RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 TMEM232C9JQI7 657 aa11.94□□□□□ -0.5
CPSF1P1-201ENST00000397477 RIMBP2O15034 1052 aa11.94□□□□□ -0.5
CPSF1P1-201ENST00000397477 ADKP55263 362 aaKnown RBP11.94□□□□□ -0.5
CPSF1P1-201ENST00000397477 EIF6P56537 245 aaKnown RBP11.94□□□□□ -0.5
CPSF1P1-201ENST00000397477 PDE4BQ07343 736 aa11.94□□□□□ -0.5
CPSF1P1-201ENST00000397477 PICALMQ13492 652 aa11.94□□□□□ -0.5
CPSF1P1-201ENST00000397477 POSTNQ15063 836 aa11.94□□□□□ -0.5
CPSF1P1-201ENST00000397477 MARCH6O60337 910 aa11.93□□□□□ -0.5
CPSF1P1-201ENST00000397477 LIFRP42702 1097 aa11.93□□□□□ -0.5
CPSF1P1-201ENST00000397477 TFAP4Q01664 338 aa11.93□□□□□ -0.5
CPSF1P1-201ENST00000397477 NOM1Q5C9Z4 860 aaKnown RBP11.93□□□□□ -0.5
CPSF1P1-201ENST00000397477 ENAHQ8N8S7 591 aaPredicted RBP11.93□□□□□ -0.5
CPSF1P1-201ENST00000397477 TGFBRAP1Q8WUH2 860 aa11.93□□□□□ -0.5
CPSF1P1-201ENST00000397477 PCMTD1Q96MG8 357 aaPredicted RBP11.93□□□□□ -0.5
CPSF1P1-201ENST00000397477 FAM217BQ9NTX9 383 aaPredicted RBP11.93□□□□□ -0.5
CPSF1P1-201ENST00000397477 CBFA2T2O43439 604 aa11.93□□□□□ -0.5
CPSF1P1-201ENST00000397477 RPGRQ92834 1020 aaKnown RBP11.93□□□□□ -0.5
CPSF1P1-201ENST00000397477 TSPY3P0CV98 308 aa11.93□□□□□ -0.5
CPSF1P1-201ENST00000397477 TSPY8P0CW00 308 aa11.93□□□□□ -0.5
CPSF1P1-201ENST00000397477 KARSQ15046 597 aaKnown RBP11.93□□□□□ -0.5
CPSF1P1-201ENST00000397477 RBM43Q6ZSC3 357 aaKnown RBP11.93□□□□□ -0.5
CPSF1P1-201ENST00000397477 TXNRD3Q86VQ6 643 aa11.93□□□□□ -0.5
CPSF1P1-201ENST00000397477 GPIHBP1Q8IV16 184 aa11.93□□□□□ -0.5
CPSF1P1-201ENST00000397477 SLC44A5Q8NCS7 719 aa11.93□□□□□ -0.5
CPSF1P1-201ENST00000397477 MRC1P22897 1456 aa11.92□□□□□ -0.5
CPSF1P1-201ENST00000397477 SPATA31A1Q5TZJ5 1347 aa11.92□□□□□ -0.5
CPSF1P1-201ENST00000397477 CCT6AP40227 531 aaKnown RBP11.92□□□□□ -0.5
CPSF1P1-201ENST00000397477 SPTLC3Q9NUV7 552 aa11.92□□□□□ -0.5
CPSF1P1-201ENST00000397477 TRPM3Q9HCF6 1732 aaPredicted RBP11.92□□□□□ -0.5
CPSF1P1-201ENST00000397477 LDHBP07195 334 aaKnown RBP11.92□□□□□ -0.5
CPSF1P1-201ENST00000397477 TERF1P54274 439 aa11.92□□□□□ -0.5
CPSF1P1-201ENST00000397477 CDCA7Q9BWT1 371 aaPredicted RBP11.92□□□□□ -0.5
CPSF1P1-201ENST00000397477 CCDC194A0A1B0GVG4 234 aa11.91□□□□□ -0.5
CPSF1P1-201ENST00000397477 NEMFO60524 1076 aa11.91□□□□□ -0.5
CPSF1P1-201ENST00000397477 NTRK3Q16288 839 aa11.91□□□□□ -0.5
CPSF1P1-201ENST00000397477 METTL16Q86W50 562 aaKnown RBP11.91□□□□□ -0.5
CPSF1P1-201ENST00000397477 STAG1Q8WVM7 1258 aa11.91□□□□□ -0.5
CPSF1P1-201ENST00000397477 ZNF215Q9UL58 517 aaPredicted RBP11.91□□□□□ -0.5
CPSF1P1-201ENST00000397477 SCN11AQ9UI33 1791 aa11.91□□□□□ -0.5
CPSF1P1-201ENST00000397477 ABCC12Q96J65 1359 aa11.91□□□□□ -0.5
CPSF1P1-201ENST00000397477 UBE4AQ14139 1066 aa11.91□□□□□ -0.5
CPSF1P1-201ENST00000397477 RRAGBQ5VZM2 374 aa11.91□□□□□ -0.5
CPSF1P1-201ENST00000397477 SGMS1Q86VZ5 419 aa11.91□□□□□ -0.5
CPSF1P1-201ENST00000397477 PPFIBP1Q86W92 1011 aa11.91□□□□□ -0.5
CPSF1P1-201ENST00000397477 DESI2Q9BSY9 194 aa11.91□□□□□ -0.5
CPSF1P1-201ENST00000397477 SAMSN1Q9NSI8 373 aaKnown RBP11.91□□□□□ -0.5
CPSF1P1-201ENST00000397477 KCPQ6ZWJ8 1503 aa11.91□□□□□ -0.5
CPSF1P1-201ENST00000397477 USP17L3A6NCW0 530 aa11.91□□□□□ -0.5
CPSF1P1-201ENST00000397477 USP17L4A6NCW7 530 aa11.91□□□□□ -0.5
CPSF1P1-201ENST00000397477 USP17L1Q7RTZ2 530 aa11.91□□□□□ -0.5
CPSF1P1-201ENST00000397477 ERCC3P19447 782 aa11.9□□□□□ -0.5
CPSF1P1-201ENST00000397477 EVCP57679 992 aa11.9□□□□□ -0.5
CPSF1P1-201ENST00000397477 PTGDRQ13258 359 aa11.9□□□□□ -0.5
CPSF1P1-201ENST00000397477 TTC38Q5R3I4 469 aa11.9□□□□□ -0.5
CPSF1P1-201ENST00000397477 MTERF4Q7Z6M4 381 aaKnown RBP11.9□□□□□ -0.5
CPSF1P1-201ENST00000397477 CCDC150Q8NCX0 1101 aa11.9□□□□□ -0.5
CPSF1P1-201ENST00000397477 SYMPKQ92797 1274 aaKnown RBP11.9□□□□□ -0.5
CPSF1P1-201ENST00000397477 ZNF804BA4D1E1 1349 aa11.9□□□□□ -0.5
CPSF1P1-201ENST00000397477 RTL9Q8NET4 1388 aa11.9□□□□□ -0.5
CPSF1P1-201ENST00000397477 RBM6P78332 1123 aaKnown RBP11.9□□□□□ -0.5
CPSF1P1-201ENST00000397477 CTR9Q6PD62 1173 aa11.9□□□□□ -0.5
CPSF1P1-201ENST00000397477 BSDC1Q9NW68 430 aaPredicted RBP11.9□□□□□ -0.5
CPSF1P1-201ENST00000397477 DACH1Q9UI36 760 aa11.9□□□□□ -0.5
CPSF1P1-201ENST00000397477 TOM1O60784 492 aa11.9□□□□□ -0.5
CPSF1P1-201ENST00000397477 PPP6R2O75170 966 aa11.9□□□□□ -0.5
CPSF1P1-201ENST00000397477 GNG11P61952 73 aa11.9□□□□□ -0.5
CPSF1P1-201ENST00000397477 ELF2Q15723 593 aa11.9□□□□□ -0.5
CPSF1P1-201ENST00000397477 TRAPPC3LQ5T215 181 aa11.9□□□□□ -0.5
CPSF1P1-201ENST00000397477 FAM196AQ6ZSG2 479 aa11.9□□□□□ -0.5
CPSF1P1-201ENST00000397477 UFL1O94874 794 aa11.89□□□□□ -0.51
CPSF1P1-201ENST00000397477 TXLNAP40222 546 aa11.89□□□□□ -0.51
CPSF1P1-201ENST00000397477 TOB1P50616 345 aaPredicted RBP11.89□□□□□ -0.51
CPSF1P1-201ENST00000397477 EARS2Q5JPH6 523 aaKnown RBP11.89□□□□□ -0.51
CPSF1P1-201ENST00000397477 RESP18Q5W5W9 173 aa11.89□□□□□ -0.51
CPSF1P1-201ENST00000397477 CNBD1Q8NA66 436 aa11.89□□□□□ -0.51
CPSF1P1-201ENST00000397477 LZTFL1Q9NQ48 299 aa11.89□□□□□ -0.51
CPSF1P1-201ENST00000397477 MAN1B1Q9UKM7 699 aa11.89□□□□□ -0.51
CPSF1P1-201ENST00000397477 PAXBP1Q9Y5B6 917 aa11.89□□□□□ -0.51
CPSF1P1-201ENST00000397477 MPHOSPH10O00566 681 aaKnown RBP11.89□□□□□ -0.51
CPSF1P1-201ENST00000397477 PTPAQ15257 358 aa11.89□□□□□ -0.51
CPSF1P1-201ENST00000397477 ALX1Q15699 326 aa11.89□□□□□ -0.51
CPSF1P1-201ENST00000397477 ARMCX5Q6P1M9 558 aa11.89□□□□□ -0.51
CPSF1P1-201ENST00000397477 FOXP4Q8IVH2 680 aaPredicted RBP11.89□□□□□ -0.51
CPSF1P1-201ENST00000397477 ZNF512BQ96KM6 892 aaPredicted RBP11.89□□□□□ -0.51
CPSF1P1-201ENST00000397477 NYXQ9GZU5 481 aa11.89□□□□□ -0.51
CPSF1P1-201ENST00000397477 VEGFAP15692 232 aaPredicted RBP11.89□□□□□ -0.51
CPSF1P1-201ENST00000397477 FILIP1LQ4L180 1135 aa11.89□□□□□ -0.51
CPSF1P1-201ENST00000397477 VPS16Q9H269 839 aa11.89□□□□□ -0.51
CPSF1P1-201ENST00000397477 USP21Q9UK80 565 aa11.89□□□□□ -0.51
CPSF1P1-201ENST00000397477 TPM1P09493 284 aa11.88□□□□□ -0.51
CPSF1P1-201ENST00000397477 SARM1Q6SZW1 724 aa11.88□□□□□ -0.51
CPSF1P1-201ENST00000397477 CTNND2Q9UQB3 1225 aa11.88□□□□□ -0.51
CPSF1P1-201ENST00000397477 ALS2Q96Q42 1657 aa11.88□□□□□ -0.51
CPSF1P1-201ENST00000397477 ZNF142P52746 1687 aaPredicted RBP11.88□□□□□ -0.51
CPSF1P1-201ENST00000397477 SSBP05455 408 aaKnown RBP eCLIP11.88□□□□□ -0.51
CPSF1P1-201ENST00000397477 KIF5BP33176 963 aa11.88□□□□□ -0.51
CPSF1P1-201ENST00000397477 ZNF710Q8N1W2 664 aa11.88□□□□□ -0.51
CPSF1P1-201ENST00000397477 ARHGEF1Q92888 912 aaKnown RBP11.88□□□□□ -0.51
CPSF1P1-201ENST00000397477 DCP1AQ9NPI6 582 aaPredicted RBP11.88□□□□□ -0.51
CPSF1P1-201ENST00000397477 ARFGEF2Q9Y6D5 1785 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms