RNA–Protein interactions for RNA: ENST00000420377.6

PTPN22-202, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN22, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-202ENST00000420377 XBP1P17861 261 aa4.8□□□□□ -1.64
PTPN22-202ENST00000420377 AMPHP49418 695 aa4.8□□□□□ -1.64
PTPN22-202ENST00000420377 CLCN6P51797 869 aa4.8□□□□□ -1.64
PTPN22-202ENST00000420377 COL19A1Q14993 1142 aa4.8□□□□□ -1.64
PTPN22-202ENST00000420377 TTC31Q49AM3 519 aaPredicted RBP4.8□□□□□ -1.64
PTPN22-202ENST00000420377 GIMAP6Q6P9H5 292 aa4.8□□□□□ -1.64
PTPN22-202ENST00000420377 SULF1Q8IWU6 871 aa4.8□□□□□ -1.64
PTPN22-202ENST00000420377 MIGA1Q8NAN2 632 aa4.8□□□□□ -1.64
PTPN22-202ENST00000420377 TAF4BQ92750 862 aa4.8□□□□□ -1.64
PTPN22-202ENST00000420377 GPR101Q96P66 508 aaPredicted RBP4.8□□□□□ -1.64
PTPN22-202ENST00000420377 CRAMP1Q96RY5 1269 aa4.8□□□□□ -1.64
PTPN22-202ENST00000420377 INO80BQ9C086 356 aaPredicted RBP4.8□□□□□ -1.64
PTPN22-202ENST00000420377 UNC45AQ9H3U1 944 aa4.8□□□□□ -1.64
PTPN22-202ENST00000420377 POLKQ9UBT6 870 aa4.8□□□□□ -1.64
PTPN22-202ENST00000420377 USP25Q9UHP3 1055 aa4.8□□□□□ -1.64
PTPN22-202ENST00000420377 CCDC85CA6NKD9 419 aa4.79□□□□□ -1.64
PTPN22-202ENST00000420377 F8VZ95 297 aa4.79□□□□□ -1.64
PTPN22-202ENST00000420377 CYP27B1O15528 508 aa4.79□□□□□ -1.64
PTPN22-202ENST00000420377 TGFB3P10600 412 aa4.79□□□□□ -1.64
PTPN22-202ENST00000420377 DNAJB2P25686 324 aa4.79□□□□□ -1.64
PTPN22-202ENST00000420377 IL6STP40189 918 aaPredicted RBP4.79□□□□□ -1.64
PTPN22-202ENST00000420377 PRPHP41219 470 aa4.79□□□□□ -1.64
PTPN22-202ENST00000420377 EIF6P56537 245 aaKnown RBP4.79□□□□□ -1.64
PTPN22-202ENST00000420377 ST5P78524 1137 aa4.79□□□□□ -1.64
PTPN22-202ENST00000420377 ITPK1Q13572 414 aa4.79□□□□□ -1.64
PTPN22-202ENST00000420377 DGKZQ13574 1117 aa4.79□□□□□ -1.64
PTPN22-202ENST00000420377 RBBP5Q15291 538 aaKnown RBP4.79□□□□□ -1.64
PTPN22-202ENST00000420377 TTC19Q6DKK2 380 aaPredicted RBP4.79□□□□□ -1.64
PTPN22-202ENST00000420377 C2CD5Q86YS7 1000 aa4.79□□□□□ -1.64
PTPN22-202ENST00000420377 ENOX1Q8TC92 643 aaKnown RBP4.79□□□□□ -1.64
PTPN22-202ENST00000420377 GBP4Q96PP9 640 aa4.79□□□□□ -1.64
PTPN22-202ENST00000420377 KCNH6Q9H252 994 aa4.79□□□□□ -1.64
PTPN22-202ENST00000420377 IFT122Q9HBG6 1241 aa4.79□□□□□ -1.64
PTPN22-202ENST00000420377 ZKSCAN5Q9Y2L8 839 aa4.79□□□□□ -1.64
PTPN22-202ENST00000420377 AKAP11Q9UKA4 1901 aa4.79□□□□□ -1.64
PTPN22-202ENST00000420377 FAM205AQ6ZU69 1335 aa4.79□□□□□ -1.64
PTPN22-202ENST00000420377 SIPA1L3O60292 1781 aaPredicted RBP4.79□□□□□ -1.64
PTPN22-202ENST00000420377 HOXA2O43364 376 aa4.79□□□□□ -1.64
PTPN22-202ENST00000420377 FOSL1P15407 271 aa4.79□□□□□ -1.64
PTPN22-202ENST00000420377 TCF3P15923 654 aa4.79□□□□□ -1.64
PTPN22-202ENST00000420377 ZNF132P52740 706 aa4.79□□□□□ -1.64
PTPN22-202ENST00000420377 GRIK3Q13003 919 aa4.79□□□□□ -1.64
PTPN22-202ENST00000420377 PTK7Q13308 1070 aa4.79□□□□□ -1.64
PTPN22-202ENST00000420377 PRPF4BQ13523 1007 aaKnown RBP4.79□□□□□ -1.64
PTPN22-202ENST00000420377 TNIP1Q15025 636 aa4.79□□□□□ -1.64
PTPN22-202ENST00000420377 TAF7Q15545 349 aaPredicted RBP4.79□□□□□ -1.64
PTPN22-202ENST00000420377 ACBD5Q5T8D3 534 aaPredicted RBP4.79□□□□□ -1.64
PTPN22-202ENST00000420377 CDC37L1Q7L3B6 337 aa4.79□□□□□ -1.64
PTPN22-202ENST00000420377 NKX2-3Q8TAU0 364 aa4.79□□□□□ -1.64
PTPN22-202ENST00000420377 NEK9Q8TD19 979 aa4.79□□□□□ -1.64
PTPN22-202ENST00000420377 DDX54Q8TDD1 881 aaKnown RBP4.79□□□□□ -1.64
PTPN22-202ENST00000420377 MIEF2Q96C03 454 aa4.79□□□□□ -1.64
PTPN22-202ENST00000420377 KCNK17Q96T54 332 aa4.79□□□□□ -1.64
PTPN22-202ENST00000420377 HOXC10Q9NYD6 342 aa4.79□□□□□ -1.64
PTPN22-202ENST00000420377 CCDC39Q9UFE4 941 aa4.79□□□□□ -1.64
PTPN22-202ENST00000420377 COL11A2P13942 1736 aaPredicted RBP4.78□□□□□ -1.64
PTPN22-202ENST00000420377 ANKRD36CQ5JPF3 1778 aa4.78□□□□□ -1.64
PTPN22-202ENST00000420377 ZSCAN9O15535 394 aaPredicted RBP4.78□□□□□ -1.64
PTPN22-202ENST00000420377 SLC10A3P09131 477 aa4.78□□□□□ -1.64
PTPN22-202ENST00000420377 CCDC159P0C7I6 412 aa4.78□□□□□ -1.64
PTPN22-202ENST00000420377 FDX1P10109 184 aa4.78□□□□□ -1.64
PTPN22-202ENST00000420377 ZNF24P17028 368 aa4.78□□□□□ -1.64
PTPN22-202ENST00000420377 U2AF2P26368 475 aaKnown RBP eCLIP4.78□□□□□ -1.64
PTPN22-202ENST00000420377 CHMLP26374 656 aa4.78□□□□□ -1.64
PTPN22-202ENST00000420377 SFSWAPQ12872 951 aaKnown RBP4.78□□□□□ -1.64
PTPN22-202ENST00000420377 SART3Q15020 963 aaKnown RBP4.78□□□□□ -1.64
PTPN22-202ENST00000420377 ERFEQ4G0M1 354 aa4.78□□□□□ -1.64
PTPN22-202ENST00000420377 HHATQ5VTY9 493 aa4.78□□□□□ -1.64
PTPN22-202ENST00000420377 NAIF1Q69YI7 327 aaPredicted RBP4.78□□□□□ -1.64
PTPN22-202ENST00000420377 UBE2Q1Q7Z7E8 422 aa4.78□□□□□ -1.64
PTPN22-202ENST00000420377 KRT222Q8N1A0 295 aa4.78□□□□□ -1.64
PTPN22-202ENST00000420377 CCDC191Q8NCU4 936 aa4.78□□□□□ -1.64
PTPN22-202ENST00000420377 GIMAP1Q8WWP7 306 aa4.78□□□□□ -1.64
PTPN22-202ENST00000420377 SREK1Q8WXA9 508 aaKnown RBP4.78□□□□□ -1.64
PTPN22-202ENST00000420377 THOC1Q96FV9 657 aaKnown RBP4.78□□□□□ -1.64
PTPN22-202ENST00000420377 BICD1Q96G01 975 aa4.78□□□□□ -1.64
PTPN22-202ENST00000420377 SPATS2LQ9NUQ6 558 aaKnown RBP4.78□□□□□ -1.64
PTPN22-202ENST00000420377 MAP3K20Q9NYL2 800 aaKnown RBP4.78□□□□□ -1.64
PTPN22-202ENST00000420377 BARX2Q9UMQ3 279 aaPredicted RBP4.78□□□□□ -1.64
PTPN22-202ENST00000420377 SGSM2O43147 1006 aa4.78□□□□□ -1.64
PTPN22-202ENST00000420377 SMC2O95347 1197 aa4.78□□□□□ -1.64
PTPN22-202ENST00000420377 SERPINB2P05120 415 aa4.78□□□□□ -1.64
PTPN22-202ENST00000420377 TPM1P09493 284 aa4.78□□□□□ -1.64
PTPN22-202ENST00000420377 POTEJP0CG39 1038 aa4.78□□□□□ -1.64
PTPN22-202ENST00000420377 HARSP12081 509 aaKnown RBP4.78□□□□□ -1.64
PTPN22-202ENST00000420377 HOXD10P28358 340 aa4.78□□□□□ -1.64
PTPN22-202ENST00000420377 ATICP31939 592 aa4.78□□□□□ -1.64
PTPN22-202ENST00000420377 RDXP35241 583 aaKnown RBP4.78□□□□□ -1.64
PTPN22-202ENST00000420377 DEUP1Q05D60 604 aa4.78□□□□□ -1.64
PTPN22-202ENST00000420377 FMR1Q06787 632 aaKnown RBP eCLIP4.78□□□□□ -1.64
PTPN22-202ENST00000420377 DDR1Q08345 913 aa4.78□□□□□ -1.64
PTPN22-202ENST00000420377 DCTN1Q14203 1278 aa4.78□□□□□ -1.64
PTPN22-202ENST00000420377 PKN1Q16512 942 aa4.78□□□□□ -1.64
PTPN22-202ENST00000420377 SYNE3Q6ZMZ3 975 aa4.78□□□□□ -1.64
PTPN22-202ENST00000420377 PCGF5Q86SE9 256 aa4.78□□□□□ -1.64
PTPN22-202ENST00000420377 TRIM42Q8IWZ5 723 aa4.78□□□□□ -1.64
PTPN22-202ENST00000420377 LMNTD2Q8IXW0 634 aa4.78□□□□□ -1.64
PTPN22-202ENST00000420377 VTI1AQ96AJ9 217 aa4.78□□□□□ -1.64
PTPN22-202ENST00000420377 CCDC34Q96HJ3 373 aa4.78□□□□□ -1.64
PTPN22-202ENST00000420377 UCN2Q96RP3 112 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms