RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 MIGA1Q8NAN2 632 aa8.51□□□□□ -1.05
CHCHD3P1-201ENST00000425516 SH3RF3Q8TEJ3 882 aaPredicted RBP8.51□□□□□ -1.05
CHCHD3P1-201ENST00000425516 FAM227BQ96M60 508 aa8.51□□□□□ -1.05
CHCHD3P1-201ENST00000425516 STRBPQ96SI9 672 aaKnown RBP8.51□□□□□ -1.05
CHCHD3P1-201ENST00000425516 IDI2Q9BXS1 227 aa8.51□□□□□ -1.05
CHCHD3P1-201ENST00000425516 DDX4Q9NQI0 724 aaKnown RBP8.51□□□□□ -1.05
CHCHD3P1-201ENST00000425516 AATFQ9NY61 560 aaKnown RBP eCLIP8.51□□□□□ -1.05
CHCHD3P1-201ENST00000425516 GGA3Q9NZ52 723 aa8.51□□□□□ -1.05
CHCHD3P1-201ENST00000425516 MKRN1Q9UHC7 482 aaKnown RBP8.51□□□□□ -1.05
CHCHD3P1-201ENST00000425516 CNTNAP1P78357 1384 aa8.5□□□□□ -1.05
CHCHD3P1-201ENST00000425516 A0A0D9SFI3 127 aa8.5□□□□□ -1.05
CHCHD3P1-201ENST00000425516 MAGEB6P1A0A0J9YX57 407 aa8.5□□□□□ -1.05
CHCHD3P1-201ENST00000425516 M0R2C6 588 aa8.5□□□□□ -1.05
CHCHD3P1-201ENST00000425516 FOXP2O15409 715 aa8.5□□□□□ -1.05
CHCHD3P1-201ENST00000425516 TOMM70O94826 608 aa8.5□□□□□ -1.05
CHCHD3P1-201ENST00000425516 CACNB3P54284 484 aa8.5□□□□□ -1.05
CHCHD3P1-201ENST00000425516 NMIQ13287 307 aaPredicted RBP8.5□□□□□ -1.05
CHCHD3P1-201ENST00000425516 IFFO2Q5TF58 517 aa8.5□□□□□ -1.05
CHCHD3P1-201ENST00000425516 MAP1SQ66K74 1059 aaPredicted RBP8.5□□□□□ -1.05
CHCHD3P1-201ENST00000425516 DLK2Q6UY11 383 aa8.5□□□□□ -1.05
CHCHD3P1-201ENST00000425516 NYAP1Q6ZVC0 841 aa8.5□□□□□ -1.05
CHCHD3P1-201ENST00000425516 FAM83AQ86UY5 434 aa8.5□□□□□ -1.05
CHCHD3P1-201ENST00000425516 APOBEC3FQ8IUX4 373 aaKnown RBP8.5□□□□□ -1.05
CHCHD3P1-201ENST00000425516 ZFPM1Q8IX07 1006 aa8.5□□□□□ -1.05
CHCHD3P1-201ENST00000425516 LCORLQ8N3X6 602 aa8.5□□□□□ -1.05
CHCHD3P1-201ENST00000425516 TEPSINQ96N21 525 aa8.5□□□□□ -1.05
CHCHD3P1-201ENST00000425516 IL25Q9H293 177 aa8.5□□□□□ -1.05
CHCHD3P1-201ENST00000425516 HELLSQ9NRZ9 838 aa8.5□□□□□ -1.05
CHCHD3P1-201ENST00000425516 SCAF8Q9UPN6 1271 aaKnown RBP8.5□□□□□ -1.05
CHCHD3P1-201ENST00000425516 MYH7P12883 1935 aa8.49□□□□□ -1.05
CHCHD3P1-201ENST00000425516 GSG1L2A8MUP6 293 aa8.49□□□□□ -1.05
CHCHD3P1-201ENST00000425516 TCP10L2B9ZVM9 353 aa8.49□□□□□ -1.05
CHCHD3P1-201ENST00000425516 HIP1O00291 1037 aa8.49□□□□□ -1.05
CHCHD3P1-201ENST00000425516 GPAA1O43292 621 aa8.49□□□□□ -1.05
CHCHD3P1-201ENST00000425516 PRKAB2O43741 272 aa8.49□□□□□ -1.05
CHCHD3P1-201ENST00000425516 MYO1BO43795 1136 aa8.49□□□□□ -1.05
CHCHD3P1-201ENST00000425516 ENTPD3O75355 529 aa8.49□□□□□ -1.05
CHCHD3P1-201ENST00000425516 MBD4O95243 580 aa8.49□□□□□ -1.05
CHCHD3P1-201ENST00000425516 RASA3Q14644 834 aa8.49□□□□□ -1.05
CHCHD3P1-201ENST00000425516 SH3BP5LQ7L8J4 393 aa8.49□□□□□ -1.05
CHCHD3P1-201ENST00000425516 ZNF589Q86UQ0 364 aaPredicted RBP8.49□□□□□ -1.05
CHCHD3P1-201ENST00000425516 USP48Q86UV5 1035 aa8.49□□□□□ -1.05
CHCHD3P1-201ENST00000425516 TEX11Q8IYF3 940 aa8.49□□□□□ -1.05
CHCHD3P1-201ENST00000425516 TGFBRAP1Q8WUH2 860 aa8.49□□□□□ -1.05
CHCHD3P1-201ENST00000425516 FAM151AQ8WW52 585 aa8.49□□□□□ -1.05
CHCHD3P1-201ENST00000425516 DCPSQ96C86 337 aaKnown RBP8.49□□□□□ -1.05
CHCHD3P1-201ENST00000425516 NOL10Q9BSC4 688 aaKnown RBP8.49□□□□□ -1.05
CHCHD3P1-201ENST00000425516 GLIS2Q9BZE0 524 aaPredicted RBP8.49□□□□□ -1.05
CHCHD3P1-201ENST00000425516 DEFB129Q9H1M3 183 aa8.49□□□□□ -1.05
CHCHD3P1-201ENST00000425516 ARMT1Q9H993 441 aa8.49□□□□□ -1.05
CHCHD3P1-201ENST00000425516 ECM29Q5VYK3 1845 aa8.49□□□□□ -1.05
CHCHD3P1-201ENST00000425516 POLR2AP24928 1970 aaKnown RBP8.48□□□□□ -1.05
CHCHD3P1-201ENST00000425516 ADM5C9JUS6 153 aa8.48□□□□□ -1.05
CHCHD3P1-201ENST00000425516 COPS2P61201 443 aa8.48□□□□□ -1.05
CHCHD3P1-201ENST00000425516 MAP3K10Q02779 954 aa8.48□□□□□ -1.05
CHCHD3P1-201ENST00000425516 FMR1Q06787 632 aaKnown RBP eCLIP8.48□□□□□ -1.05
CHCHD3P1-201ENST00000425516 FSTL1Q12841 308 aa8.48□□□□□ -1.05
CHCHD3P1-201ENST00000425516 MCMDC2Q4G0Z9 681 aa8.48□□□□□ -1.05
CHCHD3P1-201ENST00000425516 CCDC129Q6ZRS4 1044 aa8.48□□□□□ -1.05
CHCHD3P1-201ENST00000425516 CDC37L1Q7L3B6 337 aa8.48□□□□□ -1.05
CHCHD3P1-201ENST00000425516 KRT26Q7Z3Y9 468 aa8.48□□□□□ -1.05
CHCHD3P1-201ENST00000425516 NKX2-3Q8TAU0 364 aa8.48□□□□□ -1.05
CHCHD3P1-201ENST00000425516 AIDAQ96BJ3 306 aa8.48□□□□□ -1.05
CHCHD3P1-201ENST00000425516 CRNKL1Q9BZJ0 848 aaKnown RBP8.48□□□□□ -1.05
CHCHD3P1-201ENST00000425516 TMEM39BQ9GZU3 492 aa8.48□□□□□ -1.05
CHCHD3P1-201ENST00000425516 VEZTQ9HBM0 779 aa8.48□□□□□ -1.05
CHCHD3P1-201ENST00000425516 ATP8A2Q9NTI2 1148 aa8.48□□□□□ -1.05
CHCHD3P1-201ENST00000425516 PPP2R3BQ9Y5P8 575 aa8.48□□□□□ -1.05
CHCHD3P1-201ENST00000425516 FLT1P17948 1338 aa8.48□□□□□ -1.05
CHCHD3P1-201ENST00000425516 PASKQ96RG2 1323 aa8.48□□□□□ -1.05
CHCHD3P1-201ENST00000425516 ATRNL1Q5VV63 1379 aa8.48□□□□□ -1.05
CHCHD3P1-201ENST00000425516 DDTLA6NHG4 134 aaPredicted RBP8.47□□□□□ -1.05
CHCHD3P1-201ENST00000425516 PATL2C9JE40 543 aaKnown RBP8.47□□□□□ -1.05
CHCHD3P1-201ENST00000425516 TRAF5O00463 557 aa8.47□□□□□ -1.05
CHCHD3P1-201ENST00000425516 SGSM2O43147 1006 aa8.47□□□□□ -1.05
CHCHD3P1-201ENST00000425516 OATP04181 439 aa8.47□□□□□ -1.05
CHCHD3P1-201ENST00000425516 TNNI2P48788 182 aa8.47□□□□□ -1.05
CHCHD3P1-201ENST00000425516 KCNC4Q03721 635 aa8.47□□□□□ -1.05
CHCHD3P1-201ENST00000425516 TCP10Q12799 353 aa8.47□□□□□ -1.05
CHCHD3P1-201ENST00000425516 TNFAIP1Q13829 316 aa8.47□□□□□ -1.05
CHCHD3P1-201ENST00000425516 ALX1Q15699 326 aa8.47□□□□□ -1.05
CHCHD3P1-201ENST00000425516 NBPF12Q5TAG4 269 aaPredicted RBP8.47□□□□□ -1.05
CHCHD3P1-201ENST00000425516 VPS53Q5VIR6 699 aa8.47□□□□□ -1.05
CHCHD3P1-201ENST00000425516 PRAMEF18Q5VWM3 479 aa8.47□□□□□ -1.05
CHCHD3P1-201ENST00000425516 GIMAP6Q6P9H5 292 aa8.47□□□□□ -1.05
CHCHD3P1-201ENST00000425516 CWC27Q6UX04 472 aaKnown RBP8.47□□□□□ -1.05
CHCHD3P1-201ENST00000425516 METTL16Q86W50 562 aaKnown RBP8.47□□□□□ -1.05
CHCHD3P1-201ENST00000425516 MAPKAPK5Q8IW41 473 aa8.47□□□□□ -1.05
CHCHD3P1-201ENST00000425516 SULF1Q8IWU6 871 aa8.47□□□□□ -1.05
CHCHD3P1-201ENST00000425516 SMC1BQ8NDV3 1235 aa8.47□□□□□ -1.05
CHCHD3P1-201ENST00000425516 SDR42E1Q8WUS8 393 aa8.47□□□□□ -1.05
CHCHD3P1-201ENST00000425516 OSBPL5Q9H0X9 879 aaPredicted RBP8.47□□□□□ -1.05
CHCHD3P1-201ENST00000425516 EPB41L4AQ9HCS5 686 aaPredicted RBP8.47□□□□□ -1.05
CHCHD3P1-201ENST00000425516 DCP1AQ9NPI6 582 aaPredicted RBP8.47□□□□□ -1.05
CHCHD3P1-201ENST00000425516 DIAPH3Q9NSV4 1193 aa8.47□□□□□ -1.05
CHCHD3P1-201ENST00000425516 TMOD2Q9NZR1 351 aa8.47□□□□□ -1.05
CHCHD3P1-201ENST00000425516 RPAP1Q9BWH6 1393 aaPredicted RBP8.47□□□□□ -1.05
CHCHD3P1-201ENST00000425516 COL2A1P02458 1487 aaPredicted RBP8.46□□□□□ -1.05
CHCHD3P1-201ENST00000425516 FOCADQ5VW36 1801 aa8.46□□□□□ -1.06
CHCHD3P1-201ENST00000425516 CDC45O75419 566 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms