RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 CAP2P40123 477 aa18.21■□□□□ 0.51
COL11A1-204ENST00000427239 FMR1Q06787 632 aaKnown RBP eCLIP18.21■□□□□ 0.51
COL11A1-204ENST00000427239 TTLL12Q14166 644 aaPredicted RBP18.21■□□□□ 0.51
COL11A1-204ENST00000427239 RRP12Q5JTH9 1297 aaKnown RBP18.21■□□□□ 0.51
COL11A1-204ENST00000427239 STOX1Q6ZVD7 989 aa18.21■□□□□ 0.51
COL11A1-204ENST00000427239 TBC1D32Q96NH3 1257 aa18.21■□□□□ 0.51
COL11A1-204ENST00000427239 WRNIP1Q96S55 665 aa18.21■□□□□ 0.51
COL11A1-204ENST00000427239 TM6SF1Q9BZW5 370 aa18.21■□□□□ 0.51
COL11A1-204ENST00000427239 CABP5Q9NP86 173 aa18.21■□□□□ 0.51
COL11A1-204ENST00000427239 NEDD4P46934 1319 aa18.21■□□□□ 0.51
COL11A1-204ENST00000427239 TSPY2A6NKD2 308 aa18.2■□□□□ 0.5
COL11A1-204ENST00000427239 TSPY3P0CV98 308 aa18.2■□□□□ 0.5
COL11A1-204ENST00000427239 TSPY8P0CW00 308 aa18.2■□□□□ 0.5
COL11A1-204ENST00000427239 MAP3K9P80192 1104 aa18.2■□□□□ 0.5
COL11A1-204ENST00000427239 TFAP4Q01664 338 aa18.2■□□□□ 0.5
COL11A1-204ENST00000427239 PRKG1Q13976 671 aa18.2■□□□□ 0.5
COL11A1-204ENST00000427239 ABCB5Q2M3G0 1257 aa18.2■□□□□ 0.5
COL11A1-204ENST00000427239 CST9Q5W186 159 aa18.2■□□□□ 0.5
COL11A1-204ENST00000427239 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.2■□□□□ 0.5
COL11A1-204ENST00000427239 GBA2Q9HCG7 927 aaPredicted RBP18.2■□□□□ 0.5
COL11A1-204ENST00000427239 ANGEL1Q9UNK9 670 aaKnown RBP18.2■□□□□ 0.5
COL11A1-204ENST00000427239 LAMB1P07942 1786 aa18.2■□□□□ 0.5
COL11A1-204ENST00000427239 KDM4AO75164 1064 aa18.2■□□□□ 0.5
COL11A1-204ENST00000427239 ASNSP08243 561 aa18.2■□□□□ 0.5
COL11A1-204ENST00000427239 ADCK5Q3MIX3 580 aa18.2■□□□□ 0.5
COL11A1-204ENST00000427239 ANKRD13AQ8IZ07 590 aa18.2■□□□□ 0.5
COL11A1-204ENST00000427239 ZSWIM5Q9P217 1185 aa18.2■□□□□ 0.5
COL11A1-204ENST00000427239 SIPA1L1O43166 1804 aa18.19■□□□□ 0.5
COL11A1-204ENST00000427239 LAMA4Q16363 1823 aa18.19■□□□□ 0.5
COL11A1-204ENST00000427239 B4E1Z4 1266 aa18.19■□□□□ 0.5
COL11A1-204ENST00000427239 MCM5P33992 734 aa18.19■□□□□ 0.5
COL11A1-204ENST00000427239 IQCA1Q86XH1 822 aa18.19■□□□□ 0.5
COL11A1-204ENST00000427239 NEDD1Q8NHV4 660 aa18.19■□□□□ 0.5
COL11A1-204ENST00000427239 JAKMIP1Q96N16 626 aaKnown RBP18.19■□□□□ 0.5
COL11A1-204ENST00000427239 FZD1Q9UP38 647 aa18.19■□□□□ 0.5
COL11A1-204ENST00000427239 MPHOSPH10O00566 681 aaKnown RBP18.18■□□□□ 0.5
COL11A1-204ENST00000427239 RRP1BQ14684 758 aaKnown RBP18.18■□□□□ 0.5
COL11A1-204ENST00000427239 CCDC178Q5BJE1 867 aa18.18■□□□□ 0.5
COL11A1-204ENST00000427239 FAM47AQ5JRC9 791 aa18.18■□□□□ 0.5
COL11A1-204ENST00000427239 LDLRAD1Q5T700 205 aa18.18■□□□□ 0.5
COL11A1-204ENST00000427239 TMEM179Q6ZVK1 233 aa18.18■□□□□ 0.5
COL11A1-204ENST00000427239 IL27Q8NEV9 243 aa18.18■□□□□ 0.5
COL11A1-204ENST00000427239 MTA3Q9BTC8 594 aa18.18■□□□□ 0.5
COL11A1-204ENST00000427239 TCP11L1Q9NUJ3 509 aa18.18■□□□□ 0.5
COL11A1-204ENST00000427239 CSADQ9Y600 493 aa18.18■□□□□ 0.5
COL11A1-204ENST00000427239 AKR1B1P15121 316 aa18.18■□□□□ 0.5
COL11A1-204ENST00000427239 INPP5BP32019 993 aa18.18■□□□□ 0.5
COL11A1-204ENST00000427239 PPP4R3BQ5MIZ7 849 aa18.18■□□□□ 0.5
COL11A1-204ENST00000427239 NOL9Q5SY16 702 aaKnown RBP18.18■□□□□ 0.5
COL11A1-204ENST00000427239 BLOC1S2Q6QNY1 142 aa18.18■□□□□ 0.5
COL11A1-204ENST00000427239 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.18■□□□□ 0.5
COL11A1-204ENST00000427239 DHX32Q7L7V1 743 aaKnown RBP18.18■□□□□ 0.5
COL11A1-204ENST00000427239 MB21D2Q8IYB1 491 aaPredicted RBP18.18■□□□□ 0.5
COL11A1-204ENST00000427239 SCYL3Q8IZE3 742 aa18.18■□□□□ 0.5
COL11A1-204ENST00000427239 ZKSCAN4Q969J2 545 aaPredicted RBP18.18■□□□□ 0.5
COL11A1-204ENST00000427239 ZSWIM6Q9HCJ5 1215 aa18.18■□□□□ 0.5
COL11A1-204ENST00000427239 GDF11O95390 407 aa18.17■□□□□ 0.5
COL11A1-204ENST00000427239 GH2P01242 217 aa18.17■□□□□ 0.5
COL11A1-204ENST00000427239 CASTP20810 708 aaKnown RBP18.17■□□□□ 0.5
COL11A1-204ENST00000427239 KANSL2Q9H9L4 492 aa18.17■□□□□ 0.5
COL11A1-204ENST00000427239 PICK1Q9NRD5 415 aa18.17■□□□□ 0.5
COL11A1-204ENST00000427239 CYP46A1Q9Y6A2 500 aa18.17■□□□□ 0.5
COL11A1-204ENST00000427239 WDR19Q8NEZ3 1342 aa18.17■□□□□ 0.5
COL11A1-204ENST00000427239 SART3Q15020 963 aaKnown RBP18.16■□□□□ 0.5
COL11A1-204ENST00000427239 MOB2Q70IA6 237 aa18.16■□□□□ 0.5
COL11A1-204ENST00000427239 RUFY3Q7L099 469 aa18.16■□□□□ 0.5
COL11A1-204ENST00000427239 TTC14Q96N46 770 aa18.16■□□□□ 0.5
COL11A1-204ENST00000427239 UBAC1Q9BSL1 405 aa18.16■□□□□ 0.5
COL11A1-204ENST00000427239 ZBTB21Q9ULJ3 1066 aa18.16■□□□□ 0.5
COL11A1-204ENST00000427239 PLIN4Q96Q06 1357 aa18.16■□□□□ 0.5
COL11A1-204ENST00000427239 UBE2Q2LH0YL09 131 aa18.15■□□□□ 0.5
COL11A1-204ENST00000427239 JAG1P78504 1218 aa18.15■□□□□ 0.5
COL11A1-204ENST00000427239 EXOSC10Q01780 885 aaKnown RBP18.15■□□□□ 0.5
COL11A1-204ENST00000427239 VGLL4Q14135 290 aa18.15■□□□□ 0.5
COL11A1-204ENST00000427239 ZSCAN10Q96SZ4 725 aaPredicted RBP18.15■□□□□ 0.5
COL11A1-204ENST00000427239 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.15■□□□□ 0.5
COL11A1-204ENST00000427239 ERICH2A1L162 156 aa18.15■□□□□ 0.5
COL11A1-204ENST00000427239 TMEM88BA6NKF7 163 aa18.15■□□□□ 0.5
COL11A1-204ENST00000427239 RPS6KB1P23443 525 aa18.15■□□□□ 0.5
COL11A1-204ENST00000427239 RAB3GAP1Q15042 981 aa18.15■□□□□ 0.5
COL11A1-204ENST00000427239 CYB5R4Q7L1T6 521 aa18.15■□□□□ 0.5
COL11A1-204ENST00000427239 SLC10A4Q96EP9 437 aa18.15■□□□□ 0.5
COL11A1-204ENST00000427239 TMEM87BQ96K49 555 aa18.15■□□□□ 0.5
COL11A1-204ENST00000427239 KIF2CQ99661 725 aa18.15■□□□□ 0.5
COL11A1-204ENST00000427239 TBC1D2Q9BYX2 928 aa18.15■□□□□ 0.5
COL11A1-204ENST00000427239 IL17RBQ9NRM6 502 aa18.15■□□□□ 0.5
COL11A1-204ENST00000427239 MTMR4Q9NYA4 1195 aa18.15■□□□□ 0.5
COL11A1-204ENST00000427239 IGKV6D-41A0A0C4DH26 115 aa18.14■□□□□ 0.49
COL11A1-204ENST00000427239 USP17L5A8MUK1 530 aa18.14■□□□□ 0.49
COL11A1-204ENST00000427239 PRC1O43663 620 aa18.14■□□□□ 0.49
COL11A1-204ENST00000427239 PTPRAP18433 802 aa18.14■□□□□ 0.49
COL11A1-204ENST00000427239 SEPT2Q15019 361 aa18.14■□□□□ 0.49
COL11A1-204ENST00000427239 DGKHQ86XP1 1220 aa18.14■□□□□ 0.49
COL11A1-204ENST00000427239 NKX2-3Q8TAU0 364 aa18.14■□□□□ 0.49
COL11A1-204ENST00000427239 PAPPA2Q9BXP8 1791 aa18.14■□□□□ 0.49
COL11A1-204ENST00000427239 GUCY1A2P33402 732 aa18.13■□□□□ 0.49
COL11A1-204ENST00000427239 NOVP48745 357 aa18.13■□□□□ 0.49
COL11A1-204ENST00000427239 HUNKP57058 714 aa18.13■□□□□ 0.49
COL11A1-204ENST00000427239 SAPCD2Q86UD0 394 aa18.13■□□□□ 0.49
COL11A1-204ENST00000427239 TMTC2Q8N394 836 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms