RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 ZBTB9Q96C00 473 aa13.36□□□□□ -0.27
SMCR8-201ENST00000406438 RBSNQ9H1K0 784 aa13.36□□□□□ -0.27
SMCR8-201ENST00000406438 KCNG1Q9UIX4 513 aa13.36□□□□□ -0.27
SMCR8-201ENST00000406438 YTHDC2Q9H6S0 1430 aaKnown RBP13.36□□□□□ -0.27
SMCR8-201ENST00000406438 MAEAQ7L5Y9 396 aa13.36□□□□□ -0.27
SMCR8-201ENST00000406438 C10orf67Q8IYJ2 551 aa13.36□□□□□ -0.27
SMCR8-201ENST00000406438 RASSF2P50749 326 aa13.36□□□□□ -0.27
SMCR8-201ENST00000406438 C11orf95C9JLR9 678 aaPredicted RBP13.36□□□□□ -0.27
SMCR8-201ENST00000406438 PPP4R1Q8TF05 950 aa13.36□□□□□ -0.27
SMCR8-201ENST00000406438 TEKT1Q969V4 418 aa13.36□□□□□ -0.27
SMCR8-201ENST00000406438 ZNF277Q9NRM2 450 aaPredicted RBP13.36□□□□□ -0.27
SMCR8-201ENST00000406438 PARP2Q9UGN5 583 aa13.36□□□□□ -0.27
SMCR8-201ENST00000406438 TSNAXIP1Q2TAA8 658 aa13.36□□□□□ -0.27
SMCR8-201ENST00000406438 CEP85Q6P2H3 762 aa13.36□□□□□ -0.27
SMCR8-201ENST00000406438 PIK3AP1Q6ZUJ8 805 aa13.36□□□□□ -0.27
SMCR8-201ENST00000406438 C8orf58Q8NAV2 365 aa13.36□□□□□ -0.27
SMCR8-201ENST00000406438 GGA1Q9UJY5 639 aa13.36□□□□□ -0.27
SMCR8-201ENST00000406438 KCNH3Q9ULD8 1083 aa13.36□□□□□ -0.27
SMCR8-201ENST00000406438 RPS6KA2Q15349 733 aa13.36□□□□□ -0.27
SMCR8-201ENST00000406438 OTUD6AQ7L8S5 288 aa13.36□□□□□ -0.27
SMCR8-201ENST00000406438 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.36□□□□□ -0.27
SMCR8-201ENST00000406438 ZNF408Q9H9D4 720 aa13.36□□□□□ -0.27
SMCR8-201ENST00000406438 RIMS2Q9UQ26 1411 aa13.36□□□□□ -0.27
SMCR8-201ENST00000406438 ERCC3P19447 782 aa13.36□□□□□ -0.27
SMCR8-201ENST00000406438 YWHAEP62258 255 aaKnown RBP13.36□□□□□ -0.27
SMCR8-201ENST00000406438 USH1GQ495M9 461 aa13.36□□□□□ -0.27
SMCR8-201ENST00000406438 BCAP29Q9UHQ4 241 aa13.36□□□□□ -0.27
SMCR8-201ENST00000406438 B4E1Z4 1266 aa13.35□□□□□ -0.27
SMCR8-201ENST00000406438 CLCN1P35523 988 aa13.35□□□□□ -0.27
SMCR8-201ENST00000406438 SLC1A4P43007 532 aa13.35□□□□□ -0.27
SMCR8-201ENST00000406438 CWF19L2Q2TBE0 894 aaKnown RBP13.35□□□□□ -0.27
SMCR8-201ENST00000406438 SPC25Q9HBM1 224 aa13.35□□□□□ -0.27
SMCR8-201ENST00000406438 IMPACTQ9P2X3 320 aa13.35□□□□□ -0.27
SMCR8-201ENST00000406438 DDX39AO00148 427 aaKnown RBP13.35□□□□□ -0.27
SMCR8-201ENST00000406438 KRT19P08727 400 aa13.35□□□□□ -0.27
SMCR8-201ENST00000406438 HHATQ5VTY9 493 aa13.35□□□□□ -0.27
SMCR8-201ENST00000406438 NCAPH2Q6IBW4 605 aa13.35□□□□□ -0.27
SMCR8-201ENST00000406438 HVCN1Q96D96 273 aa13.35□□□□□ -0.27
SMCR8-201ENST00000406438 TSKSQ9UJT2 592 aa13.35□□□□□ -0.27
SMCR8-201ENST00000406438 GNA14O95837 355 aa13.35□□□□□ -0.27
SMCR8-201ENST00000406438 CFAP221Q4G0U5 840 aa13.35□□□□□ -0.27
SMCR8-201ENST00000406438 KRBA2Q6ZNG9 492 aa13.35□□□□□ -0.27
SMCR8-201ENST00000406438 RILPQ96NA2 401 aa13.35□□□□□ -0.27
SMCR8-201ENST00000406438 PCDHB15Q9Y5E8 787 aa13.35□□□□□ -0.27
SMCR8-201ENST00000406438 ZNF518AQ6AHZ1 1483 aa13.35□□□□□ -0.27
SMCR8-201ENST00000406438 ZBED4O75132 1171 aa13.35□□□□□ -0.27
SMCR8-201ENST00000406438 ZNF853P0CG23 659 aa13.35□□□□□ -0.27
SMCR8-201ENST00000406438 HIBADHP31937 336 aaKnown RBP13.35□□□□□ -0.27
SMCR8-201ENST00000406438 EIF4A2Q14240 407 aaKnown RBP13.35□□□□□ -0.27
SMCR8-201ENST00000406438 USTQ9Y2C2 406 aa13.35□□□□□ -0.27
SMCR8-201ENST00000406438 NDUFAB1O14561 156 aa13.34□□□□□ -0.27
SMCR8-201ENST00000406438 RSAD2Q8WXG1 361 aa13.34□□□□□ -0.27
SMCR8-201ENST00000406438 RAB17Q9H0T7 212 aa13.34□□□□□ -0.27
SMCR8-201ENST00000406438 AATFQ9NY61 560 aaKnown RBP eCLIP13.34□□□□□ -0.27
SMCR8-201ENST00000406438 MAPK8IP1Q9UQF2 711 aa13.34□□□□□ -0.27
SMCR8-201ENST00000406438 PLXNC1O60486 1568 aa13.34□□□□□ -0.27
SMCR8-201ENST00000406438 A0A1B0GUA9 196 aa13.34□□□□□ -0.27
SMCR8-201ENST00000406438 CLSTN2Q9H4D0 955 aa13.34□□□□□ -0.27
SMCR8-201ENST00000406438 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.34□□□□□ -0.27
SMCR8-201ENST00000406438 H0YIN7 160 aa13.34□□□□□ -0.27
SMCR8-201ENST00000406438 FBLN1P23142 703 aa13.34□□□□□ -0.27
SMCR8-201ENST00000406438 GCC2Q8IWJ2 1684 aa13.34□□□□□ -0.27
SMCR8-201ENST00000406438 ANO1Q5XXA6 986 aa13.34□□□□□ -0.27
SMCR8-201ENST00000406438 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.34□□□□□ -0.27
SMCR8-201ENST00000406438 NUCKS1Q9H1E3 243 aaKnown RBP13.34□□□□□ -0.27
SMCR8-201ENST00000406438 ITGA6P23229 1130 aa13.34□□□□□ -0.27
SMCR8-201ENST00000406438 WDR46O15213 610 aaKnown RBP13.34□□□□□ -0.27
SMCR8-201ENST00000406438 TXKP42681 527 aa13.34□□□□□ -0.27
SMCR8-201ENST00000406438 MAIP1Q8WWC4 291 aa13.34□□□□□ -0.27
SMCR8-201ENST00000406438 HAUS1Q96CS2 278 aa13.34□□□□□ -0.27
SMCR8-201ENST00000406438 SLC5A4Q9NY91 659 aa13.34□□□□□ -0.27
SMCR8-201ENST00000406438 OGFRQ9NZT2 677 aa13.34□□□□□ -0.27
SMCR8-201ENST00000406438 SECISBP2LQ93073 1101 aaKnown RBP13.34□□□□□ -0.27
SMCR8-201ENST00000406438 A0A1B0GUL7 405 aa13.33□□□□□ -0.27
SMCR8-201ENST00000406438 CUTAO60888 179 aa13.33□□□□□ -0.27
SMCR8-201ENST00000406438 GTF3C6Q969F1 213 aa13.33□□□□□ -0.27
SMCR8-201ENST00000406438 CFAP74Q9C0B2 1584 aa13.33□□□□□ -0.27
SMCR8-201ENST00000406438 IRX4P78413 519 aa13.33□□□□□ -0.28
SMCR8-201ENST00000406438 POTEDQ86YR6 584 aa13.33□□□□□ -0.28
SMCR8-201ENST00000406438 CCDC105Q8IYK2 499 aa13.33□□□□□ -0.28
SMCR8-201ENST00000406438 NR1I2O75469 434 aa13.33□□□□□ -0.28
SMCR8-201ENST00000406438 KDM3AQ9Y4C1 1321 aa13.33□□□□□ -0.28
SMCR8-201ENST00000406438 KRT81Q14533 505 aa13.33□□□□□ -0.28
SMCR8-201ENST00000406438 PARP10Q53GL7 1025 aa13.33□□□□□ -0.28
SMCR8-201ENST00000406438 SND1Q7KZF4 910 aaKnown RBP eCLIP13.33□□□□□ -0.28
SMCR8-201ENST00000406438 PEX26Q7Z412 305 aa13.33□□□□□ -0.28
SMCR8-201ENST00000406438 PPP1R12CQ9BZL4 782 aa13.33□□□□□ -0.28
SMCR8-201ENST00000406438 DCTPP1Q9H773 170 aa13.33□□□□□ -0.28
SMCR8-201ENST00000406438 A2MP01023 1474 aa13.33□□□□□ -0.28
SMCR8-201ENST00000406438 KRT15P19012 456 aa13.33□□□□□ -0.28
SMCR8-201ENST00000406438 CHMLP26374 656 aa13.33□□□□□ -0.28
SMCR8-201ENST00000406438 PHBP35232 272 aa13.33□□□□□ -0.28
SMCR8-201ENST00000406438 ADCY7P51828 1080 aa13.33□□□□□ -0.28
SMCR8-201ENST00000406438 PPFIA1Q13136 1202 aa13.33□□□□□ -0.28
SMCR8-201ENST00000406438 MTMR3Q13615 1198 aa13.33□□□□□ -0.28
SMCR8-201ENST00000406438 BEND3Q5T5X7 828 aa13.33□□□□□ -0.28
SMCR8-201ENST00000406438 KRT12Q99456 494 aa13.33□□□□□ -0.28
SMCR8-201ENST00000406438 ANKFY1Q9P2R3 1169 aa13.33□□□□□ -0.28
SMCR8-201ENST00000406438 METTL13Q8N6R0 699 aa13.32□□□□□ -0.28
SMCR8-201ENST00000406438 POSTNQ15063 836 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms