RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 USP17L4A6NCW7 530 aa15.29■□□□□ 0.04
MCF2L-213ENST00000421756 BMP6P22004 513 aa15.29■□□□□ 0.04
MCF2L-213ENST00000421756 ELF2Q15723 593 aa15.29■□□□□ 0.04
MCF2L-213ENST00000421756 USP17L1Q7RTZ2 530 aa15.29■□□□□ 0.04
MCF2L-213ENST00000421756 MAPKAPK5Q8IW41 473 aa15.29■□□□□ 0.04
MCF2L-213ENST00000421756 ZNF219Q9P2Y4 722 aaPredicted RBP15.29■□□□□ 0.04
MCF2L-213ENST00000421756 TNS2Q63HR2 1409 aa15.29■□□□□ 0.04
MCF2L-213ENST00000421756 CCT6AP40227 531 aaKnown RBP15.29■□□□□ 0.04
MCF2L-213ENST00000421756 SMARCE1Q969G3 411 aa15.29■□□□□ 0.04
MCF2L-213ENST00000421756 ZSCAN10Q96SZ4 725 aaPredicted RBP15.29■□□□□ 0.04
MCF2L-213ENST00000421756 MAP3K14Q99558 947 aa15.29■□□□□ 0.04
MCF2L-213ENST00000421756 MKNK2Q9HBH9 465 aa15.29■□□□□ 0.04
MCF2L-213ENST00000421756 URI1O94763 535 aaPredicted RBP15.28■□□□□ 0.04
MCF2L-213ENST00000421756 IFNAR1P17181 557 aa15.28■□□□□ 0.04
MCF2L-213ENST00000421756 HIBADHP31937 336 aaKnown RBP15.28■□□□□ 0.04
MCF2L-213ENST00000421756 MYL5Q02045 173 aa15.28■□□□□ 0.04
MCF2L-213ENST00000421756 PARP10Q53GL7 1025 aa15.28■□□□□ 0.04
MCF2L-213ENST00000421756 ZNF384Q8TF68 577 aa15.28■□□□□ 0.04
MCF2L-213ENST00000421756 DNAJC5Q9H3Z4 198 aa15.28■□□□□ 0.04
MCF2L-213ENST00000421756 RNF41Q9H4P4 317 aaPredicted RBP15.28■□□□□ 0.04
MCF2L-213ENST00000421756 SMTNL1A8MU46 457 aa15.28■□□□□ 0.04
MCF2L-213ENST00000421756 NCAPHQ15003 741 aa15.28■□□□□ 0.04
MCF2L-213ENST00000421756 POSTNQ15063 836 aa15.28■□□□□ 0.04
MCF2L-213ENST00000421756 GRIK5Q16478 980 aa15.28■□□□□ 0.04
MCF2L-213ENST00000421756 ATL3Q6DD88 541 aa15.28■□□□□ 0.04
MCF2L-213ENST00000421756 SPATA31A1Q5TZJ5 1347 aa15.28■□□□□ 0.04
MCF2L-213ENST00000421756 DEXIO95424 95 aa15.28■□□□□ 0.04
MCF2L-213ENST00000421756 ATP2B2Q01814 1243 aa15.28■□□□□ 0.04
MCF2L-213ENST00000421756 NFIXQ14938 502 aa15.28■□□□□ 0.04
MCF2L-213ENST00000421756 CTCFLQ8NI51 663 aaPredicted RBP15.28■□□□□ 0.04
MCF2L-213ENST00000421756 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.27■□□□□ 0.04
MCF2L-213ENST00000421756 TGFBRAP1Q8WUH2 860 aa15.27■□□□□ 0.04
MCF2L-213ENST00000421756 SHISA4Q96DD7 197 aa15.27■□□□□ 0.04
MCF2L-213ENST00000421756 TRIM75PA6NK02 468 aa15.27■□□□□ 0.03
MCF2L-213ENST00000421756 SLURP2P0DP57 97 aa15.27■□□□□ 0.03
MCF2L-213ENST00000421756 CTR9Q6PD62 1173 aa15.27■□□□□ 0.03
MCF2L-213ENST00000421756 CCNL1Q9UK58 526 aaPredicted RBP15.27■□□□□ 0.03
MCF2L-213ENST00000421756 RIMBP2O15034 1052 aa15.26■□□□□ 0.03
MCF2L-213ENST00000421756 LIFRP42702 1097 aa15.26■□□□□ 0.03
MCF2L-213ENST00000421756 TFAP4Q01664 338 aa15.26■□□□□ 0.03
MCF2L-213ENST00000421756 NCBP1Q09161 790 aaKnown RBP15.26■□□□□ 0.03
MCF2L-213ENST00000421756 SGMS1Q86VZ5 419 aa15.26■□□□□ 0.03
MCF2L-213ENST00000421756 SYMPKQ92797 1274 aaKnown RBP15.26■□□□□ 0.03
MCF2L-213ENST00000421756 MAN1B1Q9UKM7 699 aa15.26■□□□□ 0.03
MCF2L-213ENST00000421756 LAMA4Q16363 1823 aa15.26■□□□□ 0.03
MCF2L-213ENST00000421756 ABCC12Q96J65 1359 aa15.26■□□□□ 0.03
MCF2L-213ENST00000421756 CCDC196A0A1B0GTZ2 297 aa15.26■□□□□ 0.03
MCF2L-213ENST00000421756 NRDCO43847 1150 aa15.26■□□□□ 0.03
MCF2L-213ENST00000421756 E4F1Q66K89 784 aaPredicted RBP15.26■□□□□ 0.03
MCF2L-213ENST00000421756 A0A087X0B3 334 aa15.26■□□□□ 0.03
MCF2L-213ENST00000421756 PP2D1A8MPX8 630 aa15.26■□□□□ 0.03
MCF2L-213ENST00000421756 PTGDRQ13258 359 aa15.26■□□□□ 0.03
MCF2L-213ENST00000421756 ERCC6LQ2NKX8 1250 aa15.26■□□□□ 0.03
MCF2L-213ENST00000421756 STAG2Q8N3U4 1231 aa15.26■□□□□ 0.03
MCF2L-213ENST00000421756 WASF1Q92558 559 aa15.26■□□□□ 0.03
MCF2L-213ENST00000421756 TAF1P21675 1872 aa15.25■□□□□ 0.03
MCF2L-213ENST00000421756 CAVIN2O95810 425 aa15.25■□□□□ 0.03
MCF2L-213ENST00000421756 XBP1P17861 261 aa15.25■□□□□ 0.03
MCF2L-213ENST00000421756 TERF1P54274 439 aa15.25■□□□□ 0.03
MCF2L-213ENST00000421756 PICALMQ13492 652 aa15.25■□□□□ 0.03
MCF2L-213ENST00000421756 RESP18Q5W5W9 173 aa15.25■□□□□ 0.03
MCF2L-213ENST00000421756 KIF18AQ8NI77 898 aa15.25■□□□□ 0.03
MCF2L-213ENST00000421756 STAG1Q8WVM7 1258 aa15.25■□□□□ 0.03
MCF2L-213ENST00000421756 IRX2Q9BZI1 471 aaPredicted RBP15.25■□□□□ 0.03
MCF2L-213ENST00000421756 LZTFL1Q9NQ48 299 aa15.25■□□□□ 0.03
MCF2L-213ENST00000421756 CUTAO60888 179 aa15.25■□□□□ 0.03
MCF2L-213ENST00000421756 RFC4P35249 363 aa15.25■□□□□ 0.03
MCF2L-213ENST00000421756 MTF1Q14872 753 aa15.25■□□□□ 0.03
MCF2L-213ENST00000421756 SAMD1Q6SPF0 538 aaPredicted RBP15.25■□□□□ 0.03
MCF2L-213ENST00000421756 HEATR3Q7Z4Q2 680 aa15.25■□□□□ 0.03
MCF2L-213ENST00000421756 SRBD1Q8N5C6 995 aaKnown RBP15.25■□□□□ 0.03
MCF2L-213ENST00000421756 GNAT2P19087 354 aa15.24■□□□□ 0.03
MCF2L-213ENST00000421756 CLEC10AQ8IUN9 316 aa15.24■□□□□ 0.03
MCF2L-213ENST00000421756 TEX33O43247 280 aa15.24■□□□□ 0.03
MCF2L-213ENST00000421756 KRT2P35908 639 aa15.24■□□□□ 0.03
MCF2L-213ENST00000421756 SARM1Q6SZW1 724 aa15.24■□□□□ 0.03
MCF2L-213ENST00000421756 PPP1R13BQ96KQ4 1090 aa15.24■□□□□ 0.03
MCF2L-213ENST00000421756 RIOK1Q9BRS2 568 aaKnown RBP15.24■□□□□ 0.03
MCF2L-213ENST00000421756 UBAP1LF5GYI3 381 aa15.24■□□□□ 0.03
MCF2L-213ENST00000421756 FBXO2Q9UK22 296 aaPredicted RBP15.24■□□□□ 0.03
MCF2L-213ENST00000421756 RILPL1Q5EBL4 403 aa15.23■□□□□ 0.03
MCF2L-213ENST00000421756 VPS16Q9H269 839 aa15.23■□□□□ 0.03
MCF2L-213ENST00000421756 DCP1AQ9NPI6 582 aaPredicted RBP15.23■□□□□ 0.03
MCF2L-213ENST00000421756 GLI3P10071 1580 aa15.23■□□□□ 0.03
MCF2L-213ENST00000421756 A0A0U1RQJ8 604 aa15.23■□□□□ 0.03
MCF2L-213ENST00000421756 TPTE2Q6XPS3 522 aa15.23■□□□□ 0.03
MCF2L-213ENST00000421756 ATRIPQ8WXE1 791 aa15.23■□□□□ 0.03
MCF2L-213ENST00000421756 CRNKL1Q9BZJ0 848 aaKnown RBP15.23■□□□□ 0.03
MCF2L-213ENST00000421756 TJP1Q07157 1748 aa15.23■□□□□ 0.03
MCF2L-213ENST00000421756 C6orf229H3BNL8 230 aa15.23■□□□□ 0.03
MCF2L-213ENST00000421756 SH3RF3Q8TEJ3 882 aaPredicted RBP15.23■□□□□ 0.03
MCF2L-213ENST00000421756 ARHGEF1Q92888 912 aaKnown RBP15.23■□□□□ 0.03
MCF2L-213ENST00000421756 NSUN4Q96CB9 384 aaKnown RBP15.23■□□□□ 0.03
MCF2L-213ENST00000421756 RTCBQ9Y3I0 505 aaKnown RBP15.23■□□□□ 0.03
MCF2L-213ENST00000421756 ADAMTS7Q9UKP4 1686 aa15.22■□□□□ 0.03
MCF2L-213ENST00000421756 PPP6R2O75170 966 aa15.22■□□□□ 0.03
MCF2L-213ENST00000421756 RBM6P78332 1123 aaKnown RBP15.22■□□□□ 0.03
MCF2L-213ENST00000421756 HSD3B7Q9H2F3 369 aa15.22■□□□□ 0.03
MCF2L-213ENST00000421756 KAT14Q9H8E8 782 aa15.22■□□□□ 0.03
MCF2L-213ENST00000421756 FAM170AA1A519 330 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms