RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 NCOA7Q8NI08 942 aa18.01■□□□□ 0.47
LSM5-207ENST00000410044 TM6SF1Q9BZW5 370 aa18.01■□□□□ 0.47
LSM5-207ENST00000410044 GBA2Q9HCG7 927 aaPredicted RBP18.01■□□□□ 0.47
LSM5-207ENST00000410044 PAPPA2Q9BXP8 1791 aa18.01■□□□□ 0.47
LSM5-207ENST00000410044 NEDD4P46934 1319 aa18■□□□□ 0.47
LSM5-207ENST00000410044 TRDNQ13061 729 aa18■□□□□ 0.47
LSM5-207ENST00000410044 ADCK5Q3MIX3 580 aa18■□□□□ 0.47
LSM5-207ENST00000410044 STK11IPQ8N1F8 1099 aa18■□□□□ 0.47
LSM5-207ENST00000410044 C2orf69Q8N8R5 385 aa18■□□□□ 0.47
LSM5-207ENST00000410044 NEDD1Q8NHV4 660 aa18■□□□□ 0.47
LSM5-207ENST00000410044 ESR2Q92731 530 aa18■□□□□ 0.47
LSM5-207ENST00000410044 TBC1D32Q96NH3 1257 aa18■□□□□ 0.47
LSM5-207ENST00000410044 NEK1Q96PY6 1258 aa18■□□□□ 0.47
LSM5-207ENST00000410044 TCP11L1Q9NUJ3 509 aa18■□□□□ 0.47
LSM5-207ENST00000410044 ANGEL1Q9UNK9 670 aaKnown RBP18■□□□□ 0.47
LSM5-207ENST00000410044 GREB1LQ9C091 1923 aaPredicted RBP18■□□□□ 0.47
LSM5-207ENST00000410044 PRDM1O75626 825 aa17.99■□□□□ 0.47
LSM5-207ENST00000410044 HMGB1P09429 215 aaKnown RBP17.99■□□□□ 0.47
LSM5-207ENST00000410044 JAG1P78504 1218 aa17.99■□□□□ 0.47
LSM5-207ENST00000410044 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.99■□□□□ 0.47
LSM5-207ENST00000410044 ANKRD13AQ8IZ07 590 aa17.99■□□□□ 0.47
LSM5-207ENST00000410044 NKX2-3Q8TAU0 364 aa17.99■□□□□ 0.47
LSM5-207ENST00000410044 MTA3Q9BTC8 594 aa17.99■□□□□ 0.47
LSM5-207ENST00000410044 ZSWIM5Q9P217 1185 aa17.99■□□□□ 0.47
LSM5-207ENST00000410044 FZD1Q9UP38 647 aa17.99■□□□□ 0.47
LSM5-207ENST00000410044 IGKV6D-41A0A0C4DH26 115 aa17.98■□□□□ 0.47
LSM5-207ENST00000410044 B4E1Z4 1266 aa17.98■□□□□ 0.47
LSM5-207ENST00000410044 ASNSP08243 561 aa17.98■□□□□ 0.47
LSM5-207ENST00000410044 AKR1B1P15121 316 aa17.98■□□□□ 0.47
LSM5-207ENST00000410044 PSMA5P28066 241 aa17.98■□□□□ 0.47
LSM5-207ENST00000410044 INPP5BP32019 993 aa17.98■□□□□ 0.47
LSM5-207ENST00000410044 NOVP48745 357 aa17.98■□□□□ 0.47
LSM5-207ENST00000410044 TFAP4Q01664 338 aa17.98■□□□□ 0.47
LSM5-207ENST00000410044 ABCB5Q2M3G0 1257 aa17.98■□□□□ 0.47
LSM5-207ENST00000410044 MB21D2Q8IYB1 491 aaPredicted RBP17.98■□□□□ 0.47
LSM5-207ENST00000410044 SCYL3Q8IZE3 742 aa17.98■□□□□ 0.47
LSM5-207ENST00000410044 WRNIP1Q96S55 665 aa17.98■□□□□ 0.47
LSM5-207ENST00000410044 KIF2CQ99661 725 aa17.98■□□□□ 0.47
LSM5-207ENST00000410044 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.98■□□□□ 0.47
LSM5-207ENST00000410044 ZSWIM6Q9HCJ5 1215 aa17.98■□□□□ 0.47
LSM5-207ENST00000410044 CABP5Q9NP86 173 aa17.98■□□□□ 0.47
LSM5-207ENST00000410044 PLIN4Q96Q06 1357 aa17.98■□□□□ 0.47
LSM5-207ENST00000410044 ATAD5Q96QE3 1844 aa17.98■□□□□ 0.47
LSM5-207ENST00000410044 RANBP6O60518 1105 aaKnown RBP17.97■□□□□ 0.47
LSM5-207ENST00000410044 KDM4AO75164 1064 aa17.97■□□□□ 0.47
LSM5-207ENST00000410044 GUCY1A2P33402 732 aa17.97■□□□□ 0.47
LSM5-207ENST00000410044 EXOSC10Q01780 885 aaKnown RBP17.97■□□□□ 0.47
LSM5-207ENST00000410044 PRKG1Q13976 671 aa17.97■□□□□ 0.47
LSM5-207ENST00000410044 TMEM179Q6ZVK1 233 aa17.97■□□□□ 0.47
LSM5-207ENST00000410044 MOB2Q70IA6 237 aa17.97■□□□□ 0.47
LSM5-207ENST00000410044 RALYLQ86SE5 291 aaKnown RBP17.97■□□□□ 0.47
LSM5-207ENST00000410044 IL27Q8NEV9 243 aa17.97■□□□□ 0.47
LSM5-207ENST00000410044 ZNF408Q9H9D4 720 aa17.97■□□□□ 0.47
LSM5-207ENST00000410044 TOMM22Q9NS69 142 aa17.97■□□□□ 0.47
LSM5-207ENST00000410044 DOCK1Q14185 1865 aa17.97■□□□□ 0.47
LSM5-207ENST00000410044 WDR19Q8NEZ3 1342 aa17.97■□□□□ 0.47
LSM5-207ENST00000410044 TSPY2A6NKD2 308 aa17.96■□□□□ 0.47
LSM5-207ENST00000410044 UBE2Q2LH0YL09 131 aa17.96■□□□□ 0.47
LSM5-207ENST00000410044 TSPY3P0CV98 308 aa17.96■□□□□ 0.47
LSM5-207ENST00000410044 TSPY8P0CW00 308 aa17.96■□□□□ 0.47
LSM5-207ENST00000410044 TTLL12Q14166 644 aaPredicted RBP17.96■□□□□ 0.47
LSM5-207ENST00000410044 CCDC178Q5BJE1 867 aa17.96■□□□□ 0.47
LSM5-207ENST00000410044 FAM47AQ5JRC9 791 aa17.96■□□□□ 0.47
LSM5-207ENST00000410044 RRP12Q5JTH9 1297 aaKnown RBP17.96■□□□□ 0.47
LSM5-207ENST00000410044 CYB5R4Q7L1T6 521 aa17.96■□□□□ 0.47
LSM5-207ENST00000410044 DHX32Q7L7V1 743 aaKnown RBP17.96■□□□□ 0.47
LSM5-207ENST00000410044 ANKS1AQ92625 1134 aa17.96■□□□□ 0.47
LSM5-207ENST00000410044 ZKSCAN4Q969J2 545 aaPredicted RBP17.96■□□□□ 0.47
LSM5-207ENST00000410044 KANSL2Q9H9L4 492 aa17.96■□□□□ 0.47
LSM5-207ENST00000410044 IL17RBQ9NRM6 502 aa17.96■□□□□ 0.47
LSM5-207ENST00000410044 ZBTB21Q9ULJ3 1066 aa17.96■□□□□ 0.47
LSM5-207ENST00000410044 OTOFQ9HC10 1997 aa17.96■□□□□ 0.47
LSM5-207ENST00000410044 TMEM88BA6NKF7 163 aa17.95■□□□□ 0.46
LSM5-207ENST00000410044 GDF11O95390 407 aa17.95■□□□□ 0.46
LSM5-207ENST00000410044 GH2P01242 217 aa17.95■□□□□ 0.46
LSM5-207ENST00000410044 MCM5P33992 734 aa17.95■□□□□ 0.46
LSM5-207ENST00000410044 VGLL4Q14135 290 aa17.95■□□□□ 0.46
LSM5-207ENST00000410044 FBXL16Q8N461 479 aa17.95■□□□□ 0.46
LSM5-207ENST00000410044 JAKMIP1Q96N16 626 aaKnown RBP17.95■□□□□ 0.46
LSM5-207ENST00000410044 TTC14Q96N46 770 aa17.95■□□□□ 0.46
LSM5-207ENST00000410044 TBC1D2Q9BYX2 928 aa17.95■□□□□ 0.46
LSM5-207ENST00000410044 CSADQ9Y600 493 aa17.95■□□□□ 0.46
LSM5-207ENST00000410044 SNCAIPQ9Y6H5 919 aa17.95■□□□□ 0.46
LSM5-207ENST00000410044 PTPRAP18433 802 aa17.94■□□□□ 0.46
LSM5-207ENST00000410044 ANTXR2P58335 489 aa17.94■□□□□ 0.46
LSM5-207ENST00000410044 COL9A3Q14050 684 aaPredicted RBP17.94■□□□□ 0.46
LSM5-207ENST00000410044 SEPT2Q15019 361 aa17.94■□□□□ 0.46
LSM5-207ENST00000410044 PPP4R3BQ5MIZ7 849 aa17.94■□□□□ 0.46
LSM5-207ENST00000410044 BLOC1S2Q6QNY1 142 aa17.94■□□□□ 0.46
LSM5-207ENST00000410044 RUFY3Q7L099 469 aa17.94■□□□□ 0.46
LSM5-207ENST00000410044 SAPCD2Q86UD0 394 aa17.94■□□□□ 0.46
LSM5-207ENST00000410044 IQCA1Q86XH1 822 aa17.94■□□□□ 0.46
LSM5-207ENST00000410044 SIAH1Q8IUQ4 282 aa17.94■□□□□ 0.46
LSM5-207ENST00000410044 IGDCC4Q8TDY8 1250 aa17.94■□□□□ 0.46
LSM5-207ENST00000410044 MKL1Q969V6 931 aa17.94■□□□□ 0.46
LSM5-207ENST00000410044 HHIPL1Q96JK4 782 aa17.94■□□□□ 0.46
LSM5-207ENST00000410044 TMEM87BQ96K49 555 aa17.94■□□□□ 0.46
LSM5-207ENST00000410044 ALDH8A1Q9H2A2 487 aaPredicted RBP17.94■□□□□ 0.46
LSM5-207ENST00000410044 MTMR4Q9NYA4 1195 aa17.94■□□□□ 0.46
LSM5-207ENST00000410044 NYAP2Q9P242 653 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms