RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 NEDD1Q8NHV4 660 aa15.71■□□□□ 0.11
CNN3-203ENST00000415017 ESR2Q92731 530 aa15.71■□□□□ 0.11
CNN3-203ENST00000415017 CDCA5Q96FF9 252 aa15.71■□□□□ 0.11
CNN3-203ENST00000415017 CCDC17Q96LX7 622 aa15.71■□□□□ 0.11
CNN3-203ENST00000415017 GPBP1L1Q9HC44 474 aaPredicted RBP15.71■□□□□ 0.11
CNN3-203ENST00000415017 FAM196BA6NMK8 535 aa15.7■□□□□ 0.1
CNN3-203ENST00000415017 B4E1Z4 1266 aa15.7■□□□□ 0.1
CNN3-203ENST00000415017 KDM4AO75164 1064 aa15.7■□□□□ 0.1
CNN3-203ENST00000415017 USP2O75604 605 aaPredicted RBP15.7■□□□□ 0.1
CNN3-203ENST00000415017 PRDM1O75626 825 aa15.7■□□□□ 0.1
CNN3-203ENST00000415017 JAG1P78504 1218 aa15.7■□□□□ 0.1
CNN3-203ENST00000415017 TRDNQ13061 729 aa15.7■□□□□ 0.1
CNN3-203ENST00000415017 PRAMEF18Q5VWM3 479 aa15.7■□□□□ 0.1
CNN3-203ENST00000415017 IGDCC4Q8TDY8 1250 aa15.7■□□□□ 0.1
CNN3-203ENST00000415017 ZNF526Q8TF50 670 aaPredicted RBP15.7■□□□□ 0.1
CNN3-203ENST00000415017 ANKS1AQ92625 1134 aa15.7■□□□□ 0.1
CNN3-203ENST00000415017 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.7■□□□□ 0.1
CNN3-203ENST00000415017 TSHZ2Q9NRE2 1034 aa15.7■□□□□ 0.1
CNN3-203ENST00000415017 IL17RBQ9NRM6 502 aa15.7■□□□□ 0.1
CNN3-203ENST00000415017 GINM1Q9NU53 330 aa15.7■□□□□ 0.1
CNN3-203ENST00000415017 CASTP20810 708 aaKnown RBP15.69■□□□□ 0.1
CNN3-203ENST00000415017 GUCY1A2P33402 732 aa15.69■□□□□ 0.1
CNN3-203ENST00000415017 MCM5P33992 734 aa15.69■□□□□ 0.1
CNN3-203ENST00000415017 EVCP57679 992 aa15.69■□□□□ 0.1
CNN3-203ENST00000415017 SEC23AQ15436 765 aa15.69■□□□□ 0.1
CNN3-203ENST00000415017 DCAF15Q66K64 600 aa15.69■□□□□ 0.1
CNN3-203ENST00000415017 RCSD1Q6JBY9 416 aa15.69■□□□□ 0.1
CNN3-203ENST00000415017 BLOC1S2Q6QNY1 142 aa15.69■□□□□ 0.1
CNN3-203ENST00000415017 CRACR2BQ8N4Y2 399 aaPredicted RBP15.69■□□□□ 0.1
CNN3-203ENST00000415017 KLRG1Q96E93 195 aa15.69■□□□□ 0.1
CNN3-203ENST00000415017 MKNK2Q9HBH9 465 aa15.69■□□□□ 0.1
CNN3-203ENST00000415017 CLEC11AQ9Y240 323 aa15.69■□□□□ 0.1
CNN3-203ENST00000415017 CYP46A1Q9Y6A2 500 aa15.69■□□□□ 0.1
CNN3-203ENST00000415017 CPA1P15085 419 aa15.68■□□□□ 0.1
CNN3-203ENST00000415017 AKR1B1P15121 316 aa15.68■□□□□ 0.1
CNN3-203ENST00000415017 CAP2P40123 477 aa15.68■□□□□ 0.1
CNN3-203ENST00000415017 CERKLQ49MI3 558 aaPredicted RBP15.68■□□□□ 0.1
CNN3-203ENST00000415017 MIGA2Q7L4E1 593 aa15.68■□□□□ 0.1
CNN3-203ENST00000415017 RALYLQ86SE5 291 aaKnown RBP15.68■□□□□ 0.1
CNN3-203ENST00000415017 ZNF444Q8N0Y2 327 aaPredicted RBP15.68■□□□□ 0.1
CNN3-203ENST00000415017 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.68■□□□□ 0.1
CNN3-203ENST00000415017 ZNF341Q9BYN7 854 aa15.68■□□□□ 0.1
CNN3-203ENST00000415017 UPF3BQ9BZI7 483 aaKnown RBP15.68■□□□□ 0.1
CNN3-203ENST00000415017 PASKQ96RG2 1323 aa15.68■□□□□ 0.1
CNN3-203ENST00000415017 PTPRFP10586 1907 aa15.67■□□□□ 0.1
CNN3-203ENST00000415017 UNCXA6NJT0 531 aa15.67■□□□□ 0.1
CNN3-203ENST00000415017 PRC1O43663 620 aa15.67■□□□□ 0.1
CNN3-203ENST00000415017 CTNND1O60716 968 aaKnown RBP15.67■□□□□ 0.1
CNN3-203ENST00000415017 TFAP4Q01664 338 aa15.67■□□□□ 0.1
CNN3-203ENST00000415017 TOB2Q14106 344 aaPredicted RBP15.67■□□□□ 0.1
CNN3-203ENST00000415017 NOL9Q5SY16 702 aaKnown RBP15.67■□□□□ 0.1
CNN3-203ENST00000415017 SIAH1Q8IUQ4 282 aa15.67■□□□□ 0.1
CNN3-203ENST00000415017 STK11IPQ8N1F8 1099 aa15.67■□□□□ 0.1
CNN3-203ENST00000415017 ZNF784Q8NCA9 323 aaPredicted RBP15.67■□□□□ 0.1
CNN3-203ENST00000415017 TMEM87BQ96K49 555 aa15.67■□□□□ 0.1
CNN3-203ENST00000415017 TRAF5O00463 557 aa15.66■□□□□ 0.1
CNN3-203ENST00000415017 SH2B2O14492 632 aaPredicted RBP15.66■□□□□ 0.1
CNN3-203ENST00000415017 RANBP6O60518 1105 aaKnown RBP15.66■□□□□ 0.1
CNN3-203ENST00000415017 YY1P25490 414 aa15.66■□□□□ 0.1
CNN3-203ENST00000415017 LIFRP42702 1097 aa15.66■□□□□ 0.1
CNN3-203ENST00000415017 NEK4P51957 841 aa15.66■□□□□ 0.1
CNN3-203ENST00000415017 SHROOM1Q2M3G4 852 aaPredicted RBP15.66■□□□□ 0.1
CNN3-203ENST00000415017 CCDC178Q5BJE1 867 aa15.66■□□□□ 0.1
CNN3-203ENST00000415017 FAM47AQ5JRC9 791 aa15.66■□□□□ 0.1
CNN3-203ENST00000415017 LDLRAD1Q5T700 205 aa15.66■□□□□ 0.1
CNN3-203ENST00000415017 TMEM179Q6ZVK1 233 aa15.66■□□□□ 0.1
CNN3-203ENST00000415017 SGMS1Q86VZ5 419 aa15.66■□□□□ 0.1
CNN3-203ENST00000415017 DGKHQ86XP1 1220 aa15.66■□□□□ 0.1
CNN3-203ENST00000415017 PIAS4Q8N2W9 510 aaPredicted RBP15.66■□□□□ 0.1
CNN3-203ENST00000415017 RBM46Q8TBY0 533 aaKnown RBP15.66■□□□□ 0.1
CNN3-203ENST00000415017 MKL1Q969V6 931 aa15.66■□□□□ 0.1
CNN3-203ENST00000415017 ZSCAN10Q96SZ4 725 aaPredicted RBP15.66■□□□□ 0.1
CNN3-203ENST00000415017 TSPY2A6NKD2 308 aa15.65■□□□□ 0.1
CNN3-203ENST00000415017 TOMM70O94826 608 aa15.65■□□□□ 0.1
CNN3-203ENST00000415017 TSPY3P0CV98 308 aa15.65■□□□□ 0.1
CNN3-203ENST00000415017 TSPY8P0CW00 308 aa15.65■□□□□ 0.1
CNN3-203ENST00000415017 FKBP1BP68106 108 aa15.65■□□□□ 0.1
CNN3-203ENST00000415017 FMR1Q06787 632 aaKnown RBP eCLIP15.65■□□□□ 0.1
CNN3-203ENST00000415017 ABCB5Q2M3G0 1257 aa15.65■□□□□ 0.1
CNN3-203ENST00000415017 RRP12Q5JTH9 1297 aaKnown RBP15.65■□□□□ 0.1
CNN3-203ENST00000415017 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.65■□□□□ 0.1
CNN3-203ENST00000415017 ENAHQ8N8S7 591 aaPredicted RBP15.65■□□□□ 0.1
CNN3-203ENST00000415017 SNX21Q969T3 373 aa15.65■□□□□ 0.1
CNN3-203ENST00000415017 TRIM34Q9BYJ4 488 aa15.65■□□□□ 0.1
CNN3-203ENST00000415017 LY9Q9HBG7 655 aa15.65■□□□□ 0.1
CNN3-203ENST00000415017 MTMR4Q9NYA4 1195 aa15.65■□□□□ 0.1
CNN3-203ENST00000415017 ZBTB21Q9ULJ3 1066 aa15.65■□□□□ 0.1
CNN3-203ENST00000415017 PPP1R12BO60237 982 aaPredicted RBP15.64■□□□□ 0.09
CNN3-203ENST00000415017 NMT2O60551 498 aa15.64■□□□□ 0.09
CNN3-203ENST00000415017 CD2BP2O95400 341 aaKnown RBP15.64■□□□□ 0.09
CNN3-203ENST00000415017 INPP5BP32019 993 aa15.64■□□□□ 0.09
CNN3-203ENST00000415017 AK2P54819 239 aa15.64■□□□□ 0.09
CNN3-203ENST00000415017 CST9Q5W186 159 aa15.64■□□□□ 0.09
CNN3-203ENST00000415017 CHST3Q7LGC8 479 aa15.64■□□□□ 0.09
CNN3-203ENST00000415017 IQCA1Q86XH1 822 aa15.64■□□□□ 0.09
CNN3-203ENST00000415017 CEP95Q96GE4 821 aa15.64■□□□□ 0.09
CNN3-203ENST00000415017 KANSL2Q9H9L4 492 aa15.64■□□□□ 0.09
CNN3-203ENST00000415017 GPHNQ9NQX3 736 aaPredicted RBP15.64■□□□□ 0.09
CNN3-203ENST00000415017 TOMM22Q9NS69 142 aa15.64■□□□□ 0.09
CNN3-203ENST00000415017 PDRG1Q9NUG6 133 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms