RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 GOLGA6DP0CG33 693 aa16.66■□□□□ 0.26
NCKIPSD-204ENST00000416649 GRAMD1CQ8IYS0 662 aa16.66■□□□□ 0.26
NCKIPSD-204ENST00000416649 GIMAP7Q8NHV1 300 aa16.66■□□□□ 0.26
NCKIPSD-204ENST00000416649 ZNF622Q969S3 477 aaKnown RBP eCLIP16.66■□□□□ 0.265e-7■■■□□ 18.5
NCKIPSD-204ENST00000416649 ZNF274Q96GC6 653 aaPredicted RBP16.66■□□□□ 0.26
NCKIPSD-204ENST00000416649 GOLGA6AQ9NYA3 693 aa16.66■□□□□ 0.26
NCKIPSD-204ENST00000416649 CDHR2Q9BYE9 1310 aa16.66■□□□□ 0.26
NCKIPSD-204ENST00000416649 GOLIM4O00461 696 aa16.66■□□□□ 0.26
NCKIPSD-204ENST00000416649 PRPF6O94906 941 aaKnown RBP16.66■□□□□ 0.26
NCKIPSD-204ENST00000416649 KIF23Q02241 960 aaPredicted RBP16.66■□□□□ 0.26
NCKIPSD-204ENST00000416649 TFCP2Q12800 502 aa16.66■□□□□ 0.26
NCKIPSD-204ENST00000416649 CTCFLQ8NI51 663 aaPredicted RBP16.66■□□□□ 0.26
NCKIPSD-204ENST00000416649 KCNH3Q9ULD8 1083 aa16.66■□□□□ 0.26
NCKIPSD-204ENST00000416649 HPCAL4Q9UM19 191 aa16.66■□□□□ 0.26
NCKIPSD-204ENST00000416649 MYH15Q9Y2K3 1946 aa16.66■□□□□ 0.26
NCKIPSD-204ENST00000416649 ABCC6O95255 1503 aa16.66■□□□□ 0.26
NCKIPSD-204ENST00000416649 JCADQ9P266 1359 aa16.66■□□□□ 0.26
NCKIPSD-204ENST00000416649 MYO1FO00160 1098 aa16.66■□□□□ 0.26
NCKIPSD-204ENST00000416649 IRAK1P51617 712 aa16.66■□□□□ 0.26
NCKIPSD-204ENST00000416649 GCKRQ14397 625 aa16.66■□□□□ 0.26
NCKIPSD-204ENST00000416649 PIGBQ92521 554 aa16.66■□□□□ 0.26
NCKIPSD-204ENST00000416649 MYO6Q9UM54 1294 aa16.66■□□□□ 0.26
NCKIPSD-204ENST00000416649 WHAMMP3Q1A5X7 153 aa16.65■□□□□ 0.26
NCKIPSD-204ENST00000416649 DNAJC10Q8IXB1 793 aa16.65■□□□□ 0.26
NCKIPSD-204ENST00000416649 MSL3Q8N5Y2 521 aaKnown RBP16.65■□□□□ 0.26
NCKIPSD-204ENST00000416649 CACNA1FO60840 1977 aa16.65■□□□□ 0.26
NCKIPSD-204ENST00000416649 CCDC196A0A1B0GTZ2 297 aa16.65■□□□□ 0.26
NCKIPSD-204ENST00000416649 CASP14P31944 242 aa16.65■□□□□ 0.26
NCKIPSD-204ENST00000416649 JMYQ8N9B5 988 aa16.65■□□□□ 0.26
NCKIPSD-204ENST00000416649 METTL22Q9BUU2 404 aaPredicted RBP16.65■□□□□ 0.26
NCKIPSD-204ENST00000416649 GUCA1BQ9UMX6 200 aa16.65■□□□□ 0.26
NCKIPSD-204ENST00000416649 ATP5JP18859 108 aa16.64■□□□□ 0.25
NCKIPSD-204ENST00000416649 RXRAP19793 462 aa16.64■□□□□ 0.25
NCKIPSD-204ENST00000416649 GNGT1P63211 74 aa16.64■□□□□ 0.25
NCKIPSD-204ENST00000416649 CENPHQ9H3R5 247 aa16.64■□□□□ 0.25
NCKIPSD-204ENST00000416649 HDAC6Q9UBN7 1215 aa16.64■□□□□ 0.25
NCKIPSD-204ENST00000416649 MAN1B1Q9UKM7 699 aa16.64■□□□□ 0.25
NCKIPSD-204ENST00000416649 MAP9Q49MG5 647 aa16.64■□□□□ 0.25
NCKIPSD-204ENST00000416649 SLF1Q9BQI6 1058 aa16.64■□□□□ 0.25
NCKIPSD-204ENST00000416649 POLD4Q9HCU8 107 aa16.64■□□□□ 0.25
NCKIPSD-204ENST00000416649 SRGAP2O75044 1071 aa16.63■□□□□ 0.25
NCKIPSD-204ENST00000416649 SCP2P22307 547 aa16.63■□□□□ 0.25
NCKIPSD-204ENST00000416649 TIMM10P62072 90 aa16.63■□□□□ 0.25
NCKIPSD-204ENST00000416649 ATP2B2Q01814 1243 aa16.63■□□□□ 0.25
NCKIPSD-204ENST00000416649 CPLX2Q6PUV4 134 aaKnown RBP16.63■□□□□ 0.25
NCKIPSD-204ENST00000416649 RDXP35241 583 aaKnown RBP16.63■□□□□ 0.25
NCKIPSD-204ENST00000416649 TNNI3KQ59H18 835 aa16.63■□□□□ 0.25
NCKIPSD-204ENST00000416649 VPS37DQ86XT2 251 aa16.63■□□□□ 0.25
NCKIPSD-204ENST00000416649 PANX2Q96RD6 677 aa16.63■□□□□ 0.25
NCKIPSD-204ENST00000416649 CAPS2Q9BXY5 557 aa16.63■□□□□ 0.25
NCKIPSD-204ENST00000416649 FPGT-TNNI3KV9GXZ4 949 aa16.63■□□□□ 0.25
NCKIPSD-204ENST00000416649 COBLO75128 1261 aa16.63■□□□□ 0.25
NCKIPSD-204ENST00000416649 ECM2O94769 699 aaPredicted RBP16.63■□□□□ 0.25
NCKIPSD-204ENST00000416649 TUBB4BP68371 445 aa16.63■□□□□ 0.25
NCKIPSD-204ENST00000416649 FKBP15Q5T1M5 1219 aa16.63■□□□□ 0.25
NCKIPSD-204ENST00000416649 SLC9C2Q5TAH2 1124 aa16.63■□□□□ 0.25
NCKIPSD-204ENST00000416649 LRP10Q7Z4F1 713 aa16.63■□□□□ 0.25
NCKIPSD-204ENST00000416649 CD248Q9HCU0 757 aa16.63■□□□□ 0.25
NCKIPSD-204ENST00000416649 TRIM10Q9UDY6 481 aa16.63■□□□□ 0.25
NCKIPSD-204ENST00000416649 KIAA0754O94854 1291 aa16.62■□□□□ 0.25
NCKIPSD-204ENST00000416649 HSPD1P10809 573 aaKnown RBP16.62■□□□□ 0.25
NCKIPSD-204ENST00000416649 COG1Q8WTW3 980 aa16.62■□□□□ 0.25
NCKIPSD-204ENST00000416649 KCNG1Q9UIX4 513 aa16.62■□□□□ 0.25
NCKIPSD-204ENST00000416649 HPSEQ9Y251 543 aa16.62■□□□□ 0.25
NCKIPSD-204ENST00000416649 SCN11AQ9UI33 1791 aa16.62■□□□□ 0.25
NCKIPSD-204ENST00000416649 C5P01031 1676 aa16.62■□□□□ 0.25
NCKIPSD-204ENST00000416649 MYO1BO43795 1136 aa16.62■□□□□ 0.25
NCKIPSD-204ENST00000416649 ZNF18P17022 549 aa16.62■□□□□ 0.25
NCKIPSD-204ENST00000416649 GPTP24298 496 aa16.62■□□□□ 0.25
NCKIPSD-204ENST00000416649 NR1I3Q14994 352 aa16.62■□□□□ 0.25
NCKIPSD-204ENST00000416649 POTEDQ86YR6 584 aa16.62■□□□□ 0.25
NCKIPSD-204ENST00000416649 GOLGA6BA6NDN3 693 aa16.61■□□□□ 0.25
NCKIPSD-204ENST00000416649 POLR2DO15514 142 aaKnown RBP16.61■□□□□ 0.25
NCKIPSD-204ENST00000416649 TUBBP07437 444 aa16.61■□□□□ 0.25
NCKIPSD-204ENST00000416649 BRD2P25440 801 aaKnown RBP16.61■□□□□ 0.25
NCKIPSD-204ENST00000416649 CCT6AP40227 531 aaKnown RBP16.61■□□□□ 0.25
NCKIPSD-204ENST00000416649 AARSP49588 968 aaKnown RBP eCLIP16.61■□□□□ 0.25
NCKIPSD-204ENST00000416649 TUBB2AQ13885 445 aa16.61■□□□□ 0.25
NCKIPSD-204ENST00000416649 POSTNQ15063 836 aa16.61■□□□□ 0.25
NCKIPSD-204ENST00000416649 PPP2R5AQ15172 486 aa16.61■□□□□ 0.25
NCKIPSD-204ENST00000416649 WDR93Q6P2C0 686 aa16.61■□□□□ 0.25
NCKIPSD-204ENST00000416649 CAGE1Q8TC20 777 aa16.61■□□□□ 0.25
NCKIPSD-204ENST00000416649 ALG1Q9BT22 464 aa16.61■□□□□ 0.25
NCKIPSD-204ENST00000416649 TUBB2BQ9BVA1 445 aa16.61■□□□□ 0.25
NCKIPSD-204ENST00000416649 AGXT2Q9BYV1 514 aa16.61■□□□□ 0.25
NCKIPSD-204ENST00000416649 ERVV-2B6SEH9 535 aa16.61■□□□□ 0.25
NCKIPSD-204ENST00000416649 NDUFAB1O14561 156 aa16.61■□□□□ 0.25
NCKIPSD-204ENST00000416649 RASGRP2Q7LDG7 609 aa16.61■□□□□ 0.25
NCKIPSD-204ENST00000416649 DHX37Q8IY37 1157 aaKnown RBP16.61■□□□□ 0.25
NCKIPSD-204ENST00000416649 OTUD6BQ8N6M0 293 aa16.61■□□□□ 0.25
NCKIPSD-204ENST00000416649 CABS1Q96KC9 395 aa16.61■□□□□ 0.25
NCKIPSD-204ENST00000416649 TTF2Q9UNY4 1162 aaKnown RBP16.61■□□□□ 0.25
NCKIPSD-204ENST00000416649 PRC1O43663 620 aa16.6■□□□□ 0.25
NCKIPSD-204ENST00000416649 KIF1CO43896 1103 aaKnown RBP16.6■□□□□ 0.25
NCKIPSD-204ENST00000416649 MYBL2P10244 700 aa16.6■□□□□ 0.25
NCKIPSD-204ENST00000416649 CDC25AP30304 524 aa16.6■□□□□ 0.25
NCKIPSD-204ENST00000416649 FXR1P51114 621 aaKnown RBP eCLIP16.6■□□□□ 0.25
NCKIPSD-204ENST00000416649 USP14P54578 494 aa16.6■□□□□ 0.25
NCKIPSD-204ENST00000416649 KCNQ4P56696 695 aa16.6■□□□□ 0.25
NCKIPSD-204ENST00000416649 TTC39AQ5SRH9 613 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms