RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 ANKRD1Q15327 319 aa14.73□□□□□ -0.05
TRIM39-207ENST00000428404 SEC23AQ15436 765 aa14.73□□□□□ -0.05
TRIM39-207ENST00000428404 FAM47AQ5JRC9 791 aa14.73□□□□□ -0.05
TRIM39-207ENST00000428404 CRACR2BQ8N4Y2 399 aaPredicted RBP14.73□□□□□ -0.05
TRIM39-207ENST00000428404 NEDD1Q8NHV4 660 aa14.73□□□□□ -0.05
TRIM39-207ENST00000428404 ANKS1AQ92625 1134 aa14.73□□□□□ -0.05
TRIM39-207ENST00000428404 CCDC17Q96LX7 622 aa14.73□□□□□ -0.05
TRIM39-207ENST00000428404 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.73□□□□□ -0.05
TRIM39-207ENST00000428404 GPHNQ9NQX3 736 aaPredicted RBP14.73□□□□□ -0.05
TRIM39-207ENST00000428404 IGKV6D-41A0A0C4DH26 115 aa14.72□□□□□ -0.05
TRIM39-207ENST00000428404 FAM196BA6NMK8 535 aa14.72□□□□□ -0.05
TRIM39-207ENST00000428404 NOVP48745 357 aa14.72□□□□□ -0.05
TRIM39-207ENST00000428404 NBPF12Q5TAG4 269 aaPredicted RBP14.72□□□□□ -0.05
TRIM39-207ENST00000428404 DCPSQ96C86 337 aaKnown RBP14.72□□□□□ -0.05
TRIM39-207ENST00000428404 ZSCAN10Q96SZ4 725 aaPredicted RBP14.72□□□□□ -0.05
TRIM39-207ENST00000428404 RRAGCQ9HB90 399 aa14.72□□□□□ -0.05
TRIM39-207ENST00000428404 LY9Q9HBG7 655 aa14.72□□□□□ -0.05
TRIM39-207ENST00000428404 IL17RBQ9NRM6 502 aa14.72□□□□□ -0.05
TRIM39-207ENST00000428404 ANGEL1Q9UNK9 670 aaKnown RBP14.72□□□□□ -0.05
TRIM39-207ENST00000428404 LIMCH1Q9UPQ0 1083 aa14.72□□□□□ -0.05
TRIM39-207ENST00000428404 PLIN4Q96Q06 1357 aa14.72□□□□□ -0.05
TRIM39-207ENST00000428404 TSPY2A6NKD2 308 aa14.71□□□□□ -0.05
TRIM39-207ENST00000428404 IFIT3O14879 490 aaKnown RBP14.71□□□□□ -0.05
TRIM39-207ENST00000428404 AKR1B1P15121 316 aa14.71□□□□□ -0.05
TRIM39-207ENST00000428404 BECN1Q14457 450 aa14.71□□□□□ -0.05
TRIM39-207ENST00000428404 RRP1BQ14684 758 aaKnown RBP14.71□□□□□ -0.05
TRIM39-207ENST00000428404 CCDC178Q5BJE1 867 aa14.71□□□□□ -0.05
TRIM39-207ENST00000428404 TMEM67Q5HYA8 995 aa14.71□□□□□ -0.05
TRIM39-207ENST00000428404 RCSD1Q6JBY9 416 aa14.71□□□□□ -0.05
TRIM39-207ENST00000428404 SGMS1Q86VZ5 419 aa14.71□□□□□ -0.05
TRIM39-207ENST00000428404 IQCA1Q86XH1 822 aa14.71□□□□□ -0.05
TRIM39-207ENST00000428404 HSCBQ8IWL3 235 aa14.71□□□□□ -0.05
TRIM39-207ENST00000428404 ENAHQ8N8S7 591 aaPredicted RBP14.71□□□□□ -0.05
TRIM39-207ENST00000428404 BRF1Q92994 677 aa14.71□□□□□ -0.05
TRIM39-207ENST00000428404 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.71□□□□□ -0.05
TRIM39-207ENST00000428404 SENP2Q9HC62 589 aa14.71□□□□□ -0.05
TRIM39-207ENST00000428404 TPCN1Q9ULQ1 816 aa14.71□□□□□ -0.05
TRIM39-207ENST00000428404 PHF20L1A8MW92 1017 aa14.7□□□□□ -0.06
TRIM39-207ENST00000428404 K7ELQ4 463 aaPredicted RBP14.7□□□□□ -0.06
TRIM39-207ENST00000428404 NMT2O60551 498 aa14.7□□□□□ -0.06
TRIM39-207ENST00000428404 TSPY3P0CV98 308 aa14.7□□□□□ -0.06
TRIM39-207ENST00000428404 TSPY8P0CW00 308 aa14.7□□□□□ -0.06
TRIM39-207ENST00000428404 SART3Q15020 963 aaKnown RBP14.7□□□□□ -0.06
TRIM39-207ENST00000428404 CERKLQ49MI3 558 aaPredicted RBP14.7□□□□□ -0.06
TRIM39-207ENST00000428404 MIGA2Q7L4E1 593 aa14.7□□□□□ -0.06
TRIM39-207ENST00000428404 DGKHQ86XP1 1220 aa14.7□□□□□ -0.06
TRIM39-207ENST00000428404 SULF1Q8IWU6 871 aa14.7□□□□□ -0.06
TRIM39-207ENST00000428404 TMTC2Q8N394 836 aa14.7□□□□□ -0.06
TRIM39-207ENST00000428404 HOOK2Q96ED9 719 aa14.7□□□□□ -0.06
TRIM39-207ENST00000428404 TMX3Q96JJ7 454 aa14.7□□□□□ -0.06
TRIM39-207ENST00000428404 ZSCAN31Q96LW9 406 aaPredicted RBP14.7□□□□□ -0.06
TRIM39-207ENST00000428404 IPO9Q96P70 1041 aaKnown RBP14.7□□□□□ -0.06
TRIM39-207ENST00000428404 ZKSCAN3Q9BRR0 538 aa14.7□□□□□ -0.06
TRIM39-207ENST00000428404 LARP6Q9BRS8 491 aaKnown RBP14.7□□□□□ -0.06
TRIM39-207ENST00000428404 UBAC1Q9BSL1 405 aa14.7□□□□□ -0.06
TRIM39-207ENST00000428404 TRIM34Q9BYJ4 488 aa14.7□□□□□ -0.06
TRIM39-207ENST00000428404 BRPF3Q9ULD4 1205 aa14.7□□□□□ -0.06
TRIM39-207ENST00000428404 TNKSO95271 1327 aa14.69□□□□□ -0.06
TRIM39-207ENST00000428404 JAG1P78504 1218 aa14.69□□□□□ -0.06
TRIM39-207ENST00000428404 FGD1P98174 961 aa14.69□□□□□ -0.06
TRIM39-207ENST00000428404 APOBRQ0VD83 1088 aa14.69□□□□□ -0.06
TRIM39-207ENST00000428404 ME3Q16798 604 aa14.69□□□□□ -0.06
TRIM39-207ENST00000428404 SUPT20HL1Q3ZLR7 823 aa14.69□□□□□ -0.06
TRIM39-207ENST00000428404 EAPPQ56P03 285 aaPredicted RBP14.69□□□□□ -0.06
TRIM39-207ENST00000428404 PRAMEF18Q5VWM3 479 aa14.69□□□□□ -0.06
TRIM39-207ENST00000428404 KRT26Q7Z3Y9 468 aa14.69□□□□□ -0.06
TRIM39-207ENST00000428404 ZNF274Q96GC6 653 aaPredicted RBP14.69□□□□□ -0.06
TRIM39-207ENST00000428404 ZNF112Q9UJU3 913 aa14.69□□□□□ -0.06
TRIM39-207ENST00000428404 POLR2AP24928 1970 aaKnown RBP14.68□□□□□ -0.06
TRIM39-207ENST00000428404 ERICH2A1L162 156 aa14.68□□□□□ -0.06
TRIM39-207ENST00000428404 ADM5C9JUS6 153 aa14.68□□□□□ -0.06
TRIM39-207ENST00000428404 POTEIP0CG38 1075 aa14.68□□□□□ -0.06
TRIM39-207ENST00000428404 POTEJP0CG39 1038 aa14.68□□□□□ -0.06
TRIM39-207ENST00000428404 PDIA3P30101 505 aaKnown RBP14.68□□□□□ -0.06
TRIM39-207ENST00000428404 GUCY1A2P33402 732 aa14.68□□□□□ -0.06
TRIM39-207ENST00000428404 CUL4AQ13619 759 aa14.68□□□□□ -0.06
TRIM39-207ENST00000428404 WTAPQ15007 396 aa14.68□□□□□ -0.06
TRIM39-207ENST00000428404 DCAF15Q66K64 600 aa14.68□□□□□ -0.06
TRIM39-207ENST00000428404 DLK2Q6UY11 383 aa14.68□□□□□ -0.06
TRIM39-207ENST00000428404 USP48Q86UV5 1035 aa14.68□□□□□ -0.06
TRIM39-207ENST00000428404 NMRK2Q9NPI5 230 aa14.68□□□□□ -0.06
TRIM39-207ENST00000428404 SH2B1Q9NRF2 756 aaPredicted RBP14.68□□□□□ -0.06
TRIM39-207ENST00000428404 MTMR4Q9NYA4 1195 aa14.68□□□□□ -0.06
TRIM39-207ENST00000428404 LARGE1O95461 756 aa14.67□□□□□ -0.06
TRIM39-207ENST00000428404 CAP2P40123 477 aa14.67□□□□□ -0.06
TRIM39-207ENST00000428404 ABCB5Q2M3G0 1257 aa14.67□□□□□ -0.06
TRIM39-207ENST00000428404 SHROOM1Q2M3G4 852 aaPredicted RBP14.67□□□□□ -0.06
TRIM39-207ENST00000428404 TMEM179Q6ZVK1 233 aa14.67□□□□□ -0.06
TRIM39-207ENST00000428404 NOL8Q76FK4 1167 aaKnown RBP14.67□□□□□ -0.06
TRIM39-207ENST00000428404 CDC37L1Q7L3B6 337 aa14.67□□□□□ -0.06
TRIM39-207ENST00000428404 LDHDQ86WU2 507 aa14.67□□□□□ -0.06
TRIM39-207ENST00000428404 SIAH1Q8IUQ4 282 aa14.67□□□□□ -0.06
TRIM39-207ENST00000428404 CEP95Q96GE4 821 aa14.67□□□□□ -0.06
TRIM39-207ENST00000428404 HPS5Q9UPZ3 1129 aa14.67□□□□□ -0.06
TRIM39-207ENST00000428404 SSC5DA1L4H1 1573 aa14.67□□□□□ -0.06
TRIM39-207ENST00000428404 KLF18A0A0U1RQI7 1052 aa14.66□□□□□ -0.06
TRIM39-207ENST00000428404 PFKFB2O60825 505 aa14.66□□□□□ -0.06
TRIM39-207ENST00000428404 GH2P01242 217 aa14.66□□□□□ -0.06
TRIM39-207ENST00000428404 RCAN1P53805 252 aa14.66□□□□□ -0.06
TRIM39-207ENST00000428404 ST3GAL1Q11201 340 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms