RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 TSPY8P0CW00 308 aa14.84□□□□□ -0.03
PMS1-204ENST00000409823 TOB2Q14106 344 aaPredicted RBP14.84□□□□□ -0.03
PMS1-204ENST00000409823 CLEC10AQ8IUN9 316 aa14.84□□□□□ -0.03
PMS1-204ENST00000409823 APOBEC3FQ8IUX4 373 aaKnown RBP14.84□□□□□ -0.03
PMS1-204ENST00000409823 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.84□□□□□ -0.03
PMS1-204ENST00000409823 PGAP2Q9UHJ9 254 aa14.84□□□□□ -0.03
PMS1-204ENST00000409823 LAMA4Q16363 1823 aa14.84□□□□□ -0.03
PMS1-204ENST00000409823 VEGFAP15692 232 aaPredicted RBP14.84□□□□□ -0.03
PMS1-204ENST00000409823 MAP1SQ66K74 1059 aaPredicted RBP14.84□□□□□ -0.03
PMS1-204ENST00000409823 SULF1Q8IWU6 871 aa14.84□□□□□ -0.03
PMS1-204ENST00000409823 IFIT3O14879 490 aaKnown RBP14.83□□□□□ -0.04
PMS1-204ENST00000409823 ORC4O43929 436 aa14.83□□□□□ -0.04
PMS1-204ENST00000409823 AKR1B1P15121 316 aa14.83□□□□□ -0.04
PMS1-204ENST00000409823 RRP1BQ14684 758 aaKnown RBP14.83□□□□□ -0.04
PMS1-204ENST00000409823 USP48Q86UV5 1035 aa14.83□□□□□ -0.04
PMS1-204ENST00000409823 GLIS2Q9BZE0 524 aaPredicted RBP14.83□□□□□ -0.04
PMS1-204ENST00000409823 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.83□□□□□ -0.04
PMS1-204ENST00000409823 LAMB1P07942 1786 aa14.83□□□□□ -0.04
PMS1-204ENST00000409823 APOBRQ0VD83 1088 aa14.83□□□□□ -0.04
PMS1-204ENST00000409823 STK3Q13188 491 aa14.83□□□□□ -0.04
PMS1-204ENST00000409823 UBAC1Q9BSL1 405 aa14.83□□□□□ -0.04
PMS1-204ENST00000409823 POLR2AP24928 1970 aaKnown RBP14.82□□□□□ -0.04
PMS1-204ENST00000409823 FMR1Q06787 632 aaKnown RBP eCLIP14.82□□□□□ -0.04
PMS1-204ENST00000409823 TMEM67Q5HYA8 995 aa14.82□□□□□ -0.04
PMS1-204ENST00000409823 FOXP4Q8IVH2 680 aaPredicted RBP14.82□□□□□ -0.04
PMS1-204ENST00000409823 EHD4Q9H223 541 aa14.82□□□□□ -0.04
PMS1-204ENST00000409823 ZNF287Q9HBT7 754 aa14.82□□□□□ -0.04
PMS1-204ENST00000409823 IL17RBQ9NRM6 502 aa14.82□□□□□ -0.04
PMS1-204ENST00000409823 FOXD4L1Q9NU39 408 aa14.82□□□□□ -0.04
PMS1-204ENST00000409823 TNKSO95271 1327 aa14.82□□□□□ -0.04
PMS1-204ENST00000409823 LARGE1O95461 756 aa14.82□□□□□ -0.04
PMS1-204ENST00000409823 JAG1P78504 1218 aa14.82□□□□□ -0.04
PMS1-204ENST00000409823 CERKLQ49MI3 558 aaPredicted RBP14.82□□□□□ -0.04
PMS1-204ENST00000409823 PNMA8AQ86V59 439 aaPredicted RBP14.82□□□□□ -0.04
PMS1-204ENST00000409823 HSCBQ8IWL3 235 aa14.82□□□□□ -0.04
PMS1-204ENST00000409823 TPCN1Q9ULQ1 816 aa14.82□□□□□ -0.04
PMS1-204ENST00000409823 RXRAP19793 462 aa14.81□□□□□ -0.04
PMS1-204ENST00000409823 IQCA1Q86XH1 822 aa14.81□□□□□ -0.04
PMS1-204ENST00000409823 IGDCC4Q8TDY8 1250 aa14.81□□□□□ -0.04
PMS1-204ENST00000409823 ZSCAN10Q96SZ4 725 aaPredicted RBP14.81□□□□□ -0.04
PMS1-204ENST00000409823 MYL10Q9BUA6 226 aa14.81□□□□□ -0.04
PMS1-204ENST00000409823 STX8Q9UNK0 236 aa14.81□□□□□ -0.04
PMS1-204ENST00000409823 MTMR7Q9Y216 660 aa14.81□□□□□ -0.04
PMS1-204ENST00000409823 PCP11498 1178 aaKnown RBP14.81□□□□□ -0.04
PMS1-204ENST00000409823 ENAHQ8N8S7 591 aaPredicted RBP14.81□□□□□ -0.04
PMS1-204ENST00000409823 SWAP70Q9UH65 585 aa14.81□□□□□ -0.04
PMS1-204ENST00000409823 SIPA1L1O43166 1804 aa14.8□□□□□ -0.04
PMS1-204ENST00000409823 NFXL1Q6ZNB6 911 aa14.8□□□□□ -0.04
PMS1-204ENST00000409823 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.8□□□□□ -0.04
PMS1-204ENST00000409823 BRPF3Q9ULD4 1205 aa14.8□□□□□ -0.04
PMS1-204ENST00000409823 TRAF5O00463 557 aa14.8□□□□□ -0.04
PMS1-204ENST00000409823 SH2B2O14492 632 aaPredicted RBP14.8□□□□□ -0.04
PMS1-204ENST00000409823 PPFIA3O75145 1194 aa14.8□□□□□ -0.04
PMS1-204ENST00000409823 ATP2B2Q01814 1243 aa14.8□□□□□ -0.04
PMS1-204ENST00000409823 RAB3GAP1Q15042 981 aa14.8□□□□□ -0.04
PMS1-204ENST00000409823 CCDC144CPQ8IYA2 1237 aa14.8□□□□□ -0.04
PMS1-204ENST00000409823 NECAB1Q8N987 351 aa14.8□□□□□ -0.04
PMS1-204ENST00000409823 CEP95Q96GE4 821 aa14.8□□□□□ -0.04
PMS1-204ENST00000409823 LY9Q9HBG7 655 aa14.8□□□□□ -0.04
PMS1-204ENST00000409823 HERC5Q9UII4 1024 aaKnown RBP14.8□□□□□ -0.04
PMS1-204ENST00000409823 ANGEL1Q9UNK9 670 aaKnown RBP14.8□□□□□ -0.04
PMS1-204ENST00000409823 ERICH2A1L162 156 aa14.79□□□□□ -0.04
PMS1-204ENST00000409823 GH2P01242 217 aa14.79□□□□□ -0.04
PMS1-204ENST00000409823 SART3Q15020 963 aaKnown RBP14.79□□□□□ -0.04
PMS1-204ENST00000409823 ME3Q16798 604 aa14.79□□□□□ -0.04
PMS1-204ENST00000409823 TATDN1Q6P1N9 297 aa14.79□□□□□ -0.04
PMS1-204ENST00000409823 CCDC84Q86UT8 332 aaPredicted RBP14.79□□□□□ -0.04
PMS1-204ENST00000409823 TMX3Q96JJ7 454 aa14.79□□□□□ -0.04
PMS1-204ENST00000409823 PITPNM2Q9BZ72 1349 aa14.79□□□□□ -0.04
PMS1-204ENST00000409823 WTAPQ15007 396 aa14.79□□□□□ -0.04
PMS1-204ENST00000409823 METTL16Q86W50 562 aaKnown RBP14.79□□□□□ -0.04
PMS1-204ENST00000409823 ZC3H15Q8WU90 426 aaKnown RBP14.79□□□□□ -0.04
PMS1-204ENST00000409823 ZNF408Q9H9D4 720 aa14.79□□□□□ -0.04
PMS1-204ENST00000409823 WDR90Q96KV7 1748 aa14.79□□□□□ -0.04
PMS1-204ENST00000409823 KLF18A0A0U1RQI7 1052 aa14.79□□□□□ -0.04
PMS1-204ENST00000409823 K7ELQ4 463 aaPredicted RBP14.79□□□□□ -0.04
PMS1-204ENST00000409823 CCT2P78371 535 aaKnown RBP14.79□□□□□ -0.04
PMS1-204ENST00000409823 IFIT1BQ5T764 474 aaKnown RBP14.79□□□□□ -0.04
PMS1-204ENST00000409823 SNX21Q969T3 373 aa14.79□□□□□ -0.04
PMS1-204ENST00000409823 LIMCH1Q9UPQ0 1083 aa14.79□□□□□ -0.04
PMS1-204ENST00000409823 SCN4AP35499 1836 aa14.78□□□□□ -0.04
PMS1-204ENST00000409823 COL2A1P02458 1487 aaPredicted RBP14.78□□□□□ -0.04
PMS1-204ENST00000409823 SEPT2Q15019 361 aa14.78□□□□□ -0.04
PMS1-204ENST00000409823 ABCB5Q2M3G0 1257 aa14.78□□□□□ -0.04
PMS1-204ENST00000409823 ZKSCAN4Q969J2 545 aaPredicted RBP14.78□□□□□ -0.04
PMS1-204ENST00000409823 TMEM87BQ96K49 555 aa14.78□□□□□ -0.04
PMS1-204ENST00000409823 INPP5BP32019 993 aa14.78□□□□□ -0.04
PMS1-204ENST00000409823 BECN1Q14457 450 aa14.78□□□□□ -0.04
PMS1-204ENST00000409823 SEC23AQ15436 765 aa14.78□□□□□ -0.04
PMS1-204ENST00000409823 RCSD1Q6JBY9 416 aa14.78□□□□□ -0.04
PMS1-204ENST00000409823 MOB2Q70IA6 237 aa14.78□□□□□ -0.04
PMS1-204ENST00000409823 RASGRP2Q7LDG7 609 aa14.78□□□□□ -0.04
PMS1-204ENST00000409823 MICU3Q86XE3 530 aa14.78□□□□□ -0.04
PMS1-204ENST00000409823 NEDD1Q8NHV4 660 aa14.78□□□□□ -0.04
PMS1-204ENST00000409823 NCOA5Q9HCD5 579 aaKnown RBP14.78□□□□□ -0.04
PMS1-204ENST00000409823 RAD21O60216 631 aa14.77□□□□□ -0.04
PMS1-204ENST00000409823 ANKRD1Q15327 319 aa14.77□□□□□ -0.04
PMS1-204ENST00000409823 CDC37L1Q7L3B6 337 aa14.77□□□□□ -0.04
PMS1-204ENST00000409823 CDCA5Q96FF9 252 aa14.77□□□□□ -0.04
PMS1-204ENST00000409823 IPO9Q96P70 1041 aaKnown RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 191.5 ms