RNA–Protein interactions for RNA: ENST00000416942.2

GTF3AP1-201, Transcript of general transcription factor IIIA pseudogene 1, humanhuman

BASIC

Gene GTF3AP1, Length 1,004 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3AP1-201ENST00000416942 ACSBG1Q96GR2 724 aa9.43□□□□□ -0.9
GTF3AP1-201ENST00000416942 KCNF1Q9H3M0 494 aa9.43□□□□□ -0.9
GTF3AP1-201ENST00000416942 STOML1Q9UBI4 398 aa9.43□□□□□ -0.9
GTF3AP1-201ENST00000416942 PCDHGC5Q9Y5F6 944 aa9.43□□□□□ -0.9
GTF3AP1-201ENST00000416942 FAM135BQ49AJ0 1406 aa9.42□□□□□ -0.9
GTF3AP1-201ENST00000416942 MAP4P27816 1152 aaKnown RBP9.42□□□□□ -0.9
GTF3AP1-201ENST00000416942 LIG3P49916 1009 aa9.42□□□□□ -0.9
GTF3AP1-201ENST00000416942 ID3Q02535 119 aa9.42□□□□□ -0.9
GTF3AP1-201ENST00000416942 MAP3K11Q16584 847 aa9.42□□□□□ -0.9
GTF3AP1-201ENST00000416942 MEX3CQ5U5Q3 659 aaKnown RBP9.42□□□□□ -0.9
GTF3AP1-201ENST00000416942 CDPF1Q6NVV7 123 aa9.42□□□□□ -0.9
GTF3AP1-201ENST00000416942 BEND4Q6ZU67 534 aa9.42□□□□□ -0.9
GTF3AP1-201ENST00000416942 CLEC10AQ8IUN9 316 aa9.42□□□□□ -0.9
GTF3AP1-201ENST00000416942 GSX1Q9H4S2 264 aaPredicted RBP9.42□□□□□ -0.9
GTF3AP1-201ENST00000416942 CRIM1Q9NZV1 1036 aa9.42□□□□□ -0.9
GTF3AP1-201ENST00000416942 CLIP1P30622 1438 aa9.41□□□□□ -0.9
GTF3AP1-201ENST00000416942 ITGB7P26010 798 aa9.41□□□□□ -0.9
GTF3AP1-201ENST00000416942 RXRBP28702 533 aa9.41□□□□□ -0.9
GTF3AP1-201ENST00000416942 ASPAP45381 313 aa9.41□□□□□ -0.9
GTF3AP1-201ENST00000416942 RPS26P62854 115 aaKnown RBP9.41□□□□□ -0.9
GTF3AP1-201ENST00000416942 SCARA3Q6AZY7 606 aa9.41□□□□□ -0.9
GTF3AP1-201ENST00000416942 FBLIM1Q8WUP2 373 aa9.41□□□□□ -0.9
GTF3AP1-201ENST00000416942 FAM83CQ9BQN1 747 aa9.41□□□□□ -0.9
GTF3AP1-201ENST00000416942 C7orf69Q9H7B7 122 aa9.41□□□□□ -0.9
GTF3AP1-201ENST00000416942 FAM105AQ9NUU6 356 aa9.41□□□□□ -0.9
GTF3AP1-201ENST00000416942 SAMD9LQ8IVG5 1584 aa9.41□□□□□ -0.9
GTF3AP1-201ENST00000416942 MED14O60244 1454 aa9.4□□□□□ -0.9
GTF3AP1-201ENST00000416942 A2MP01023 1474 aa9.4□□□□□ -0.9
GTF3AP1-201ENST00000416942 HMX2A2RU54 273 aa9.4□□□□□ -0.9
GTF3AP1-201ENST00000416942 RLBP1P12271 317 aa9.4□□□□□ -0.9
GTF3AP1-201ENST00000416942 PRSS36Q5K4E3 855 aa9.4□□□□□ -0.9
GTF3AP1-201ENST00000416942 ZNF772Q68DY9 489 aaPredicted RBP9.4□□□□□ -0.9
GTF3AP1-201ENST00000416942 TRIM42Q8IWZ5 723 aa9.4□□□□□ -0.9
GTF3AP1-201ENST00000416942 YIPF2Q9BWQ6 316 aa9.4□□□□□ -0.9
GTF3AP1-201ENST00000416942 CDC42BPBQ9Y5S2 1711 aa9.39□□□□□ -0.91
GTF3AP1-201ENST00000416942 ITSN2Q9NZM3 1697 aa9.39□□□□□ -0.91
GTF3AP1-201ENST00000416942 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.39□□□□□ -0.91
GTF3AP1-201ENST00000416942 FSTP19883 344 aa9.39□□□□□ -0.91
GTF3AP1-201ENST00000416942 RAB6AP20340 208 aa9.39□□□□□ -0.91
GTF3AP1-201ENST00000416942 ZC3H12AQ5D1E8 599 aaKnown RBP9.39□□□□□ -0.91
GTF3AP1-201ENST00000416942 AGMOQ6ZNB7 445 aa9.39□□□□□ -0.91
GTF3AP1-201ENST00000416942 EZH1Q92800 747 aaPredicted RBP9.39□□□□□ -0.91
GTF3AP1-201ENST00000416942 GAL3ST3Q96A11 431 aa9.39□□□□□ -0.91
GTF3AP1-201ENST00000416942 FANCD2OSQ96PS1 177 aa9.39□□□□□ -0.91
GTF3AP1-201ENST00000416942 ATXN3LQ9H3M9 355 aa9.39□□□□□ -0.91
GTF3AP1-201ENST00000416942 FAM135AQ9P2D6 1515 aa9.39□□□□□ -0.91
GTF3AP1-201ENST00000416942 UGGT1Q9NYU2 1555 aa9.38□□□□□ -0.91
GTF3AP1-201ENST00000416942 FAM95CA0A1B0GW59 222 aa9.38□□□□□ -0.91
GTF3AP1-201ENST00000416942 LMNB1P20700 586 aa9.38□□□□□ -0.91
GTF3AP1-201ENST00000416942 PTPN11Q06124 597 aaPredicted RBP9.38□□□□□ -0.91
GTF3AP1-201ENST00000416942 ACSS3Q9H6R3 686 aa9.38□□□□□ -0.91
GTF3AP1-201ENST00000416942 DISC1Q9NRI5 854 aa9.38□□□□□ -0.91
GTF3AP1-201ENST00000416942 PCDHA4Q9UN74 947 aa9.38□□□□□ -0.91
GTF3AP1-201ENST00000416942 PCDHB5Q9Y5E4 795 aa9.38□□□□□ -0.91
GTF3AP1-201ENST00000416942 IQGAP1P46940 1657 aa9.38□□□□□ -0.91
GTF3AP1-201ENST00000416942 PIDD1Q9HB75 910 aa9.37□□□□□ -0.91
GTF3AP1-201ENST00000416942 PODXL2Q9NZ53 605 aa9.37□□□□□ -0.91
GTF3AP1-201ENST00000416942 TLR6Q9Y2C9 796 aa9.37□□□□□ -0.91
GTF3AP1-201ENST00000416942 MIA2Q96PC5 1412 aa9.37□□□□□ -0.91
GTF3AP1-201ENST00000416942 SYNMO15061 1565 aa9.37□□□□□ -0.91
GTF3AP1-201ENST00000416942 JCADQ9P266 1359 aa9.37□□□□□ -0.91
GTF3AP1-201ENST00000416942 WASHC2CQ9Y4E1 1318 aa9.36□□□□□ -0.91
GTF3AP1-201ENST00000416942 GSC2O15499 205 aa9.36□□□□□ -0.91
GTF3AP1-201ENST00000416942 NFICP08651 508 aa9.36□□□□□ -0.91
GTF3AP1-201ENST00000416942 TFE3P19532 575 aaPredicted RBP9.36□□□□□ -0.91
GTF3AP1-201ENST00000416942 ERVK-24P63145 666 aa9.36□□□□□ -0.91
GTF3AP1-201ENST00000416942 NFKBIBQ15653 356 aa9.36□□□□□ -0.91
GTF3AP1-201ENST00000416942 LDLRAD1Q5T700 205 aa9.36□□□□□ -0.91
GTF3AP1-201ENST00000416942 RNF43Q68DV7 783 aa9.36□□□□□ -0.91
GTF3AP1-201ENST00000416942 PAOXQ6QHF9 649 aa9.36□□□□□ -0.91
GTF3AP1-201ENST00000416942 PHC3Q8NDX5 983 aa9.36□□□□□ -0.91
GTF3AP1-201ENST00000416942 SEMA6CQ9H3T2 930 aa9.36□□□□□ -0.91
GTF3AP1-201ENST00000416942 TMEM94Q12767 1356 aa9.36□□□□□ -0.91
GTF3AP1-201ENST00000416942 ATP7AQ04656 1500 aa9.36□□□□□ -0.91
GTF3AP1-201ENST00000416942 SYCP2Q9BX26 1530 aa9.36□□□□□ -0.91
GTF3AP1-201ENST00000416942 DEPDC5O75140 1603 aa9.35□□□□□ -0.91
GTF3AP1-201ENST00000416942 DCDC2CA8MYV0 355 aa9.35□□□□□ -0.91
GTF3AP1-201ENST00000416942 F6X3S4 739 aa9.35□□□□□ -0.91
GTF3AP1-201ENST00000416942 KIF3BO15066 747 aa9.35□□□□□ -0.91
GTF3AP1-201ENST00000416942 PLXNC1O60486 1568 aa9.35□□□□□ -0.91
GTF3AP1-201ENST00000416942 IGLV1-40P01703 118 aa9.35□□□□□ -0.91
GTF3AP1-201ENST00000416942 NFIAQ12857 509 aa9.35□□□□□ -0.91
GTF3AP1-201ENST00000416942 SEPT6Q14141 434 aa9.35□□□□□ -0.91
GTF3AP1-201ENST00000416942 TTLL4Q14679 1199 aa9.35□□□□□ -0.91
GTF3AP1-201ENST00000416942 SLC51AQ86UW1 340 aa9.35□□□□□ -0.91
GTF3AP1-201ENST00000416942 TMEM87AQ8NBN3 555 aa9.35□□□□□ -0.91
GTF3AP1-201ENST00000416942 RSRP1Q9BUV0 290 aa9.35□□□□□ -0.91
GTF3AP1-201ENST00000416942 BACH2Q9BYV9 841 aa9.35□□□□□ -0.91
GTF3AP1-201ENST00000416942 CSADQ9Y600 493 aa9.35□□□□□ -0.91
GTF3AP1-201ENST00000416942 LRP6O75581 1613 aa9.34□□□□□ -0.91
GTF3AP1-201ENST00000416942 PREX2Q70Z35 1606 aa9.34□□□□□ -0.91
GTF3AP1-201ENST00000416942 HCLS1P14317 486 aaPredicted RBP9.34□□□□□ -0.91
GTF3AP1-201ENST00000416942 LTKP29376 864 aa9.34□□□□□ -0.91
GTF3AP1-201ENST00000416942 MAP7Q14244 749 aa9.34□□□□□ -0.91
GTF3AP1-201ENST00000416942 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.34□□□□□ -0.91
GTF3AP1-201ENST00000416942 RELL1Q8IUW5 271 aa9.34□□□□□ -0.91
GTF3AP1-201ENST00000416942 DBNDD2Q9BQY9 259 aa9.34□□□□□ -0.91
GTF3AP1-201ENST00000416942 MIR1-1HGQ9H1L0 117 aa9.34□□□□□ -0.91
GTF3AP1-201ENST00000416942 DAGLAQ9Y4D2 1042 aa9.34□□□□□ -0.91
GTF3AP1-201ENST00000416942 ROBO1Q9Y6N7 1651 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms