RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 DDRGK1Q96HY6 314 aa14.35□□□□□ -0.11
NEDD1-202ENST00000411739 AFG3L2Q9Y4W6 797 aa14.35□□□□□ -0.11
NEDD1-202ENST00000411739 PATL2C9JE40 543 aaKnown RBP14.35□□□□□ -0.11
NEDD1-202ENST00000411739 GABPAQ06546 454 aa14.35□□□□□ -0.11
NEDD1-202ENST00000411739 SPP2Q13103 211 aa14.35□□□□□ -0.11
NEDD1-202ENST00000411739 CERKLQ49MI3 558 aaPredicted RBP14.35□□□□□ -0.11
NEDD1-202ENST00000411739 COL13A1Q5TAT6 717 aaPredicted RBP14.35□□□□□ -0.11
NEDD1-202ENST00000411739 EHD4Q9H223 541 aa14.35□□□□□ -0.11
NEDD1-202ENST00000411739 MPHOSPH10O00566 681 aaKnown RBP14.34□□□□□ -0.11
NEDD1-202ENST00000411739 FOXP2O15409 715 aa14.34□□□□□ -0.11
NEDD1-202ENST00000411739 TATDN1Q6P1N9 297 aa14.34□□□□□ -0.11
NEDD1-202ENST00000411739 ZBTB21Q9ULJ3 1066 aa14.34□□□□□ -0.11
NEDD1-202ENST00000411739 DDX60LQ5H9U9 1706 aaKnown RBP14.34□□□□□ -0.11
NEDD1-202ENST00000411739 BTBD19C9JJ37 291 aa14.34□□□□□ -0.11
NEDD1-202ENST00000411739 CETPP11597 493 aa14.34□□□□□ -0.11
NEDD1-202ENST00000411739 RAB3GAP1Q15042 981 aa14.34□□□□□ -0.11
NEDD1-202ENST00000411739 MCMDC2Q4G0Z9 681 aa14.34□□□□□ -0.11
NEDD1-202ENST00000411739 REM2Q8IYK8 340 aaPredicted RBP14.34□□□□□ -0.11
NEDD1-202ENST00000411739 HELLSQ9NRZ9 838 aa14.34□□□□□ -0.11
NEDD1-202ENST00000411739 TESPA1A2RU30 521 aaPredicted RBP14.33□□□□□ -0.12
NEDD1-202ENST00000411739 USP17L5A8MUK1 530 aa14.33□□□□□ -0.12
NEDD1-202ENST00000411739 CDK8P49336 464 aa14.33□□□□□ -0.12
NEDD1-202ENST00000411739 INHBEP58166 350 aa14.33□□□□□ -0.12
NEDD1-202ENST00000411739 GADL1Q6ZQY3 521 aa14.33□□□□□ -0.12
NEDD1-202ENST00000411739 DIAPH3Q9NSV4 1193 aa14.33□□□□□ -0.12
NEDD1-202ENST00000411739 KCNH4Q9UQ05 1017 aa14.33□□□□□ -0.12
NEDD1-202ENST00000411739 DOCK1Q14185 1865 aa14.33□□□□□ -0.12
NEDD1-202ENST00000411739 GNAT2P19087 354 aa14.33□□□□□ -0.12
NEDD1-202ENST00000411739 MOGSQ13724 837 aa14.33□□□□□ -0.12
NEDD1-202ENST00000411739 ABCB5Q2M3G0 1257 aa14.33□□□□□ -0.12
NEDD1-202ENST00000411739 CLEC10AQ8IUN9 316 aa14.33□□□□□ -0.12
NEDD1-202ENST00000411739 AMOTL1Q8IY63 956 aa14.33□□□□□ -0.12
NEDD1-202ENST00000411739 IL25Q9H293 177 aa14.33□□□□□ -0.12
NEDD1-202ENST00000411739 INCENPQ9NQS7 918 aa14.33□□□□□ -0.12
NEDD1-202ENST00000411739 PRDM1O75626 825 aa14.32□□□□□ -0.12
NEDD1-202ENST00000411739 ECM2O94769 699 aaPredicted RBP14.32□□□□□ -0.12
NEDD1-202ENST00000411739 CRHR2Q13324 411 aa14.32□□□□□ -0.12
NEDD1-202ENST00000411739 CA12O43570 354 aa14.32□□□□□ -0.12
NEDD1-202ENST00000411739 ASNSP08243 561 aa14.32□□□□□ -0.12
NEDD1-202ENST00000411739 AKR1B1P15121 316 aa14.32□□□□□ -0.12
NEDD1-202ENST00000411739 HMGCS2P54868 508 aa14.32□□□□□ -0.12
NEDD1-202ENST00000411739 SEPT2Q15019 361 aa14.32□□□□□ -0.12
NEDD1-202ENST00000411739 ZYXQ15942 572 aaKnown RBP14.32□□□□□ -0.12
NEDD1-202ENST00000411739 ZNF280CQ8ND82 737 aa14.32□□□□□ -0.12
NEDD1-202ENST00000411739 NAPBQ9H115 298 aa14.32□□□□□ -0.12
NEDD1-202ENST00000411739 ARPP21Q9UBL0 812 aaPredicted RBP14.32□□□□□ -0.12
NEDD1-202ENST00000411739 CASP8AP2Q9UKL3 1982 aa14.31□□□□□ -0.12
NEDD1-202ENST00000411739 ATAD5Q96QE3 1844 aa14.31□□□□□ -0.12
NEDD1-202ENST00000411739 CXCL11O14625 94 aa14.31□□□□□ -0.12
NEDD1-202ENST00000411739 GUCY1A2P33402 732 aa14.31□□□□□ -0.12
NEDD1-202ENST00000411739 NACAP1Q9BZK3 213 aa14.31□□□□□ -0.12
NEDD1-202ENST00000411739 SAGE1Q9NXZ1 904 aa14.31□□□□□ -0.12
NEDD1-202ENST00000411739 A0A0G2JLL6 359 aaPredicted RBP14.31□□□□□ -0.12
NEDD1-202ENST00000411739 CTDSPL2Q05D32 466 aa14.31□□□□□ -0.12
NEDD1-202ENST00000411739 MTMR2Q13614 643 aa14.31□□□□□ -0.12
NEDD1-202ENST00000411739 TAF1CQ15572 869 aaPredicted RBP14.31□□□□□ -0.12
NEDD1-202ENST00000411739 SBK1Q52WX2 424 aa14.31□□□□□ -0.12
NEDD1-202ENST00000411739 GPAT2Q6NUI2 795 aa14.31□□□□□ -0.12
NEDD1-202ENST00000411739 GIMAP6Q6P9H5 292 aa14.31□□□□□ -0.12
NEDD1-202ENST00000411739 C16orf86Q6ZW13 317 aa14.31□□□□□ -0.12
NEDD1-202ENST00000411739 PRRT2Q7Z6L0 340 aaPredicted RBP14.31□□□□□ -0.12
NEDD1-202ENST00000411739 ACER1Q8TDN7 264 aa14.31□□□□□ -0.12
NEDD1-202ENST00000411739 PHIPQ8WWQ0 1821 aa14.3□□□□□ -0.12
NEDD1-202ENST00000411739 PDHXO00330 501 aa14.3□□□□□ -0.12
NEDD1-202ENST00000411739 HSPD1P10809 573 aaKnown RBP14.3□□□□□ -0.12
NEDD1-202ENST00000411739 TREML2Q5T2D2 321 aa14.3□□□□□ -0.12
NEDD1-202ENST00000411739 OTUD7BQ6GQQ9 843 aa14.3□□□□□ -0.12
NEDD1-202ENST00000411739 CABP5Q9NP86 173 aa14.3□□□□□ -0.12
NEDD1-202ENST00000411739 CCDC171Q6TFL3 1326 aa14.3□□□□□ -0.12
NEDD1-202ENST00000411739 CYP2C8P10632 490 aa14.3□□□□□ -0.12
NEDD1-202ENST00000411739 SWAP70Q9UH65 585 aa14.3□□□□□ -0.12
NEDD1-202ENST00000411739 ALDH1A1P00352 501 aa14.29□□□□□ -0.12
NEDD1-202ENST00000411739 FGAP02671 866 aa14.29□□□□□ -0.12
NEDD1-202ENST00000411739 HAND2P61296 217 aa14.29□□□□□ -0.12
NEDD1-202ENST00000411739 PPARAQ07869 468 aa14.29□□□□□ -0.12
NEDD1-202ENST00000411739 ZNF296Q8WUU4 475 aaPredicted RBP14.29□□□□□ -0.12
NEDD1-202ENST00000411739 MKNK2Q9HBH9 465 aa14.29□□□□□ -0.12
NEDD1-202ENST00000411739 AS3MTQ9HBK9 375 aa14.29□□□□□ -0.12
NEDD1-202ENST00000411739 PPP4R2Q9NY27 417 aa14.29□□□□□ -0.12
NEDD1-202ENST00000411739 TACC3Q9Y6A5 838 aa14.29□□□□□ -0.12
NEDD1-202ENST00000411739 GPR25O00155 361 aa14.29□□□□□ -0.12
NEDD1-202ENST00000411739 CHMLP26374 656 aa14.28□□□□□ -0.12
NEDD1-202ENST00000411739 BACE1P56817 501 aa14.28□□□□□ -0.12
NEDD1-202ENST00000411739 ATP2B2Q01814 1243 aa14.28□□□□□ -0.12
NEDD1-202ENST00000411739 WDR18Q9BV38 432 aa14.28□□□□□ -0.12
NEDD1-202ENST00000411739 PRDM10Q9NQV6 1147 aa14.28□□□□□ -0.12
NEDD1-202ENST00000411739 USP17L10C9JJH3 530 aa14.27□□□□□ -0.12
NEDD1-202ENST00000411739 RASA1P20936 1047 aa14.27□□□□□ -0.12
NEDD1-202ENST00000411739 FASTKD5Q7L8L6 764 aaKnown RBP14.27□□□□□ -0.12
NEDD1-202ENST00000411739 ANKRD23Q86SG2 305 aa14.27□□□□□ -0.12
NEDD1-202ENST00000411739 FEZ1Q99689 392 aa14.27□□□□□ -0.12
NEDD1-202ENST00000411739 CPA4Q9UI42 421 aa14.27□□□□□ -0.12
NEDD1-202ENST00000411739 A0A1W2PRG0 241 aa14.27□□□□□ -0.13
NEDD1-202ENST00000411739 FAM47AQ5JRC9 791 aa14.27□□□□□ -0.13
NEDD1-202ENST00000411739 ZFYVE28Q9HCC9 887 aa14.27□□□□□ -0.13
NEDD1-202ENST00000411739 EMILIN3Q9NT22 766 aa14.27□□□□□ -0.13
NEDD1-202ENST00000411739 HIP1O00291 1037 aa14.26□□□□□ -0.13
NEDD1-202ENST00000411739 SIAH1Q8IUQ4 282 aa14.26□□□□□ -0.13
NEDD1-202ENST00000411739 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.26□□□□□ -0.13
NEDD1-202ENST00000411739 CAP1Q01518 475 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms