RNA–Protein interactions for RNA: ENST00000423902.6

CHD7-201, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD7, Length 11,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-201ENST00000423902 ODR4Q5SWX8 454 aa9.48□□□□□ -0.89
CHD7-201ENST00000423902 AKNAD1Q5T1N1 836 aa9.48□□□□□ -0.89
CHD7-201ENST00000423902 PKD2L1Q9P0L9 805 aa9.48□□□□□ -0.89
CHD7-201ENST00000423902 KIF4BQ2VIQ3 1234 aa9.48□□□□□ -0.89
CHD7-201ENST00000423902 HAUS7Q99871 368 aa9.48□□□□□ -0.89
CHD7-201ENST00000423902 TRPC6Q9Y210 931 aa9.48□□□□□ -0.89
CHD7-201ENST00000423902 ARHGEF35A5YM69 484 aa9.48□□□□□ -0.89
CHD7-201ENST00000423902 SYKP43405 635 aa9.48□□□□□ -0.89
CHD7-201ENST00000423902 ASIC1P78348 528 aa9.48□□□□□ -0.89
CHD7-201ENST00000423902 KNDC1Q76NI1 1749 aa9.47□□□□□ -0.89
CHD7-201ENST00000423902 PABPN1LA6NDY0 278 aaKnown RBP9.47□□□□□ -0.89
CHD7-201ENST00000423902 CTNNA2P26232 953 aa9.47□□□□□ -0.89
CHD7-201ENST00000423902 COPRSQ9NQ92 184 aa9.47□□□□□ -0.89
CHD7-201ENST00000423902 KMT5BQ4FZB7 885 aa9.47□□□□□ -0.89
CHD7-201ENST00000423902 RUFY3Q7L099 469 aa9.47□□□□□ -0.89
CHD7-201ENST00000423902 GOLGA1Q92805 767 aa9.47□□□□□ -0.89
CHD7-201ENST00000423902 MCM7P33993 719 aa9.47□□□□□ -0.89
CHD7-201ENST00000423902 NFIXQ14938 502 aa9.47□□□□□ -0.89
CHD7-201ENST00000423902 ABI1Q8IZP0 508 aa9.47□□□□□ -0.89
CHD7-201ENST00000423902 SLFN13Q68D06 897 aa9.47□□□□□ -0.89
CHD7-201ENST00000423902 DSCC1Q9BVC3 393 aa9.47□□□□□ -0.89
CHD7-201ENST00000423902 EP400NLQ6ZTU2 488 aa9.47□□□□□ -0.89
CHD7-201ENST00000423902 FNBP1Q96RU3 617 aa9.47□□□□□ -0.89
CHD7-201ENST00000423902 ARGLU1Q9NWB6 273 aaPredicted RBP9.47□□□□□ -0.89
CHD7-201ENST00000423902 BRAPQ7Z569 592 aa9.47□□□□□ -0.89
CHD7-201ENST00000423902 TTC16Q8NEE8 873 aa9.47□□□□□ -0.89
CHD7-201ENST00000423902 GTF3C2Q8WUA4 911 aaPredicted RBP9.47□□□□□ -0.89
CHD7-201ENST00000423902 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.47□□□□□ -0.893e-6■□□□□ 8.7
CHD7-201ENST00000423902 GAS7O60861 476 aa9.47□□□□□ -0.89
CHD7-201ENST00000423902 KRT25Q7Z3Z0 450 aa9.47□□□□□ -0.89
CHD7-201ENST00000423902 SLFN12Q8IYM2 578 aa9.47□□□□□ -0.89
CHD7-201ENST00000423902 HAUS2Q9NVX0 235 aa9.47□□□□□ -0.89
CHD7-201ENST00000423902 BICDL2A1A5D9 508 aa9.47□□□□□ -0.89
CHD7-201ENST00000423902 PLCD1P51178 756 aa9.47□□□□□ -0.89
CHD7-201ENST00000423902 LLPHQ9BRT6 129 aaKnown RBP9.47□□□□□ -0.89
CHD7-201ENST00000423902 MST1RQ04912 1400 aa9.47□□□□□ -0.89
CHD7-201ENST00000423902 TESPA1A2RU30 521 aaPredicted RBP9.47□□□□□ -0.89
CHD7-201ENST00000423902 UBE3CQ15386 1083 aa9.47□□□□□ -0.89
CHD7-201ENST00000423902 CALCRLQ16602 461 aa9.47□□□□□ -0.89
CHD7-201ENST00000423902 FMN2Q9NZ56 1722 aa9.46□□□□□ -0.89
CHD7-201ENST00000423902 USP17L12C9JPN9 530 aa9.46□□□□□ -0.89
CHD7-201ENST00000423902 USP17L21D6R901 530 aa9.46□□□□□ -0.89
CHD7-201ENST00000423902 PSMA7O14818 248 aa9.46□□□□□ -0.89
CHD7-201ENST00000423902 RPS12P25398 132 aaKnown RBP9.46□□□□□ -0.89
CHD7-201ENST00000423902 CHST3Q7LGC8 479 aa9.46□□□□□ -0.89
CHD7-201ENST00000423902 H0YCG3 227 aa9.46□□□□□ -0.89
CHD7-201ENST00000423902 PDE6AP16499 860 aa9.46□□□□□ -0.89
CHD7-201ENST00000423902 FBXO11Q86XK2 927 aa9.46□□□□□ -0.89
CHD7-201ENST00000423902 GOLGA4Q13439 2230 aaKnown RBP9.46□□□□□ -0.89
CHD7-201ENST00000423902 FAM160B2Q86V87 743 aa9.46□□□□□ -0.89
CHD7-201ENST00000423902 JPH2Q9BR39 696 aaPredicted RBP9.46□□□□□ -0.89
CHD7-201ENST00000423902 BACH2Q9BYV9 841 aa9.46□□□□□ -0.89
CHD7-201ENST00000423902 ADGRB2O60241 1585 aa9.46□□□□□ -0.89
CHD7-201ENST00000423902 MKRN3Q13064 507 aaKnown RBP9.46□□□□□ -0.89
CHD7-201ENST00000423902 MARCH10Q8NA82 808 aaPredicted RBP9.46□□□□□ -0.89
CHD7-201ENST00000423902 COL14A1Q05707 1796 aaKnown RBP9.46□□□□□ -0.9
CHD7-201ENST00000423902 CCDC169A6NNP5 214 aa9.46□□□□□ -0.9
CHD7-201ENST00000423902 LETM2Q2VYF4 491 aa9.46□□□□□ -0.9
CHD7-201ENST00000423902 GALNT17Q6IS24 598 aa9.46□□□□□ -0.9
CHD7-201ENST00000423902 ZNF354CQ86Y25 554 aa9.46□□□□□ -0.9
CHD7-201ENST00000423902 NACA2Q9H009 215 aa9.46□□□□□ -0.9
CHD7-201ENST00000423902 HOXC10Q9NYD6 342 aa9.46□□□□□ -0.9
CHD7-201ENST00000423902 WDR44Q5JSH3 913 aa9.46□□□□□ -0.9
CHD7-201ENST00000423902 P4HA1P13674 534 aa9.45□□□□□ -0.9
CHD7-201ENST00000423902 NOP2P46087 812 aaKnown RBP9.45□□□□□ -0.9
CHD7-201ENST00000423902 ZNF157P51786 506 aaPredicted RBP9.45□□□□□ -0.9
CHD7-201ENST00000423902 IFNL3Q8IZI9 196 aa9.45□□□□□ -0.9
CHD7-201ENST00000423902 ZSCAN10Q96SZ4 725 aaPredicted RBP9.45□□□□□ -0.9
CHD7-201ENST00000423902 PLVAPQ9BX97 442 aa9.45□□□□□ -0.9
CHD7-201ENST00000423902 AKAP12Q02952 1782 aa9.45□□□□□ -0.9
CHD7-201ENST00000423902 POTEB2H3BUK9 544 aa9.45□□□□□ -0.9
CHD7-201ENST00000423902 CHMP2AO43633 222 aa9.45□□□□□ -0.9
CHD7-201ENST00000423902 CAVIN2O95810 425 aa9.45□□□□□ -0.9
CHD7-201ENST00000423902 GNAT1P11488 350 aa9.45□□□□□ -0.9
CHD7-201ENST00000423902 CCDC183Q5T5S1 534 aa9.45□□□□□ -0.9
CHD7-201ENST00000423902 TRAK2O60296 914 aa9.45□□□□□ -0.9
CHD7-201ENST00000423902 CCT6AP40227 531 aaKnown RBP9.45□□□□□ -0.9
CHD7-201ENST00000423902 TRPC3Q13507 836 aa9.45□□□□□ -0.9
CHD7-201ENST00000423902 SMC1AQ14683 1233 aaKnown RBP9.45□□□□□ -0.9
CHD7-201ENST00000423902 CHRNA5P30532 468 aa9.45□□□□□ -0.9
CHD7-201ENST00000423902 CRKP46108 304 aa9.45□□□□□ -0.9
CHD7-201ENST00000423902 DEFB132Q7Z7B7 95 aa9.45□□□□□ -0.9
CHD7-201ENST00000423902 IWS1Q96ST2 819 aa9.45□□□□□ -0.9
CHD7-201ENST00000423902 SEC31BQ9NQW1 1179 aa9.45□□□□□ -0.9
CHD7-201ENST00000423902 CNOT7Q9UIV1 285 aaKnown RBP9.45□□□□□ -0.9
CHD7-201ENST00000423902 PPP1R2P41236 205 aa9.45□□□□□ -0.9
CHD7-201ENST00000423902 ADPGKQ9BRR6 497 aa9.45□□□□□ -0.9
CHD7-201ENST00000423902 CD2APQ9Y5K6 639 aa9.45□□□□□ -0.9
CHD7-201ENST00000423902 HLFQ16534 295 aa9.45□□□□□ -0.9
CHD7-201ENST00000423902 SV2BQ7L1I2 683 aa9.45□□□□□ -0.9
CHD7-201ENST00000423902 ZBTB8OSQ8IWT0 167 aa9.45□□□□□ -0.9
CHD7-201ENST00000423902 RETREG2Q8NC44 543 aa9.45□□□□□ -0.9
CHD7-201ENST00000423902 PLEKHF1Q96S99 279 aa9.45□□□□□ -0.9
CHD7-201ENST00000423902 UBXN2AP68543 259 aa9.45□□□□□ -0.9
CHD7-201ENST00000423902 WRNIP1Q96S55 665 aa9.45□□□□□ -0.9
CHD7-201ENST00000423902 LBHD1Q9BQE6 289 aaPredicted RBP9.45□□□□□ -0.9
CHD7-201ENST00000423902 PARP4Q9UKK3 1724 aaKnown RBP9.45□□□□□ -0.9
CHD7-201ENST00000423902 CCND2P30279 289 aa9.45□□□□□ -0.9
CHD7-201ENST00000423902 USP44Q9H0E7 712 aa9.45□□□□□ -0.9
CHD7-201ENST00000423902 CTDSPL2Q05D32 466 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms