RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 UTP14CQ5TAP6 766 aaKnown RBP8.92□□□□□ -0.98
USP47-203ENST00000399455 FBXO11Q86XK2 927 aa8.92□□□□□ -0.98
USP47-203ENST00000399455 ZNF341Q9BYN7 854 aa8.92□□□□□ -0.98
USP47-203ENST00000399455 NCAPD2Q15021 1401 aa8.92□□□□□ -0.98
USP47-203ENST00000399455 B4E1Z4 1266 aa8.92□□□□□ -0.98
USP47-203ENST00000399455 N4BP3O15049 544 aa8.92□□□□□ -0.98
USP47-203ENST00000399455 CYLC1P35663 651 aaPredicted RBP8.92□□□□□ -0.98
USP47-203ENST00000399455 TIMM10P62072 90 aa8.92□□□□□ -0.98
USP47-203ENST00000399455 KIAA0753Q2KHM9 967 aa8.92□□□□□ -0.98
USP47-203ENST00000399455 RUFY3Q7L099 469 aa8.92□□□□□ -0.98
USP47-203ENST00000399455 TEKT3Q9BXF9 490 aa8.92□□□□□ -0.98
USP47-203ENST00000399455 HACL1Q9UJ83 578 aa8.92□□□□□ -0.98
USP47-203ENST00000399455 CAMSAP1Q5T5Y3 1602 aa8.91□□□□□ -0.98
USP47-203ENST00000399455 ABCA9Q8IUA7 1624 aa8.91□□□□□ -0.98
USP47-203ENST00000399455 H0YHG0 523 aa8.91□□□□□ -0.98
USP47-203ENST00000399455 CHL1O00533 1208 aa8.91□□□□□ -0.98
USP47-203ENST00000399455 GNAT1P11488 350 aa8.91□□□□□ -0.98
USP47-203ENST00000399455 UBXN2AP68543 259 aa8.91□□□□□ -0.98
USP47-203ENST00000399455 TFAP4Q01664 338 aa8.91□□□□□ -0.98
USP47-203ENST00000399455 CCDC50Q8IVM0 306 aa8.91□□□□□ -0.98
USP47-203ENST00000399455 FAM43AQ8N2R8 423 aa8.91□□□□□ -0.98
USP47-203ENST00000399455 DHX58Q96C10 678 aa8.91□□□□□ -0.98
USP47-203ENST00000399455 CARD14Q9BXL6 1004 aa8.91□□□□□ -0.98
USP47-203ENST00000399455 CDK12Q9NYV4 1490 aaPredicted RBP8.91□□□□□ -0.98
USP47-203ENST00000399455 NDC80O14777 642 aa8.91□□□□□ -0.98
USP47-203ENST00000399455 GIGYF1O75420 1035 aaPredicted RBP8.91□□□□□ -0.98
USP47-203ENST00000399455 USP17L8P0C7I0 530 aa8.91□□□□□ -0.98
USP47-203ENST00000399455 LEKR1Q6ZMV7 388 aa8.91□□□□□ -0.98
USP47-203ENST00000399455 ZBTB33Q86T24 672 aa8.91□□□□□ -0.98
USP47-203ENST00000399455 SYNE4Q8N205 404 aa8.91□□□□□ -0.98
USP47-203ENST00000399455 ODF2LQ9ULJ1 636 aa8.91□□□□□ -0.98
USP47-203ENST00000399455 ATP8B3O60423 1300 aa8.91□□□□□ -0.98
USP47-203ENST00000399455 SPHKAPQ2M3C7 1700 aa8.91□□□□□ -0.98
USP47-203ENST00000399455 ATP2A1O14983 1001 aa8.91□□□□□ -0.98
USP47-203ENST00000399455 APOBRQ0VD83 1088 aa8.91□□□□□ -0.98
USP47-203ENST00000399455 MKRN3Q13064 507 aaKnown RBP8.91□□□□□ -0.98
USP47-203ENST00000399455 MTIF3Q9H2K0 278 aaKnown RBP8.91□□□□□ -0.98
USP47-203ENST00000399455 ABCD1P33897 745 aa8.91□□□□□ -0.98
USP47-203ENST00000399455 GABPAQ06546 454 aa8.91□□□□□ -0.98
USP47-203ENST00000399455 IQUBQ8NA54 791 aa8.91□□□□□ -0.98
USP47-203ENST00000399455 SLC17A8Q8NDX2 589 aa8.91□□□□□ -0.98
USP47-203ENST00000399455 CROCC2H7BZ55 1655 aa8.91□□□□□ -0.98
USP47-203ENST00000399455 PSDA5PKW4 1024 aaPredicted RBP8.91□□□□□ -0.98
USP47-203ENST00000399455 COPB2P35606 906 aa8.91□□□□□ -0.98
USP47-203ENST00000399455 R3HDM1Q15032 1099 aaKnown RBP8.91□□□□□ -0.98
USP47-203ENST00000399455 GSTA5Q7RTV2 222 aa8.91□□□□□ -0.98
USP47-203ENST00000399455 METTL23Q86XA0 190 aa8.91□□□□□ -0.98
USP47-203ENST00000399455 LBHD1Q9BQE6 289 aaPredicted RBP8.91□□□□□ -0.98
USP47-203ENST00000399455 ANGEL1Q9UNK9 670 aaKnown RBP8.91□□□□□ -0.98
USP47-203ENST00000399455 TYW5A2RUC4 315 aaKnown RBP8.91□□□□□ -0.98
USP47-203ENST00000399455 NEMFO60524 1076 aa8.91□□□□□ -0.98
USP47-203ENST00000399455 SND1Q7KZF4 910 aaKnown RBP eCLIP8.91□□□□□ -0.98
USP47-203ENST00000399455 CCDC113Q9H0I3 377 aa8.91□□□□□ -0.98
USP47-203ENST00000399455 CIAO1O76071 339 aa8.9□□□□□ -0.98
USP47-203ENST00000399455 TNNC2P02585 160 aa8.9□□□□□ -0.98
USP47-203ENST00000399455 GYG1P46976 350 aa8.9□□□□□ -0.98
USP47-203ENST00000399455 SREBF2Q12772 1141 aa8.9□□□□□ -0.98
USP47-203ENST00000399455 ATL3Q6DD88 541 aa8.9□□□□□ -0.98
USP47-203ENST00000399455 MRPS27Q92552 414 aaKnown RBP8.9□□□□□ -0.98
USP47-203ENST00000399455 ZC3H13Q5T200 1668 aaKnown RBP8.9□□□□□ -0.98
USP47-203ENST00000399455 KIAA0754O94854 1291 aa8.9□□□□□ -0.98
USP47-203ENST00000399455 FAM193AP78312 1265 aa8.9□□□□□ -0.98
USP47-203ENST00000399455 CTDSPL2Q05D32 466 aa8.9□□□□□ -0.98
USP47-203ENST00000399455 CDHR1Q96JP9 859 aa8.9□□□□□ -0.98
USP47-203ENST00000399455 KRT19P08727 400 aa8.9□□□□□ -0.98
USP47-203ENST00000399455 MAP2K1Q02750 393 aaPredicted RBP8.9□□□□□ -0.98
USP47-203ENST00000399455 DCAF17Q5H9S7 520 aaPredicted RBP8.9□□□□□ -0.98
USP47-203ENST00000399455 PPP1R14CQ8TAE6 165 aa8.9□□□□□ -0.98
USP47-203ENST00000399455 ZNF830Q96NB3 372 aaPredicted RBP8.9□□□□□ -0.98
USP47-203ENST00000399455 RNASELQ05823 741 aaKnown RBP8.9□□□□□ -0.98
USP47-203ENST00000399455 GSDMBQ8TAX9 411 aa8.9□□□□□ -0.98
USP47-203ENST00000399455 RAB3IL1Q8TBN0 382 aa8.9□□□□□ -0.98
USP47-203ENST00000399455 PPM1EQ8WY54 764 aa8.9□□□□□ -0.98
USP47-203ENST00000399455 HAUS7Q99871 368 aa8.9□□□□□ -0.98
USP47-203ENST00000399455 FTOQ9C0B1 505 aaKnown RBP eCLIP8.9□□□□□ -0.98
USP47-203ENST00000399455 OATP04181 439 aa8.9□□□□□ -0.99
USP47-203ENST00000399455 ZSCAN22P10073 491 aaPredicted RBP8.9□□□□□ -0.99
USP47-203ENST00000399455 ATP2A2P16615 1042 aaKnown RBP8.9□□□□□ -0.99
USP47-203ENST00000399455 ZAP70P43403 619 aa8.9□□□□□ -0.99
USP47-203ENST00000399455 RAET1EQ8TD07 263 aa8.9□□□□□ -0.99
USP47-203ENST00000399455 CPLX3Q8WVH0 158 aa8.9□□□□□ -0.99
USP47-203ENST00000399455 TSPYL1Q9H0U9 437 aa8.9□□□□□ -0.99
USP47-203ENST00000399455 CDC42BPAQ5VT25 1732 aa8.9□□□□□ -0.99
USP47-203ENST00000399455 HEG1Q9ULI3 1381 aa8.9□□□□□ -0.99
USP47-203ENST00000399455 ECE1P42892 770 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 ELMOD1Q8N336 334 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 CCDC114Q96M63 670 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 NT5C3AQ9H0P0 336 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 DCTPP1Q9H773 170 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.89□□□□□ -0.99
USP47-203ENST00000399455 LAMC1P11047 1609 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 CEP135Q66GS9 1140 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 SLFN13Q68D06 897 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 MYCT1Q8N699 235 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 TESK2Q96S53 571 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 DBNDD2Q9BQY9 259 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 LARP6Q9BRS8 491 aaKnown RBP8.89□□□□□ -0.99
USP47-203ENST00000399455 ZMYM4Q5VZL5 1548 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 MYL3P08590 195 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 VWA3BQ502W6 1294 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms