RNA–Protein interactions for RNA: ENST00000409884.5

LRRTM4-204, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRRTM4, Length 2,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-204ENST00000409884 MCTP1Q6DN14 999 aa12.45□□□□□ -0.42
LRRTM4-204ENST00000409884 SLC44A5Q8NCS7 719 aa12.45□□□□□ -0.42
LRRTM4-204ENST00000409884 TBC1D22AQ8WUA7 517 aa12.45□□□□□ -0.42
LRRTM4-204ENST00000409884 FEZ1Q99689 392 aa12.45□□□□□ -0.42
LRRTM4-204ENST00000409884 LY9Q9HBG7 655 aa12.45□□□□□ -0.42
LRRTM4-204ENST00000409884 ANGEL1Q9UNK9 670 aaKnown RBP12.45□□□□□ -0.42
LRRTM4-204ENST00000409884 COL4A5P29400 1685 aa12.45□□□□□ -0.42
LRRTM4-204ENST00000409884 TIAM2Q8IVF5 1701 aa12.45□□□□□ -0.42
LRRTM4-204ENST00000409884 GPR75-ASB3A0A0A6YYF3 556 aa12.45□□□□□ -0.42
LRRTM4-204ENST00000409884 VPS37CA5D8V6 355 aaPredicted RBP12.45□□□□□ -0.42
LRRTM4-204ENST00000409884 IFIT3O14879 490 aaKnown RBP12.45□□□□□ -0.42
LRRTM4-204ENST00000409884 DHX16O60231 1041 aaKnown RBP12.45□□□□□ -0.42
LRRTM4-204ENST00000409884 RANBP6O60518 1105 aaKnown RBP12.45□□□□□ -0.42
LRRTM4-204ENST00000409884 SLURP2P0DP57 97 aa12.45□□□□□ -0.42
LRRTM4-204ENST00000409884 TMEM67Q5HYA8 995 aa12.45□□□□□ -0.42
LRRTM4-204ENST00000409884 FAM47AQ5JRC9 791 aa12.45□□□□□ -0.42
LRRTM4-204ENST00000409884 ICE2Q659A1 982 aa12.45□□□□□ -0.42
LRRTM4-204ENST00000409884 FERMT3Q86UX7 667 aa12.45□□□□□ -0.42
LRRTM4-204ENST00000409884 MICU3Q86XE3 530 aa12.45□□□□□ -0.42
LRRTM4-204ENST00000409884 NSUN7Q8NE18 718 aaKnown RBP12.45□□□□□ -0.42
LRRTM4-204ENST00000409884 GDPD2Q9HCC8 539 aa12.45□□□□□ -0.42
LRRTM4-204ENST00000409884 RBM28Q9NW13 759 aaKnown RBP12.45□□□□□ -0.42
LRRTM4-204ENST00000409884 CDK5RAP2Q96SN8 1893 aa12.44□□□□□ -0.42
LRRTM4-204ENST00000409884 BAG3O95817 575 aa12.44□□□□□ -0.42
LRRTM4-204ENST00000409884 GSTO1P78417 241 aa12.44□□□□□ -0.42
LRRTM4-204ENST00000409884 KIAA2012Q0VF49 1180 aa12.44□□□□□ -0.42
LRRTM4-204ENST00000409884 FAM173BQ6P4H8 233 aa12.44□□□□□ -0.42
LRRTM4-204ENST00000409884 CDC37L1Q7L3B6 337 aa12.44□□□□□ -0.42
LRRTM4-204ENST00000409884 TEX11Q8IYF3 940 aa12.44□□□□□ -0.42
LRRTM4-204ENST00000409884 PDCL2Q8N4E4 241 aa12.44□□□□□ -0.42
LRRTM4-204ENST00000409884 ATP8A2Q9NTI2 1148 aa12.44□□□□□ -0.42
LRRTM4-204ENST00000409884 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.44□□□□□ -0.42
LRRTM4-204ENST00000409884 OGFRQ9NZT2 677 aa12.44□□□□□ -0.42
LRRTM4-204ENST00000409884 RSPH14Q9UHP6 348 aa12.44□□□□□ -0.42
LRRTM4-204ENST00000409884 ANAPC4Q9UJX5 808 aa12.44□□□□□ -0.42
LRRTM4-204ENST00000409884 MTMR6Q9Y217 621 aa12.44□□□□□ -0.42
LRRTM4-204ENST00000409884 TCHHQ07283 1943 aa12.44□□□□□ -0.42
LRRTM4-204ENST00000409884 DLEC1Q9Y238 1755 aa12.43□□□□□ -0.42
LRRTM4-204ENST00000409884 PTPDC1A2A3K4 754 aa12.43□□□□□ -0.42
LRRTM4-204ENST00000409884 UBE2Q2LH0YL09 131 aa12.43□□□□□ -0.42
LRRTM4-204ENST00000409884 ADD1P35611 737 aaKnown RBP12.43□□□□□ -0.42
LRRTM4-204ENST00000409884 CACNB3P54284 484 aa12.43□□□□□ -0.42
LRRTM4-204ENST00000409884 EVCP57679 992 aa12.43□□□□□ -0.42
LRRTM4-204ENST00000409884 PPP4CP60510 307 aa12.43□□□□□ -0.42
LRRTM4-204ENST00000409884 PICALMQ13492 652 aa12.43□□□□□ -0.42
LRRTM4-204ENST00000409884 ZKSCAN8Q15776 578 aaPredicted RBP12.43□□□□□ -0.42
LRRTM4-204ENST00000409884 LARP1BQ659C4 914 aaKnown RBP12.43□□□□□ -0.42
LRRTM4-204ENST00000409884 PODNQ7Z5L7 613 aa12.43□□□□□ -0.42
LRRTM4-204ENST00000409884 GAS2L3Q86XJ1 694 aa12.43□□□□□ -0.42
LRRTM4-204ENST00000409884 ZNF274Q96GC6 653 aaPredicted RBP12.43□□□□□ -0.42
LRRTM4-204ENST00000409884 GJB4Q9NTQ9 266 aa12.43□□□□□ -0.42
LRRTM4-204ENST00000409884 ZBTB12Q9Y330 459 aaPredicted RBP12.43□□□□□ -0.42
LRRTM4-204ENST00000409884 KIAA1551Q9HCM1 1747 aa12.43□□□□□ -0.42
LRRTM4-204ENST00000409884 KIF1CO43896 1103 aaKnown RBP12.43□□□□□ -0.42
LRRTM4-204ENST00000409884 LDHCP07864 332 aa12.43□□□□□ -0.42
LRRTM4-204ENST00000409884 GUCY2CP25092 1073 aa12.43□□□□□ -0.42
LRRTM4-204ENST00000409884 POLD1P28340 1107 aa12.43□□□□□ -0.42
LRRTM4-204ENST00000409884 CDC27P30260 824 aa12.43□□□□□ -0.42
LRRTM4-204ENST00000409884 DACT2Q5SW24 774 aa12.43□□□□□ -0.42
LRRTM4-204ENST00000409884 APOA5Q6Q788 366 aa12.43□□□□□ -0.42
LRRTM4-204ENST00000409884 NFXL1Q6ZNB6 911 aa12.43□□□□□ -0.42
LRRTM4-204ENST00000409884 FBXL16Q8N461 479 aa12.43□□□□□ -0.42
LRRTM4-204ENST00000409884 BORCS6Q96GS4 357 aa12.43□□□□□ -0.42
LRRTM4-204ENST00000409884 GBP4Q96PP9 640 aa12.43□□□□□ -0.42
LRRTM4-204ENST00000409884 SGIP1Q9BQI5 828 aa12.43□□□□□ -0.42
LRRTM4-204ENST00000409884 KRT23Q9C075 422 aa12.43□□□□□ -0.42
LRRTM4-204ENST00000409884 CNNM2Q9H8M5 875 aa12.43□□□□□ -0.42
LRRTM4-204ENST00000409884 DDX4Q9NQI0 724 aaKnown RBP12.43□□□□□ -0.42
LRRTM4-204ENST00000409884 GAKO14976 1311 aa12.43□□□□□ -0.42
LRRTM4-204ENST00000409884 RAD17O75943 681 aa12.42□□□□□ -0.42
LRRTM4-204ENST00000409884 ZSCAN22P10073 491 aaPredicted RBP12.42□□□□□ -0.42
LRRTM4-204ENST00000409884 FDPSP14324 419 aaKnown RBP12.42□□□□□ -0.42
LRRTM4-204ENST00000409884 CCDC93Q567U6 631 aa12.42□□□□□ -0.42
LRRTM4-204ENST00000409884 GIMAP6Q6P9H5 292 aa12.42□□□□□ -0.42
LRRTM4-204ENST00000409884 CMTR1Q8N1G2 835 aaKnown RBP12.42□□□□□ -0.42
LRRTM4-204ENST00000409884 NOL10Q9BSC4 688 aaKnown RBP12.42□□□□□ -0.42
LRRTM4-204ENST00000409884 FLT1P17948 1338 aa12.42□□□□□ -0.42
LRRTM4-204ENST00000409884 KIF13BQ9NQT8 1826 aa12.42□□□□□ -0.42
LRRTM4-204ENST00000409884 PTGER2P43116 358 aa12.42□□□□□ -0.42
LRRTM4-204ENST00000409884 GUCY1B3Q02153 619 aa12.42□□□□□ -0.42
LRRTM4-204ENST00000409884 C12orf60Q5U649 245 aa12.42□□□□□ -0.42
LRRTM4-204ENST00000409884 OTUD7BQ6GQQ9 843 aa12.42□□□□□ -0.42
LRRTM4-204ENST00000409884 PRIMPOLQ96LW4 560 aa12.42□□□□□ -0.42
LRRTM4-204ENST00000409884 PIM2Q9P1W9 311 aa12.42□□□□□ -0.42
LRRTM4-204ENST00000409884 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.42□□□□□ -0.42
LRRTM4-204ENST00000409884 TNKSO95271 1327 aa12.41□□□□□ -0.42
LRRTM4-204ENST00000409884 WDR19Q8NEZ3 1342 aa12.41□□□□□ -0.42
LRRTM4-204ENST00000409884 WDR33Q9C0J8 1336 aaKnown RBP12.41□□□□□ -0.42
LRRTM4-204ENST00000409884 NASPP49321 788 aaPredicted RBP12.41□□□□□ -0.42
LRRTM4-204ENST00000409884 NFIAQ12857 509 aa12.41□□□□□ -0.42
LRRTM4-204ENST00000409884 APOBEC3HQ6NTF7 200 aaKnown RBP12.41□□□□□ -0.42
LRRTM4-204ENST00000409884 CCDC82Q8N4S0 544 aa12.41□□□□□ -0.42
LRRTM4-204ENST00000409884 ENAHQ8N8S7 591 aaPredicted RBP12.41□□□□□ -0.42
LRRTM4-204ENST00000409884 NLGN2Q8NFZ4 835 aa12.41□□□□□ -0.42
LRRTM4-204ENST00000409884 SMARCC2Q8TAQ2 1214 aa12.41□□□□□ -0.42
LRRTM4-204ENST00000409884 ESR2Q92731 530 aa12.41□□□□□ -0.42
LRRTM4-204ENST00000409884 FAM163AQ96GL9 167 aaPredicted RBP12.41□□□□□ -0.42
LRRTM4-204ENST00000409884 AIFM3Q96NN9 605 aa12.41□□□□□ -0.42
LRRTM4-204ENST00000409884 RNF41Q9H4P4 317 aaPredicted RBP12.41□□□□□ -0.42
LRRTM4-204ENST00000409884 FAM217BQ9NTX9 383 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms