RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 LNPKQ9C0E8 428 aa20.13■□□□□ 0.81
APTR-201ENST00000398043 ZFYVE28Q9HCC9 887 aa20.13■□□□□ 0.81
APTR-201ENST00000398043 MCM9Q9NXL9 1143 aa20.13■□□□□ 0.81
APTR-201ENST00000398043 GREB1LQ9C091 1923 aaPredicted RBP20.12■□□□□ 0.81
APTR-201ENST00000398043 TRIM75PA6NK02 468 aa20.12■□□□□ 0.81
APTR-201ENST00000398043 PDHXO00330 501 aa20.12■□□□□ 0.81
APTR-201ENST00000398043 TLR2O60603 784 aa20.12■□□□□ 0.81
APTR-201ENST00000398043 CYP2D6P10635 497 aa20.12■□□□□ 0.81
APTR-201ENST00000398043 FASTKD5Q7L8L6 764 aaKnown RBP20.12■□□□□ 0.81
APTR-201ENST00000398043 CHD1LQ86WJ1 897 aa20.12■□□□□ 0.81
APTR-201ENST00000398043 ZNF280CQ8ND82 737 aa20.12■□□□□ 0.81
APTR-201ENST00000398043 ZBTB47Q9UFB7 747 aaPredicted RBP20.12■□□□□ 0.81
APTR-201ENST00000398043 ZBTB21Q9ULJ3 1066 aa20.12■□□□□ 0.81
APTR-201ENST00000398043 SMIM22K7EJ46 135 aa20.11■□□□□ 0.81
APTR-201ENST00000398043 GDF11O95390 407 aa20.11■□□□□ 0.81
APTR-201ENST00000398043 POLR3DP05423 398 aaPredicted RBP20.11■□□□□ 0.81
APTR-201ENST00000398043 SPP2Q13103 211 aa20.11■□□□□ 0.81
APTR-201ENST00000398043 SH3D19Q5HYK7 790 aa20.11■□□□□ 0.81
APTR-201ENST00000398043 B4GALNT3Q6L9W6 998 aa20.11■□□□□ 0.81
APTR-201ENST00000398043 TRIM34Q9BYJ4 488 aa20.11■□□□□ 0.81
APTR-201ENST00000398043 SLC45A1Q9Y2W3 748 aa20.11■□□□□ 0.81
APTR-201ENST00000398043 HTTP42858 3142 aa20.1■□□□□ 0.81
APTR-201ENST00000398043 GSG1L2A8MUP6 293 aa20.1■□□□□ 0.81
APTR-201ENST00000398043 M0R2C6 588 aa20.1■□□□□ 0.81
APTR-201ENST00000398043 SP3Q02447 781 aa20.1■□□□□ 0.81
APTR-201ENST00000398043 C12orf60Q5U649 245 aa20.1■□□□□ 0.81
APTR-201ENST00000398043 C17orf99Q6UX52 265 aa20.1■□□□□ 0.81
APTR-201ENST00000398043 PLEKHM2Q8IWE5 1019 aa20.1■□□□□ 0.81
APTR-201ENST00000398043 OSBPL3Q9H4L5 887 aa20.1■□□□□ 0.81
APTR-201ENST00000398043 TAOK2Q9UL54 1235 aa20.1■□□□□ 0.81
APTR-201ENST00000398043 SLC4A4Q9Y6R1 1079 aa20.1■□□□□ 0.81
APTR-201ENST00000398043 GUCY1A2P33402 732 aa20.09■□□□□ 0.81
APTR-201ENST00000398043 ZMYM1Q5SVZ6 1142 aa20.09■□□□□ 0.81
APTR-201ENST00000398043 PROCA1Q8NCQ7 364 aaPredicted RBP20.09■□□□□ 0.81
APTR-201ENST00000398043 USP17L12C9JPN9 530 aa20.08■□□□□ 0.81
APTR-201ENST00000398043 USP17L21D6R901 530 aa20.08■□□□□ 0.81
APTR-201ENST00000398043 GPAA1O43292 621 aa20.08■□□□□ 0.81
APTR-201ENST00000398043 GH2P01242 217 aa20.08■□□□□ 0.81
APTR-201ENST00000398043 PKN2Q16513 984 aaKnown RBP20.08■□□□□ 0.81
APTR-201ENST00000398043 CERKLQ49MI3 558 aaPredicted RBP20.08■□□□□ 0.81
APTR-201ENST00000398043 CTR9Q6PD62 1173 aa20.08■□□□□ 0.81
APTR-201ENST00000398043 GADL1Q6ZQY3 521 aa20.08■□□□□ 0.81
APTR-201ENST00000398043 CD99L2Q8TCZ2 262 aa20.08■□□□□ 0.81
APTR-201ENST00000398043 EVI5LQ96CN4 794 aa20.08■□□□□ 0.81
APTR-201ENST00000398043 ERO1AQ96HE7 468 aa20.08■□□□□ 0.81
APTR-201ENST00000398043 SEC62Q99442 399 aaKnown RBP20.08■□□□□ 0.81
APTR-201ENST00000398043 FSD1Q9BTV5 496 aa20.08■□□□□ 0.81
APTR-201ENST00000398043 AS3MTQ9HBK9 375 aa20.08■□□□□ 0.81
APTR-201ENST00000398043 AGTPBP1Q9UPW5 1226 aa20.08■□□□□ 0.81
APTR-201ENST00000398043 CYP2D7A0A087X1C5 515 aa20.07■□□□□ 0.8
APTR-201ENST00000398043 HMGCS2P54868 508 aa20.07■□□□□ 0.8
APTR-201ENST00000398043 BACE1P56817 501 aa20.07■□□□□ 0.8
APTR-201ENST00000398043 LRRFIP1Q32MZ4 808 aaKnown RBP20.07■□□□□ 0.8
APTR-201ENST00000398043 TREML2Q5T2D2 321 aa20.07■□□□□ 0.8
APTR-201ENST00000398043 GIMAP6Q6P9H5 292 aa20.07■□□□□ 0.8
APTR-201ENST00000398043 OTOP1Q7RTM1 612 aa20.07■□□□□ 0.8
APTR-201ENST00000398043 SLC44A5Q8NCS7 719 aa20.07■□□□□ 0.8
APTR-201ENST00000398043 DYNLL2Q96FJ2 89 aa20.07■□□□□ 0.8
APTR-201ENST00000398043 EPB41L4AQ9HCS5 686 aaPredicted RBP20.07■□□□□ 0.8
APTR-201ENST00000398043 RLFQ13129 1914 aa20.07■□□□□ 0.8
APTR-201ENST00000398043 PARP14Q460N5 1801 aa20.06■□□□□ 0.8
APTR-201ENST00000398043 CYP2C8P10632 490 aa20.06■□□□□ 0.8
APTR-201ENST00000398043 ABCB5Q2M3G0 1257 aa20.06■□□□□ 0.8
APTR-201ENST00000398043 SBK1Q52WX2 424 aa20.06■□□□□ 0.8
APTR-201ENST00000398043 C19orf81C9J6K1 198 aa20.05■□□□□ 0.8
APTR-201ENST00000398043 FOXP2O15409 715 aa20.05■□□□□ 0.8
APTR-201ENST00000398043 BCRP11274 1271 aa20.05■□□□□ 0.8
APTR-201ENST00000398043 MTMR2Q13614 643 aa20.05■□□□□ 0.8
APTR-201ENST00000398043 C16orf86Q6ZW13 317 aa20.05■□□□□ 0.8
APTR-201ENST00000398043 TICAM2Q86XR7 235 aa20.05■□□□□ 0.8
APTR-201ENST00000398043 PARK7Q99497 189 aaKnown RBP20.05■□□□□ 0.8
APTR-201ENST00000398043 SWAP70Q9UH65 585 aa20.05■□□□□ 0.8
APTR-201ENST00000398043 CPA4Q9UI42 421 aa20.05■□□□□ 0.8
APTR-201ENST00000398043 MYH4Q9Y623 1939 aa20.04■□□□□ 0.8
APTR-201ENST00000398043 USP17L10C9JJH3 530 aa20.04■□□□□ 0.8
APTR-201ENST00000398043 GNAT2P19087 354 aa20.04■□□□□ 0.8
APTR-201ENST00000398043 CTGFP29279 349 aa20.04■□□□□ 0.8
APTR-201ENST00000398043 LACTBP83111 547 aaPredicted RBP20.04■□□□□ 0.8
APTR-201ENST00000398043 FBXO46Q6PJ61 603 aaPredicted RBP20.04■□□□□ 0.8
APTR-201ENST00000398043 ARPP21Q9UBL0 812 aaPredicted RBP20.04■□□□□ 0.8
APTR-201ENST00000398043 ROBO3Q96MS0 1386 aa20.04■□□□□ 0.8
APTR-201ENST00000398043 PATL2C9JE40 543 aaKnown RBP20.03■□□□□ 0.8
APTR-201ENST00000398043 PDE4AP27815 886 aa20.03■□□□□ 0.8
APTR-201ENST00000398043 CDK8P49336 464 aa20.03■□□□□ 0.8
APTR-201ENST00000398043 DDRGK1Q96HY6 314 aa20.03■□□□□ 0.8
APTR-201ENST00000398043 ARHGAP39Q9C0H5 1083 aa20.03■□□□□ 0.8
APTR-201ENST00000398043 EMILIN3Q9NT22 766 aa20.03■□□□□ 0.8
APTR-201ENST00000398043 TRIM17Q9Y577 477 aa20.03■□□□□ 0.8
APTR-201ENST00000398043 CAPN15O75808 1086 aa20.02■□□□□ 0.8
APTR-201ENST00000398043 HOXA7P31268 230 aaPredicted RBP20.02■□□□□ 0.8
APTR-201ENST00000398043 SEPT2Q15019 361 aa20.02■□□□□ 0.8
APTR-201ENST00000398043 ACER1Q8TDN7 264 aa20.02■□□□□ 0.8
APTR-201ENST00000398043 C12orf42Q96LP6 360 aa20.02■□□□□ 0.8
APTR-201ENST00000398043 HPS5Q9UPZ3 1129 aa20.02■□□□□ 0.8
APTR-201ENST00000398043 RAB3GAP1Q15042 981 aa20.01■□□□□ 0.79
APTR-201ENST00000398043 SIAH1Q8IUQ4 282 aa20.01■□□□□ 0.79
APTR-201ENST00000398043 IFNL3Q8IZI9 196 aa20.01■□□□□ 0.79
APTR-201ENST00000398043 KIAA1683Q9H0B3 1180 aa20.01■□□□□ 0.79
APTR-201ENST00000398043 ASCC2Q9H1I8 757 aaPredicted RBP20.01■□□□□ 0.79
APTR-201ENST00000398043 EFCC1Q9HA90 598 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms