RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 FBXO2Q9UK22 296 aaPredicted RBP13.19□□□□□ -0.3
TRAFD1-202ENST00000412615 CACNA1SQ13698 1873 aa13.19□□□□□ -0.3
TRAFD1-202ENST00000412615 USP17L12C9JPN9 530 aa13.19□□□□□ -0.3
TRAFD1-202ENST00000412615 USP17L21D6R901 530 aa13.19□□□□□ -0.3
TRAFD1-202ENST00000412615 PRPF3O43395 683 aaKnown RBP13.19□□□□□ -0.3
TRAFD1-202ENST00000412615 MYL5Q02045 173 aa13.19□□□□□ -0.3
TRAFD1-202ENST00000412615 MECOMQ03112 1051 aa13.19□□□□□ -0.3
TRAFD1-202ENST00000412615 NGLY1Q96IV0 654 aa13.19□□□□□ -0.3
TRAFD1-202ENST00000412615 CRNKL1Q9BZJ0 848 aaKnown RBP13.19□□□□□ -0.3
TRAFD1-202ENST00000412615 PAXBP1Q9Y5B6 917 aa13.19□□□□□ -0.3
TRAFD1-202ENST00000412615 CYP2D7A0A087X1C5 515 aa13.18□□□□□ -0.3
TRAFD1-202ENST00000412615 SMIM22K7EJ46 135 aa13.18□□□□□ -0.3
TRAFD1-202ENST00000412615 CCZ1BP86790 482 aa13.18□□□□□ -0.3
TRAFD1-202ENST00000412615 CCZ1P86791 482 aaPredicted RBP13.18□□□□□ -0.3
TRAFD1-202ENST00000412615 CABP5Q9NP86 173 aa13.18□□□□□ -0.3
TRAFD1-202ENST00000412615 PCDHB6Q9Y5E3 794 aa13.18□□□□□ -0.3
TRAFD1-202ENST00000412615 SRPRBQ9Y5M8 271 aaKnown RBP13.18□□□□□ -0.3
TRAFD1-202ENST00000412615 MYO1BO43795 1136 aa13.18□□□□□ -0.3
TRAFD1-202ENST00000412615 DDAH1O94760 285 aa13.18□□□□□ -0.3
TRAFD1-202ENST00000412615 LMOD1P29536 600 aaPredicted RBP13.18□□□□□ -0.3
TRAFD1-202ENST00000412615 FANCCQ00597 558 aa13.18□□□□□ -0.3
TRAFD1-202ENST00000412615 CCDC150Q8NCX0 1101 aa13.18□□□□□ -0.3
TRAFD1-202ENST00000412615 OXER1Q8TDS5 423 aa13.18□□□□□ -0.3
TRAFD1-202ENST00000412615 UBE2Q2Q8WVN8 375 aa13.18□□□□□ -0.3
TRAFD1-202ENST00000412615 ATP8A2Q9NTI2 1148 aa13.18□□□□□ -0.3
TRAFD1-202ENST00000412615 SRP68Q9UHB9 627 aaKnown RBP13.18□□□□□ -0.3
TRAFD1-202ENST00000412615 PCDHA5Q9Y5H7 936 aa13.18□□□□□ -0.3
TRAFD1-202ENST00000412615 A0A1B0GUL6 1792 aa13.18□□□□□ -0.3
TRAFD1-202ENST00000412615 GNPATO15228 680 aa13.17□□□□□ -0.3
TRAFD1-202ENST00000412615 ORC4O43929 436 aa13.17□□□□□ -0.3
TRAFD1-202ENST00000412615 PRDM1O75626 825 aa13.17□□□□□ -0.3
TRAFD1-202ENST00000412615 KLRK1P26718 216 aa13.17□□□□□ -0.3
TRAFD1-202ENST00000412615 FUT2Q10981 343 aa13.17□□□□□ -0.3
TRAFD1-202ENST00000412615 TROAPQ12815 778 aa13.17□□□□□ -0.3
TRAFD1-202ENST00000412615 SMIM5Q71RC9 77 aa13.17□□□□□ -0.3
TRAFD1-202ENST00000412615 TMC6Q7Z403 805 aa13.17□□□□□ -0.3
TRAFD1-202ENST00000412615 FOXP4Q8IVH2 680 aaPredicted RBP13.17□□□□□ -0.3
TRAFD1-202ENST00000412615 C8orf37Q96NL8 207 aa13.17□□□□□ -0.3
TRAFD1-202ENST00000412615 TFCP2L1Q9NZI6 479 aa13.17□□□□□ -0.3
TRAFD1-202ENST00000412615 RTCBQ9Y3I0 505 aaKnown RBP13.17□□□□□ -0.3
TRAFD1-202ENST00000412615 MORC2Q9Y6X9 1032 aaPredicted RBP13.17□□□□□ -0.3
TRAFD1-202ENST00000412615 DUOX1Q9NRD9 1551 aa13.17□□□□□ -0.3
TRAFD1-202ENST00000412615 CBFA2T2O43439 604 aa13.17□□□□□ -0.3
TRAFD1-202ENST00000412615 NRDCO43847 1150 aa13.17□□□□□ -0.3
TRAFD1-202ENST00000412615 KRT2P35908 639 aa13.17□□□□□ -0.3
TRAFD1-202ENST00000412615 MDM2Q00987 491 aaPredicted RBP13.17□□□□□ -0.3
TRAFD1-202ENST00000412615 PKN1Q16512 942 aa13.17□□□□□ -0.3
TRAFD1-202ENST00000412615 SPECC1Q5M775 1068 aa13.17□□□□□ -0.3
TRAFD1-202ENST00000412615 KANK3Q6NY19 840 aa13.17□□□□□ -0.3
TRAFD1-202ENST00000412615 PHF20Q9BVI0 1012 aa13.17□□□□□ -0.3
TRAFD1-202ENST00000412615 DCP1AQ9NPI6 582 aaPredicted RBP13.17□□□□□ -0.3
TRAFD1-202ENST00000412615 KCND1Q9NSA2 647 aa13.17□□□□□ -0.3
TRAFD1-202ENST00000412615 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.17□□□□□ -0.3
TRAFD1-202ENST00000412615 SCN7AQ01118 1682 aa13.17□□□□□ -0.3
TRAFD1-202ENST00000412615 ZBTB22O15209 634 aa13.16□□□□□ -0.3
TRAFD1-202ENST00000412615 POSTNQ15063 836 aa13.16□□□□□ -0.3
TRAFD1-202ENST00000412615 GLIPR1L2Q4G1C9 344 aa13.16□□□□□ -0.3
TRAFD1-202ENST00000412615 BRMS1Q9HCU9 246 aa13.16□□□□□ -0.3
TRAFD1-202ENST00000412615 AATFQ9NY61 560 aaKnown RBP eCLIP13.16□□□□□ -0.3
TRAFD1-202ENST00000412615 VPS54Q9P1Q0 977 aa13.16□□□□□ -0.3
TRAFD1-202ENST00000412615 ARPP21Q9UBL0 812 aaPredicted RBP13.16□□□□□ -0.3
TRAFD1-202ENST00000412615 V9GY48 417 aaPredicted RBP13.16□□□□□ -0.3
TRAFD1-202ENST00000412615 TAF1P21675 1872 aa13.16□□□□□ -0.3
TRAFD1-202ENST00000412615 TRIM75PA6NK02 468 aa13.16□□□□□ -0.3
TRAFD1-202ENST00000412615 POLR2DO15514 142 aaKnown RBP13.16□□□□□ -0.3
TRAFD1-202ENST00000412615 ATP2B1P20020 1258 aa13.16□□□□□ -0.3
TRAFD1-202ENST00000412615 GRIN1Q05586 938 aa13.16□□□□□ -0.3
TRAFD1-202ENST00000412615 SPTY2D1Q68D10 685 aaPredicted RBP13.16□□□□□ -0.3
TRAFD1-202ENST00000412615 CCDC34Q96HJ3 373 aa13.16□□□□□ -0.3
TRAFD1-202ENST00000412615 HSD3B7Q9H2F3 369 aa13.16□□□□□ -0.3
TRAFD1-202ENST00000412615 IGSF3O75054 1194 aa13.16□□□□□ -0.3
TRAFD1-202ENST00000412615 BMP15O95972 392 aa13.16□□□□□ -0.3
TRAFD1-202ENST00000412615 SERPINC1P01008 464 aa13.16□□□□□ -0.3
TRAFD1-202ENST00000412615 SFPQP23246 707 aaKnown RBP eCLIP13.16□□□□□ -0.3
TRAFD1-202ENST00000412615 PTPN14Q15678 1187 aa13.16□□□□□ -0.3
TRAFD1-202ENST00000412615 SBK1Q52WX2 424 aa13.16□□□□□ -0.3
TRAFD1-202ENST00000412615 CEP135Q66GS9 1140 aa13.16□□□□□ -0.3
TRAFD1-202ENST00000412615 PTF1AQ7RTS3 328 aa13.16□□□□□ -0.3
TRAFD1-202ENST00000412615 CTCFLQ8NI51 663 aaPredicted RBP13.16□□□□□ -0.3
TRAFD1-202ENST00000412615 DACH1Q9UI36 760 aa13.16□□□□□ -0.3
TRAFD1-202ENST00000412615 CCNL1Q9UK58 526 aaPredicted RBP13.16□□□□□ -0.3
TRAFD1-202ENST00000412615 CTIFO43310 598 aaKnown RBP13.15□□□□□ -0.3
TRAFD1-202ENST00000412615 PLEKHA8P1O95397 391 aa13.15□□□□□ -0.3
TRAFD1-202ENST00000412615 PRDX5P30044 214 aa13.15□□□□□ -0.3
TRAFD1-202ENST00000412615 UBASH3AP57075 661 aa13.15□□□□□ -0.3
TRAFD1-202ENST00000412615 PDE4BQ07343 736 aa13.15□□□□□ -0.3
TRAFD1-202ENST00000412615 NT5DC1Q5TFE4 455 aa13.15□□□□□ -0.3
TRAFD1-202ENST00000412615 TMTC3Q6ZXV5 915 aa13.15□□□□□ -0.3
TRAFD1-202ENST00000412615 CCAR2Q8N163 923 aaKnown RBP13.15□□□□□ -0.3
TRAFD1-202ENST00000412615 TSC1Q92574 1164 aa13.15□□□□□ -0.3
TRAFD1-202ENST00000412615 SERTAD1Q9UHV2 236 aa13.15□□□□□ -0.3
TRAFD1-202ENST00000412615 NPHP1O15259 732 aa13.15□□□□□ -0.31
TRAFD1-202ENST00000412615 ATP1A3P13637 1013 aa13.15□□□□□ -0.31
TRAFD1-202ENST00000412615 TM4SF1P30408 202 aa13.15□□□□□ -0.31
TRAFD1-202ENST00000412615 TRIML1Q8N9V2 468 aa13.15□□□□□ -0.31
TRAFD1-202ENST00000412615 MLKLQ8NB16 471 aa13.15□□□□□ -0.31
TRAFD1-202ENST00000412615 SMARCE1Q969G3 411 aa13.15□□□□□ -0.31
TRAFD1-202ENST00000412615 FOXN1O15353 648 aa13.14□□□□□ -0.31
TRAFD1-202ENST00000412615 SARSP49591 514 aaKnown RBP13.14□□□□□ -0.31
TRAFD1-202ENST00000412615 NT5C2P49902 561 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms