RNA–Protein interactions for RNA: ENST00000396858.5

GAPDH-203, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-203ENST00000396858 SHROOM1Q2M3G4 852 aaPredicted RBP16.6■□□□□ 0.25
GAPDH-203ENST00000396858 PRAMEF18Q5VWM3 479 aa16.6■□□□□ 0.25
GAPDH-203ENST00000396858 SNX21Q969T3 373 aa16.6■□□□□ 0.25
GAPDH-203ENST00000396858 DCPSQ96C86 337 aaKnown RBP16.6■□□□□ 0.25
GAPDH-203ENST00000396858 UBAC1Q9BSL1 405 aa16.6■□□□□ 0.25
GAPDH-203ENST00000396858 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.6■□□□□ 0.25
GAPDH-203ENST00000396858 NMRK2Q9NPI5 230 aa16.6■□□□□ 0.25
GAPDH-203ENST00000396858 K7ELQ4 463 aaPredicted RBP16.59■□□□□ 0.25
GAPDH-203ENST00000396858 IFIT3O14879 490 aaKnown RBP16.59■□□□□ 0.25
GAPDH-203ENST00000396858 GDF11O95390 407 aa16.59■□□□□ 0.25
GAPDH-203ENST00000396858 TSPY3P0CV98 308 aa16.59■□□□□ 0.25
GAPDH-203ENST00000396858 TSPY8P0CW00 308 aa16.59■□□□□ 0.25
GAPDH-203ENST00000396858 TFAP4Q01664 338 aa16.59■□□□□ 0.25
GAPDH-203ENST00000396858 TMEM67Q5HYA8 995 aa16.59■□□□□ 0.25
GAPDH-203ENST00000396858 NBPF12Q5TAG4 269 aaPredicted RBP16.59■□□□□ 0.25
GAPDH-203ENST00000396858 DLK2Q6UY11 383 aa16.59■□□□□ 0.25
GAPDH-203ENST00000396858 KRT26Q7Z3Y9 468 aa16.59■□□□□ 0.25
GAPDH-203ENST00000396858 METTL16Q86W50 562 aaKnown RBP16.59■□□□□ 0.25
GAPDH-203ENST00000396858 CLEC10AQ8IUN9 316 aa16.59■□□□□ 0.25
GAPDH-203ENST00000396858 SULF1Q8IWU6 871 aa16.59■□□□□ 0.25
GAPDH-203ENST00000396858 RRAGCQ9HB90 399 aa16.59■□□□□ 0.25
GAPDH-203ENST00000396858 SENP2Q9HC62 589 aa16.59■□□□□ 0.25
GAPDH-203ENST00000396858 HERC5Q9UII4 1024 aaKnown RBP16.59■□□□□ 0.25
GAPDH-203ENST00000396858 PPP2R3BQ9Y5P8 575 aa16.59■□□□□ 0.25
GAPDH-203ENST00000396858 APOBRQ0VD83 1088 aa16.58■□□□□ 0.24
GAPDH-203ENST00000396858 BECN1Q14457 450 aa16.58■□□□□ 0.24
GAPDH-203ENST00000396858 SART3Q15020 963 aaKnown RBP16.58■□□□□ 0.24
GAPDH-203ENST00000396858 MIGA2Q7L4E1 593 aa16.58■□□□□ 0.24
GAPDH-203ENST00000396858 PNMA8AQ86V59 439 aaPredicted RBP16.58■□□□□ 0.24
GAPDH-203ENST00000396858 FOXP4Q8IVH2 680 aaPredicted RBP16.58■□□□□ 0.24
GAPDH-203ENST00000396858 ZNF444Q8N0Y2 327 aaPredicted RBP16.58■□□□□ 0.24
GAPDH-203ENST00000396858 TMEM87BQ96K49 555 aa16.58■□□□□ 0.24
GAPDH-203ENST00000396858 AGXT2Q9BYV1 514 aa16.58■□□□□ 0.24
GAPDH-203ENST00000396858 LY9Q9HBG7 655 aa16.58■□□□□ 0.24
GAPDH-203ENST00000396858 ANGEL1Q9UNK9 670 aaKnown RBP16.58■□□□□ 0.24
GAPDH-203ENST00000396858 MPHOSPH10O00566 681 aaKnown RBP16.57■□□□□ 0.24
GAPDH-203ENST00000396858 RRP1BQ14684 758 aaKnown RBP16.57■□□□□ 0.24
GAPDH-203ENST00000396858 WTAPQ15007 396 aa16.57■□□□□ 0.24
GAPDH-203ENST00000396858 ANKRD1Q15327 319 aa16.57■□□□□ 0.24
GAPDH-203ENST00000396858 TATDN1Q6P1N9 297 aa16.57■□□□□ 0.24
GAPDH-203ENST00000396858 IQCA1Q86XH1 822 aa16.57■□□□□ 0.24
GAPDH-203ENST00000396858 RAB11FIP4Q86YS3 637 aa16.57■□□□□ 0.24
GAPDH-203ENST00000396858 ENAHQ8N8S7 591 aaPredicted RBP16.57■□□□□ 0.24
GAPDH-203ENST00000396858 ZSCAN10Q96SZ4 725 aaPredicted RBP16.57■□□□□ 0.24
GAPDH-203ENST00000396858 GLIS2Q9BZE0 524 aaPredicted RBP16.57■□□□□ 0.24
GAPDH-203ENST00000396858 TPCN1Q9ULQ1 816 aa16.57■□□□□ 0.24
GAPDH-203ENST00000396858 PAPPA2Q9BXP8 1791 aa16.56■□□□□ 0.24
GAPDH-203ENST00000396858 KLF18A0A0U1RQI7 1052 aa16.56■□□□□ 0.24
GAPDH-203ENST00000396858 ERICH2A1L162 156 aa16.56■□□□□ 0.24
GAPDH-203ENST00000396858 GOLGA8BA8MQT2 603 aa16.56■□□□□ 0.24
GAPDH-203ENST00000396858 VEGFAP15692 232 aaPredicted RBP16.56■□□□□ 0.24
GAPDH-203ENST00000396858 SLC4A3P48751 1232 aa16.56■□□□□ 0.24
GAPDH-203ENST00000396858 MCM2P49736 904 aa16.56■□□□□ 0.24
GAPDH-203ENST00000396858 NT5C2P49902 561 aa16.56■□□□□ 0.24
GAPDH-203ENST00000396858 SEC23AQ15436 765 aa16.56■□□□□ 0.24
GAPDH-203ENST00000396858 NEDD1Q8NHV4 660 aa16.56■□□□□ 0.24
GAPDH-203ENST00000396858 IGDCC4Q8TDY8 1250 aa16.56■□□□□ 0.24
GAPDH-203ENST00000396858 ZC3H15Q8WU90 426 aaKnown RBP16.56■□□□□ 0.24
GAPDH-203ENST00000396858 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.56■□□□□ 0.24
GAPDH-203ENST00000396858 ALDH8A1Q9H2A2 487 aaPredicted RBP16.56■□□□□ 0.24
GAPDH-203ENST00000396858 TAOK2Q9UL54 1235 aa16.56■□□□□ 0.24
GAPDH-203ENST00000396858 NAP1L2Q9ULW6 460 aaPredicted RBP16.56■□□□□ 0.24
GAPDH-203ENST00000396858 FZD1Q9UP38 647 aa16.56■□□□□ 0.24
GAPDH-203ENST00000396858 CLEC11AQ9Y240 323 aa16.56■□□□□ 0.24
GAPDH-203ENST00000396858 OTOFQ9HC10 1997 aa16.55■□□□□ 0.24
GAPDH-203ENST00000396858 DOCK1Q14185 1865 aa16.55■□□□□ 0.24
GAPDH-203ENST00000396858 ATAD5Q96QE3 1844 aa16.55■□□□□ 0.24
GAPDH-203ENST00000396858 TBC1D12O60347 775 aa16.55■□□□□ 0.24
GAPDH-203ENST00000396858 JAG1P78504 1218 aa16.55■□□□□ 0.24
GAPDH-203ENST00000396858 CERKLQ49MI3 558 aaPredicted RBP16.55■□□□□ 0.24
GAPDH-203ENST00000396858 NFXL1Q6ZNB6 911 aa16.55■□□□□ 0.24
GAPDH-203ENST00000396858 USP48Q86UV5 1035 aa16.55■□□□□ 0.24
GAPDH-203ENST00000396858 CDCA5Q96FF9 252 aa16.55■□□□□ 0.24
GAPDH-203ENST00000396858 TMX3Q96JJ7 454 aa16.55■□□□□ 0.24
GAPDH-203ENST00000396858 MYL10Q9BUA6 226 aa16.55■□□□□ 0.24
GAPDH-203ENST00000396858 IL17RBQ9NRM6 502 aa16.55■□□□□ 0.24
GAPDH-203ENST00000396858 BRPF3Q9ULD4 1205 aa16.55■□□□□ 0.24
GAPDH-203ENST00000396858 LIMCH1Q9UPQ0 1083 aa16.55■□□□□ 0.24
GAPDH-203ENST00000396858 IGKV6D-41A0A0C4DH26 115 aa16.54■□□□□ 0.24
GAPDH-203ENST00000396858 GH2P01242 217 aa16.54■□□□□ 0.24
GAPDH-203ENST00000396858 ST3GAL1Q11201 340 aa16.54■□□□□ 0.24
GAPDH-203ENST00000396858 STK3Q13188 491 aa16.54■□□□□ 0.24
GAPDH-203ENST00000396858 ME3Q16798 604 aa16.54■□□□□ 0.24
GAPDH-203ENST00000396858 ABCB5Q2M3G0 1257 aa16.54■□□□□ 0.24
GAPDH-203ENST00000396858 IFIT1BQ5T764 474 aaKnown RBP16.54■□□□□ 0.24
GAPDH-203ENST00000396858 DCAF15Q66K64 600 aa16.54■□□□□ 0.24
GAPDH-203ENST00000396858 MAP1SQ66K74 1059 aaPredicted RBP16.54■□□□□ 0.24
GAPDH-203ENST00000396858 FBXL16Q8N461 479 aa16.54■□□□□ 0.24
GAPDH-203ENST00000396858 IL27Q8NEV9 243 aa16.54■□□□□ 0.24
GAPDH-203ENST00000396858 CEP95Q96GE4 821 aa16.54■□□□□ 0.24
GAPDH-203ENST00000396858 CCDC17Q96LX7 622 aa16.54■□□□□ 0.24
GAPDH-203ENST00000396858 MTA3Q9BTC8 594 aa16.54■□□□□ 0.24
GAPDH-203ENST00000396858 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.54■□□□□ 0.24
GAPDH-203ENST00000396858 ZBTB21Q9ULJ3 1066 aa16.54■□□□□ 0.24
GAPDH-203ENST00000396858 CCDC69A6NI79 296 aa16.53■□□□□ 0.24
GAPDH-203ENST00000396858 RXRAP19793 462 aa16.53■□□□□ 0.24
GAPDH-203ENST00000396858 LIFRP42702 1097 aa16.53■□□□□ 0.24
GAPDH-203ENST00000396858 PRKG1Q13976 671 aa16.53■□□□□ 0.24
GAPDH-203ENST00000396858 RCSD1Q6JBY9 416 aa16.53■□□□□ 0.24
GAPDH-203ENST00000396858 APOA5Q6Q788 366 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms