RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 CCDC17Q96LX7 622 aa19.7■□□□□ 0.74
SUMO1-208ENST00000409627 GINM1Q9NU53 330 aa19.7■□□□□ 0.74
SUMO1-208ENST00000409627 TLL2Q9Y6L7 1015 aa19.7■□□□□ 0.74
SUMO1-208ENST00000409627 PHIPQ8WWQ0 1821 aa19.69■□□□□ 0.74
SUMO1-208ENST00000409627 PRDM1O75626 825 aa19.69■□□□□ 0.74
SUMO1-208ENST00000409627 MCCP23508 829 aa19.69■□□□□ 0.74
SUMO1-208ENST00000409627 VGLL4Q14135 290 aa19.69■□□□□ 0.74
SUMO1-208ENST00000409627 TSGA10IPQ3SY00 556 aa19.69■□□□□ 0.74
SUMO1-208ENST00000409627 SCYL3Q8IZE3 742 aa19.69■□□□□ 0.74
SUMO1-208ENST00000409627 ZKSCAN4Q969J2 545 aaPredicted RBP19.69■□□□□ 0.74
SUMO1-208ENST00000409627 BACH2Q9BYV9 841 aa19.69■□□□□ 0.74
SUMO1-208ENST00000409627 CREBZFQ9NS37 354 aa19.69■□□□□ 0.74
SUMO1-208ENST00000409627 CSADQ9Y600 493 aa19.69■□□□□ 0.74
SUMO1-208ENST00000409627 NEDD4P46934 1319 aa19.69■□□□□ 0.74
SUMO1-208ENST00000409627 E7EWF7 191 aa19.68■□□□□ 0.74
SUMO1-208ENST00000409627 GDF11O95390 407 aa19.68■□□□□ 0.74
SUMO1-208ENST00000409627 ZKSCAN1P17029 563 aaPredicted RBP19.68■□□□□ 0.74
SUMO1-208ENST00000409627 ABCB5Q2M3G0 1257 aa19.68■□□□□ 0.74
SUMO1-208ENST00000409627 SAPCD2Q86UD0 394 aa19.68■□□□□ 0.74
SUMO1-208ENST00000409627 ZNF444Q8N0Y2 327 aaPredicted RBP19.68■□□□□ 0.74
SUMO1-208ENST00000409627 CNNM2Q9H8M5 875 aa19.68■□□□□ 0.74
SUMO1-208ENST00000409627 INCENPQ9NQS7 918 aa19.68■□□□□ 0.74
SUMO1-208ENST00000409627 SNCAIPQ9Y6H5 919 aa19.68■□□□□ 0.74
SUMO1-208ENST00000409627 TAF6LQ9Y6J9 622 aa19.68■□□□□ 0.74
SUMO1-208ENST00000409627 PLIN4Q96Q06 1357 aa19.68■□□□□ 0.74
SUMO1-208ENST00000409627 ASNSP08243 561 aa19.67■□□□□ 0.74
SUMO1-208ENST00000409627 AKR1B1P15121 316 aa19.67■□□□□ 0.74
SUMO1-208ENST00000409627 HUNKP57058 714 aa19.67■□□□□ 0.74
SUMO1-208ENST00000409627 C1QTNF8P60827 252 aa19.67■□□□□ 0.74
SUMO1-208ENST00000409627 STOX1Q6ZVD7 989 aa19.67■□□□□ 0.74
SUMO1-208ENST00000409627 HHIPL1Q96JK4 782 aa19.67■□□□□ 0.74
SUMO1-208ENST00000409627 KRT23Q9C075 422 aa19.67■□□□□ 0.74
SUMO1-208ENST00000409627 CABP5Q9NP86 173 aa19.67■□□□□ 0.74
SUMO1-208ENST00000409627 ZBTB21Q9ULJ3 1066 aa19.67■□□□□ 0.74
SUMO1-208ENST00000409627 JAG1P78504 1218 aa19.66■□□□□ 0.74
SUMO1-208ENST00000409627 RRP12Q5JTH9 1297 aaKnown RBP19.66■□□□□ 0.74
SUMO1-208ENST00000409627 TMEM179Q6ZVK1 233 aa19.66■□□□□ 0.74
SUMO1-208ENST00000409627 RASEFQ8IZ41 740 aa19.66■□□□□ 0.74
SUMO1-208ENST00000409627 ESR2Q92731 530 aa19.66■□□□□ 0.74
SUMO1-208ENST00000409627 CLMNQ96JQ2 1002 aa19.66■□□□□ 0.74
SUMO1-208ENST00000409627 PICK1Q9NRD5 415 aa19.66■□□□□ 0.74
SUMO1-208ENST00000409627 TOMM22Q9NS69 142 aa19.66■□□□□ 0.74
SUMO1-208ENST00000409627 ABT1Q9ULW3 272 aaKnown RBP19.66■□□□□ 0.74
SUMO1-208ENST00000409627 RANBP6O60518 1105 aaKnown RBP19.65■□□□□ 0.74
SUMO1-208ENST00000409627 GH2P01242 217 aa19.65■□□□□ 0.74
SUMO1-208ENST00000409627 TRDNQ13061 729 aa19.65■□□□□ 0.74
SUMO1-208ENST00000409627 KRT32Q14532 448 aa19.65■□□□□ 0.74
SUMO1-208ENST00000409627 SHROOM1Q2M3G4 852 aaPredicted RBP19.65■□□□□ 0.74
SUMO1-208ENST00000409627 NEDD1Q8NHV4 660 aa19.65■□□□□ 0.74
SUMO1-208ENST00000409627 NCOA7Q8NI08 942 aa19.65■□□□□ 0.74
SUMO1-208ENST00000409627 SNX14Q9Y5W7 946 aa19.65■□□□□ 0.74
SUMO1-208ENST00000409627 SPDYE5A6NIY4 337 aa19.64■□□□□ 0.73
SUMO1-208ENST00000409627 TSPY2A6NKD2 308 aa19.64■□□□□ 0.73
SUMO1-208ENST00000409627 B4E1Z4 1266 aa19.64■□□□□ 0.73
SUMO1-208ENST00000409627 MPHOSPH10O00566 681 aaKnown RBP19.64■□□□□ 0.73
SUMO1-208ENST00000409627 TSPY3P0CV98 308 aa19.64■□□□□ 0.73
SUMO1-208ENST00000409627 TSPY8P0CW00 308 aa19.64■□□□□ 0.73
SUMO1-208ENST00000409627 PTPRAP18433 802 aa19.64■□□□□ 0.73
SUMO1-208ENST00000409627 GUCY1A2P33402 732 aa19.64■□□□□ 0.73
SUMO1-208ENST00000409627 TFAP4Q01664 338 aa19.64■□□□□ 0.73
SUMO1-208ENST00000409627 FAM47AQ5JRC9 791 aa19.64■□□□□ 0.73
SUMO1-208ENST00000409627 RALYLQ86SE5 291 aaKnown RBP19.64■□□□□ 0.73
SUMO1-208ENST00000409627 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.64■□□□□ 0.73
SUMO1-208ENST00000409627 TBC1D2Q9BYX2 928 aa19.64■□□□□ 0.73
SUMO1-208ENST00000409627 ELP3Q9H9T3 547 aa19.64■□□□□ 0.73
SUMO1-208ENST00000409627 UPF2Q9HAU5 1272 aaKnown RBP19.64■□□□□ 0.73
SUMO1-208ENST00000409627 PTPRFP10586 1907 aa19.63■□□□□ 0.73
SUMO1-208ENST00000409627 MYH4Q9Y623 1939 aa19.63■□□□□ 0.73
SUMO1-208ENST00000409627 IGKV6D-41A0A0C4DH26 115 aa19.63■□□□□ 0.73
SUMO1-208ENST00000409627 USP17L5A8MUK1 530 aa19.63■□□□□ 0.73
SUMO1-208ENST00000409627 KDM4AO75164 1064 aa19.63■□□□□ 0.73
SUMO1-208ENST00000409627 ANAPC15P60006 121 aa19.63■□□□□ 0.73
SUMO1-208ENST00000409627 RGMBQ6NW40 437 aa19.63■□□□□ 0.73
SUMO1-208ENST00000409627 ERO1BQ86YB8 467 aa19.63■□□□□ 0.73
SUMO1-208ENST00000409627 SLC10A4Q96EP9 437 aa19.63■□□□□ 0.73
SUMO1-208ENST00000409627 RASSF10A6NK89 507 aa19.62■□□□□ 0.73
SUMO1-208ENST00000409627 PPATQ06203 517 aa19.62■□□□□ 0.73
SUMO1-208ENST00000409627 SEPT2Q15019 361 aa19.62■□□□□ 0.73
SUMO1-208ENST00000409627 RAB3GAP1Q15042 981 aa19.62■□□□□ 0.73
SUMO1-208ENST00000409627 MB21D2Q8IYB1 491 aaPredicted RBP19.62■□□□□ 0.73
SUMO1-208ENST00000409627 NKX2-3Q8TAU0 364 aa19.62■□□□□ 0.73
SUMO1-208ENST00000409627 IL17RAQ96F46 866 aa19.62■□□□□ 0.73
SUMO1-208ENST00000409627 TCP11L1Q9NUJ3 509 aa19.62■□□□□ 0.73
SUMO1-208ENST00000409627 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.62■□□□□ 0.73
SUMO1-208ENST00000409627 HSPA6P17066 643 aa19.61■□□□□ 0.73
SUMO1-208ENST00000409627 ADCK5Q3MIX3 580 aa19.61■□□□□ 0.73
SUMO1-208ENST00000409627 RASAL3Q86YV0 1011 aa19.61■□□□□ 0.73
SUMO1-208ENST00000409627 OPTNQ96CV9 577 aa19.61■□□□□ 0.73
SUMO1-208ENST00000409627 NEK1Q96PY6 1258 aa19.61■□□□□ 0.73
SUMO1-208ENST00000409627 KANSL2Q9H9L4 492 aa19.61■□□□□ 0.73
SUMO1-208ENST00000409627 AS3MTQ9HBK9 375 aa19.61■□□□□ 0.73
SUMO1-208ENST00000409627 ZSWIM5Q9P217 1185 aa19.61■□□□□ 0.73
SUMO1-208ENST00000409627 RBM25P49756 843 aaKnown RBP19.6■□□□□ 0.73
SUMO1-208ENST00000409627 ZNF157P51786 506 aaPredicted RBP19.6■□□□□ 0.73
SUMO1-208ENST00000409627 ICA1Q05084 483 aa19.6■□□□□ 0.73
SUMO1-208ENST00000409627 PPIL2Q13356 520 aa19.6■□□□□ 0.73
SUMO1-208ENST00000409627 PPP4R3BQ5MIZ7 849 aa19.6■□□□□ 0.73
SUMO1-208ENST00000409627 CYB5R4Q7L1T6 521 aa19.6■□□□□ 0.73
SUMO1-208ENST00000409627 IQCA1Q86XH1 822 aa19.6■□□□□ 0.73
SUMO1-208ENST00000409627 CNKSR2Q8WXI2 1034 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 164.3 ms