□ 0.15
NCBP2-205ENST00000428425 NAV1Q8NEY1 1877 aa15.98■□□□□ 0.15
NCBP2-205ENST00000428425 C6orf229H3BNL8 230 aa15.98■□□□□ 0.15
NCBP2-205ENST00000428425 BIN1O00499 593 aa15.98■□□□□ 0.15
NCBP2-205ENST00000428425 BBOX1O75936 387 aa15.98■□□□□ 0.15
NCBP2-205ENST00000428425 ATP2B1P20020 1258 aa15.98■□□□□ 0.15
NCBP2-205ENST00000428425 BTDP43251 543 aa15.98■□□□□ 0.15
NCBP2-205ENST00000428425 TFAP4Q01664 338 aa15.98■□□□□ 0.15
NCBP2-205ENST00000428425 PDE4BQ07343 736 aa15.98■□□□□ 0.15
NCBP2-205ENST00000428425 SAFBQ15424 915 aaKnown RBP eCLIP15.98■□□□□ 0.15
NCBP2-205ENST00000428425 DPCR1Q3MIW9 517 aa15.98■□□□□ 0.15
NCBP2-205ENST00000428425 DHX40Q8IX18 779 aaKnown RBP15.98■□□□□ 0.15
NCBP2-205ENST00000428425 C17orf53Q8N3J3 647 aaPredicted RBP15.98■□□□□ 0.15
NCBP2-205ENST00000428425 PIBF1Q8WXW3 757 aa15.98■□□□□ 0.15
NCBP2-205ENST00000428425 KCNF1Q9H3M0 494 aa15.98■□□□□ 0.15
NCBP2-205ENST00000428425 PODXL2Q9NZ53 605 aa15.98■□□□□ 0.15
NCBP2-205ENST00000428425 KIAA1468Q9P260 1216 aa15.98■□□□□ 0.15
NCBP2-205ENST00000428425 LRRC37AA6NMS7 1700 aa15.98■□□□□ 0.15
NCBP2-205ENST00000428425 WNT7AO00755 349 aa15.98■□□□□ 0.15
NCBP2-205ENST00000428425 ADAMTS3O15072 1205 aa15.98■□□□□ 0.15
NCBP2-205ENST00000428425 PLSCR1O15162 318 aa15.98■□□□□ 0.15
NCBP2-205ENST00000428425 DDAH1O94760 285 aa15.98■□□□□ 0.15
NCBP2-205ENST00000428425 MFSD14BQ5SR56 506 aa15.98■□□□□ 0.15
NCBP2-205ENST00000428425 USP17L3A6NCW0 530 aa15.97■□□□□ 0.15
NCBP2-205ENST00000428425 USP17L4A6NCW7 530 aa15.97■□□□□ 0.15
NCBP2-205ENST00000428425 PRPF3O43395 683 aaKnown RBP15.97■□□□□ 0.15
NCBP2-205ENST00000428425 SLC3A2P08195 630 aaKnown RBP15.97■□□□□ 0.15
NCBP2-205ENST00000428425 PPP4CP60510 307 aa15.97■□□□□ 0.15
NCBP2-205ENST00000428425 NPY5RQ15761 445 aa15.97■□□□□ 0.15
NCBP2-205ENST00000428425 RESP18Q5W5W9 173 aa15.97■□□□□ 0.15
NCBP2-205ENST00000428425 USP17L1Q7RTZ2 530 aa15.97■□□□□ 0.15
NCBP2-205ENST00000428425 CRAMP1Q96RY5 1269 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms