RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 FAM84BQ96KN1 310 aaPredicted RBP8.77□□□□□ -1.01
CXCR4-202ENST00000409817 LEMD3Q9Y2U8 911 aa8.77□□□□□ -1.01
CXCR4-202ENST00000409817 UBR3Q6ZT12 1888 aa8.76□□□□□ -1.01
CXCR4-202ENST00000409817 A0A0G2JLW4 131 aa8.76□□□□□ -1.01
CXCR4-202ENST00000409817 GSG1L2A8MUP6 293 aa8.76□□□□□ -1.01
CXCR4-202ENST00000409817 CTDNEP1O95476 244 aa8.76□□□□□ -1.01
CXCR4-202ENST00000409817 TM4SF1P30408 202 aa8.76□□□□□ -1.01
CXCR4-202ENST00000409817 HIBADHP31937 336 aaKnown RBP8.76□□□□□ -1.01
CXCR4-202ENST00000409817 GYG1P46976 350 aa8.76□□□□□ -1.01
CXCR4-202ENST00000409817 NASPP49321 788 aaPredicted RBP8.76□□□□□ -1.01
CXCR4-202ENST00000409817 RCAN1P53805 252 aa8.76□□□□□ -1.01
CXCR4-202ENST00000409817 ANTXR2P58335 489 aa8.76□□□□□ -1.01
CXCR4-202ENST00000409817 GRAPQ13588 217 aa8.76□□□□□ -1.01
CXCR4-202ENST00000409817 NFIXQ14938 502 aa8.76□□□□□ -1.01
CXCR4-202ENST00000409817 AKNAD1Q5T1N1 836 aa8.76□□□□□ -1.01
CXCR4-202ENST00000409817 FAM182BQ5T319 152 aa8.76□□□□□ -1.01
CXCR4-202ENST00000409817 LCE2DQ5TA82 110 aaPredicted RBP8.76□□□□□ -1.01
CXCR4-202ENST00000409817 CPLX2Q6PUV4 134 aaKnown RBP8.76□□□□□ -1.01
CXCR4-202ENST00000409817 KRT27Q7Z3Y8 459 aa8.76□□□□□ -1.01
CXCR4-202ENST00000409817 SGMS1Q86VZ5 419 aa8.76□□□□□ -1.01
CXCR4-202ENST00000409817 GRAPLQ8TC17 118 aaPredicted RBP8.76□□□□□ -1.01
CXCR4-202ENST00000409817 STAG1Q8WVM7 1258 aa8.76□□□□□ -1.01
CXCR4-202ENST00000409817 CHAMP1Q96JM3 812 aa8.76□□□□□ -1.01
CXCR4-202ENST00000409817 SLC4A4Q9Y6R1 1079 aa8.76□□□□□ -1.01
CXCR4-202ENST00000409817 COL4A1P02462 1669 aa8.75□□□□□ -1.01
CXCR4-202ENST00000409817 MAGEB6P1A0A0J9YX57 407 aa8.75□□□□□ -1.01
CXCR4-202ENST00000409817 KLF18A0A0U1RQI7 1052 aa8.75□□□□□ -1.01
CXCR4-202ENST00000409817 SH2B2O14492 632 aaPredicted RBP8.75□□□□□ -1.01
CXCR4-202ENST00000409817 CPLX1O14810 134 aa8.75□□□□□ -1.01
CXCR4-202ENST00000409817 GADD45BO75293 160 aaPredicted RBP8.75□□□□□ -1.01
CXCR4-202ENST00000409817 CYP7A1P22680 504 aa8.75□□□□□ -1.01
CXCR4-202ENST00000409817 TDO2P48775 406 aa8.75□□□□□ -1.01
CXCR4-202ENST00000409817 ST5P78524 1137 aa8.75□□□□□ -1.01
CXCR4-202ENST00000409817 LSM11P83369 360 aaKnown RBP eCLIP8.75□□□□□ -1.01
CXCR4-202ENST00000409817 VAC14Q08AM6 782 aa8.75□□□□□ -1.01
CXCR4-202ENST00000409817 RESTQ13127 1097 aa8.75□□□□□ -1.01
CXCR4-202ENST00000409817 SART3Q15020 963 aaKnown RBP8.75□□□□□ -1.01
CXCR4-202ENST00000409817 NR6A1Q15406 480 aa8.75□□□□□ -1.01
CXCR4-202ENST00000409817 FOXD4L6Q3SYB3 417 aaPredicted RBP8.75□□□□□ -1.01
CXCR4-202ENST00000409817 SPTY2D1Q68D10 685 aaPredicted RBP8.75□□□□□ -1.01
CXCR4-202ENST00000409817 FOXD4L3Q6VB84 417 aaPredicted RBP8.75□□□□□ -1.01
CXCR4-202ENST00000409817 MFSD6Q6ZSS7 791 aa8.75□□□□□ -1.01
CXCR4-202ENST00000409817 C15orf52Q6ZUT6 534 aaKnown RBP8.75□□□□□ -1.01
CXCR4-202ENST00000409817 RETREG3Q86VR2 466 aa8.75□□□□□ -1.01
CXCR4-202ENST00000409817 TBC1D10CQ8IV04 446 aa8.75□□□□□ -1.01
CXCR4-202ENST00000409817 TMTC2Q8N394 836 aa8.75□□□□□ -1.01
CXCR4-202ENST00000409817 ARMT1Q9H993 441 aa8.75□□□□□ -1.01
CXCR4-202ENST00000409817 EPB41L4AQ9HCS5 686 aaPredicted RBP8.75□□□□□ -1.01
CXCR4-202ENST00000409817 LRRC4BQ9NT99 713 aa8.75□□□□□ -1.01
CXCR4-202ENST00000409817 RAI14Q9P0K7 980 aa8.75□□□□□ -1.01
CXCR4-202ENST00000409817 ABCF2Q9UG63 623 aa8.75□□□□□ -1.01
CXCR4-202ENST00000409817 ANAPC4Q9UJX5 808 aa8.75□□□□□ -1.01
CXCR4-202ENST00000409817 BRPF3Q9ULD4 1205 aa8.75□□□□□ -1.01
CXCR4-202ENST00000409817 NSFL1CQ9UNZ2 370 aaKnown RBP8.75□□□□□ -1.01
CXCR4-202ENST00000409817 CHD4Q14839 1912 aa8.75□□□□□ -1.01
CXCR4-202ENST00000409817 NID2Q14112 1375 aa8.75□□□□□ -1.01
CXCR4-202ENST00000409817 SYCE3A1L190 88 aa8.74□□□□□ -1.01
CXCR4-202ENST00000409817 GOLGA8BA8MQT2 603 aa8.74□□□□□ -1.01
CXCR4-202ENST00000409817 CCT2P78371 535 aaKnown RBP8.74□□□□□ -1.01
CXCR4-202ENST00000409817 CCDC173Q0VFZ6 552 aa8.74□□□□□ -1.01
CXCR4-202ENST00000409817 CRY2Q49AN0 593 aa8.74□□□□□ -1.01
CXCR4-202ENST00000409817 KMT5BQ4FZB7 885 aa8.74□□□□□ -1.01
CXCR4-202ENST00000409817 CHST3Q7LGC8 479 aa8.74□□□□□ -1.01
CXCR4-202ENST00000409817 LCORLQ8N3X6 602 aa8.74□□□□□ -1.01
CXCR4-202ENST00000409817 RETREG2Q8NC44 543 aa8.74□□□□□ -1.01
CXCR4-202ENST00000409817 DDX11Q96FC9 970 aa8.74□□□□□ -1.01
CXCR4-202ENST00000409817 SPATA32Q96LK8 384 aa8.74□□□□□ -1.01
CXCR4-202ENST00000409817 ZNF396Q96N95 335 aaPredicted RBP8.74□□□□□ -1.01
CXCR4-202ENST00000409817 BRIP1Q9BX63 1249 aa8.74□□□□□ -1.01
CXCR4-202ENST00000409817 NAP1L2Q9ULW6 460 aaPredicted RBP8.74□□□□□ -1.01
CXCR4-202ENST00000409817 MYH13Q9UKX3 1938 aa8.74□□□□□ -1.01
CXCR4-202ENST00000409817 DUOX1Q9NRD9 1551 aa8.74□□□□□ -1.01
CXCR4-202ENST00000409817 COL1A1P02452 1464 aaPredicted RBP8.74□□□□□ -1.01
CXCR4-202ENST00000409817 CACNA1SQ13698 1873 aa8.74□□□□□ -1.01
CXCR4-202ENST00000409817 MAST2Q6P0Q8 1798 aa8.74□□□□□ -1.01
CXCR4-202ENST00000409817 GOLGA6L4A6NEF3 574 aa8.74□□□□□ -1.01
CXCR4-202ENST00000409817 PPP2R5BQ15173 497 aa8.74□□□□□ -1.01
CXCR4-202ENST00000409817 RNF19BQ6ZMZ0 732 aa8.74□□□□□ -1.01
CXCR4-202ENST00000409817 TMC4Q7Z404 712 aa8.74□□□□□ -1.01
CXCR4-202ENST00000409817 TTC6Q86TZ1 520 aa8.74□□□□□ -1.01
CXCR4-202ENST00000409817 FERMT3Q86UX7 667 aa8.74□□□□□ -1.01
CXCR4-202ENST00000409817 AMIGO3Q86WK7 504 aa8.74□□□□□ -1.01
CXCR4-202ENST00000409817 LRCH3Q96II8 777 aa8.74□□□□□ -1.01
CXCR4-202ENST00000409817 RIOK1Q9BRS2 568 aaKnown RBP8.74□□□□□ -1.01
CXCR4-202ENST00000409817 TSPY26PQ9H489 355 aa8.74□□□□□ -1.01
CXCR4-202ENST00000409817 HPS5Q9UPZ3 1129 aa8.74□□□□□ -1.01
CXCR4-202ENST00000409817 XDHP47989 1333 aa8.74□□□□□ -1.01
CXCR4-202ENST00000409817 TAF1P21675 1872 aa8.73□□□□□ -1.01
CXCR4-202ENST00000409817 TNRC6CQ9HCJ0 1690 aaKnown RBP8.73□□□□□ -1.01
CXCR4-202ENST00000409817 ERICH2A1L162 156 aa8.73□□□□□ -1.01
CXCR4-202ENST00000409817 B4E1Z4 1266 aa8.73□□□□□ -1.01
CXCR4-202ENST00000409817 GYS1P13807 737 aa8.73□□□□□ -1.01
CXCR4-202ENST00000409817 METAP2P50579 478 aaKnown RBP eCLIP8.73□□□□□ -1.01
CXCR4-202ENST00000409817 ZNF772Q68DY9 489 aaPredicted RBP8.73□□□□□ -1.01
CXCR4-202ENST00000409817 PRR5LQ6MZQ0 368 aa8.73□□□□□ -1.01
CXCR4-202ENST00000409817 APOA5Q6Q788 366 aa8.73□□□□□ -1.01
CXCR4-202ENST00000409817 BLOC1S3Q6QNY0 202 aa8.73□□□□□ -1.01
CXCR4-202ENST00000409817 SYNE3Q6ZMZ3 975 aa8.73□□□□□ -1.01
CXCR4-202ENST00000409817 BRAPQ7Z569 592 aa8.73□□□□□ -1.01
CXCR4-202ENST00000409817 CERS3Q8IU89 383 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms