RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 RAD9BQ6WBX8 426 aa9.89□□□□□ -0.83
BDNF-204ENST00000395980 TRMT44Q8IYL2 757 aaKnown RBP9.89□□□□□ -0.83
BDNF-204ENST00000395980 IGSF22Q8N9C0 903 aa9.89□□□□□ -0.83
BDNF-204ENST00000395980 RASSF4Q9H2L5 321 aa9.89□□□□□ -0.83
BDNF-204ENST00000395980 ZBTB3Q9H5J0 574 aa9.89□□□□□ -0.83
BDNF-204ENST00000395980 AATFQ9NY61 560 aaKnown RBP eCLIP9.89□□□□□ -0.83
BDNF-204ENST00000395980 ADD3Q9UEY8 706 aaKnown RBP9.89□□□□□ -0.83
BDNF-204ENST00000395980 RXRAP19793 462 aa9.89□□□□□ -0.83
BDNF-204ENST00000395980 PIP4K2BP78356 416 aa9.89□□□□□ -0.83
BDNF-204ENST00000395980 IFIT5Q13325 482 aaKnown RBP9.89□□□□□ -0.83
BDNF-204ENST00000395980 SLC9C2Q5TAH2 1124 aa9.89□□□□□ -0.83
BDNF-204ENST00000395980 LEKR1Q6ZMV7 388 aa9.89□□□□□ -0.83
BDNF-204ENST00000395980 ACBD3Q9H3P7 528 aa9.89□□□□□ -0.83
BDNF-204ENST00000395980 SYNRGQ9UMZ2 1314 aa9.89□□□□□ -0.83
BDNF-204ENST00000395980 BTBD18B2RXH4 712 aa9.89□□□□□ -0.83
BDNF-204ENST00000395980 DEXIO95424 95 aa9.89□□□□□ -0.83
BDNF-204ENST00000395980 LMAN1P49257 510 aa9.89□□□□□ -0.83
BDNF-204ENST00000395980 CUL4BQ13620 913 aa9.89□□□□□ -0.83
BDNF-204ENST00000395980 MTF1Q14872 753 aa9.89□□□□□ -0.83
BDNF-204ENST00000395980 TMTC1Q8IUR5 882 aa9.89□□□□□ -0.83
BDNF-204ENST00000395980 KRT23Q9C075 422 aa9.89□□□□□ -0.83
BDNF-204ENST00000395980 SENP2Q9HC62 589 aa9.89□□□□□ -0.83
BDNF-204ENST00000395980 DENND2AQ9ULE3 1009 aa9.89□□□□□ -0.83
BDNF-204ENST00000395980 CDHR2Q9BYE9 1310 aa9.89□□□□□ -0.83
BDNF-204ENST00000395980 CCDC196A0A1B0GTZ2 297 aa9.88□□□□□ -0.83
BDNF-204ENST00000395980 SH3RF1Q7Z6J0 888 aa9.88□□□□□ -0.83
BDNF-204ENST00000395980 WWC3Q9ULE0 1092 aa9.88□□□□□ -0.83
BDNF-204ENST00000395980 RIPOR2Q9Y4F9 1068 aa9.88□□□□□ -0.83
BDNF-204ENST00000395980 BMP15O95972 392 aa9.88□□□□□ -0.83
BDNF-204ENST00000395980 RBL2Q08999 1139 aa9.88□□□□□ -0.83
BDNF-204ENST00000395980 TRIM14Q14142 442 aa9.88□□□□□ -0.83
BDNF-204ENST00000395980 FAM71BQ8TC56 605 aa9.88□□□□□ -0.83
BDNF-204ENST00000395980 STRBPQ96SI9 672 aaKnown RBP9.88□□□□□ -0.83
BDNF-204ENST00000395980 MYO1CO00159 1063 aa9.88□□□□□ -0.83
BDNF-204ENST00000395980 IFIT3O14879 490 aaKnown RBP9.88□□□□□ -0.83
BDNF-204ENST00000395980 A1BGP04217 495 aa9.88□□□□□ -0.83
BDNF-204ENST00000395980 UQCRFS1P1P0C7P4 283 aa9.88□□□□□ -0.83
BDNF-204ENST00000395980 PDE6AP16499 860 aa9.88□□□□□ -0.83
BDNF-204ENST00000395980 ARID4AP29374 1257 aaPredicted RBP9.88□□□□□ -0.83
BDNF-204ENST00000395980 RTN1Q16799 776 aa9.88□□□□□ -0.83
BDNF-204ENST00000395980 ZNF827Q17R98 1081 aa9.88□□□□□ -0.83
BDNF-204ENST00000395980 KIF4BQ2VIQ3 1234 aa9.88□□□□□ -0.83
BDNF-204ENST00000395980 HSP90AA4PQ58FG1 418 aa9.88□□□□□ -0.83
BDNF-204ENST00000395980 PI16Q6UXB8 463 aa9.88□□□□□ -0.83
BDNF-204ENST00000395980 SRLQ86TD4 932 aa9.88□□□□□ -0.83
BDNF-204ENST00000395980 NKX2-3Q8TAU0 364 aa9.88□□□□□ -0.83
BDNF-204ENST00000395980 GSDMAQ96QA5 445 aa9.88□□□□□ -0.83
BDNF-204ENST00000395980 NAPGQ99747 312 aaPredicted RBP9.88□□□□□ -0.83
BDNF-204ENST00000395980 PDE11AQ9HCR9 933 aa9.88□□□□□ -0.83
BDNF-204ENST00000395980 MED4Q9NPJ6 270 aa9.88□□□□□ -0.83
BDNF-204ENST00000395980 LZTFL1Q9NQ48 299 aa9.88□□□□□ -0.83
BDNF-204ENST00000395980 PCDH11XQ9BZA7 1347 aa9.88□□□□□ -0.83
BDNF-204ENST00000395980 PCDH11YQ9BZA8 1340 aa9.88□□□□□ -0.83
BDNF-204ENST00000395980 COL22A1Q8NFW1 1626 aaPredicted RBP9.87□□□□□ -0.83
BDNF-204ENST00000395980 TCRBV5S4A2TA0A5A2 114 aa9.87□□□□□ -0.83
BDNF-204ENST00000395980 CTAGE15A4D2H0 777 aa9.87□□□□□ -0.83
BDNF-204ENST00000395980 APPP05067 770 aa9.87□□□□□ -0.83
BDNF-204ENST00000395980 CTAGE8P0CG41 777 aa9.87□□□□□ -0.83
BDNF-204ENST00000395980 GRIN1Q05586 938 aa9.87□□□□□ -0.83
BDNF-204ENST00000395980 METTL24Q5JXM2 366 aa9.87□□□□□ -0.83
BDNF-204ENST00000395980 SPECC1Q5M775 1068 aa9.87□□□□□ -0.83
BDNF-204ENST00000395980 ZNF569Q5MCW4 686 aa9.87□□□□□ -0.83
BDNF-204ENST00000395980 CTAGE6Q86UF2 777 aa9.87□□□□□ -0.83
BDNF-204ENST00000395980 CTAGE4Q8IX94 777 aa9.87□□□□□ -0.83
BDNF-204ENST00000395980 TMTC2Q8N394 836 aa9.87□□□□□ -0.83
BDNF-204ENST00000395980 STRN4Q9NRL3 753 aa9.87□□□□□ -0.83
BDNF-204ENST00000395980 ARAP2Q8WZ64 1704 aa9.87□□□□□ -0.83
BDNF-204ENST00000395980 ZNF532Q9HCE3 1301 aa9.87□□□□□ -0.83
BDNF-204ENST00000395980 TEX33O43247 280 aa9.87□□□□□ -0.83
BDNF-204ENST00000395980 SART3Q15020 963 aaKnown RBP9.87□□□□□ -0.83
BDNF-204ENST00000395980 ZBTB38Q8NAP3 1195 aaPredicted RBP9.87□□□□□ -0.83
BDNF-204ENST00000395980 PNKPQ96T60 521 aa9.87□□□□□ -0.83
BDNF-204ENST00000395980 IRX2Q9BZI1 471 aaPredicted RBP9.87□□□□□ -0.83
BDNF-204ENST00000395980 PIH1D3Q9NQM4 214 aaKnown RBP9.87□□□□□ -0.83
BDNF-204ENST00000395980 MKRN1Q9UHC7 482 aaKnown RBP9.87□□□□□ -0.83
BDNF-204ENST00000395980 IQSEC3Q9UPP2 1182 aaPredicted RBP9.87□□□□□ -0.83
BDNF-204ENST00000395980 TNS3Q68CZ2 1445 aa9.87□□□□□ -0.83
BDNF-204ENST00000395980 DOCK2Q92608 1830 aa9.87□□□□□ -0.83
BDNF-204ENST00000395980 PATL2C9JE40 543 aaKnown RBP9.87□□□□□ -0.83
BDNF-204ENST00000395980 SPAG1Q07617 926 aa9.87□□□□□ -0.83
BDNF-204ENST00000395980 PPP2R5BQ15173 497 aa9.87□□□□□ -0.83
BDNF-204ENST00000395980 WDR93Q6P2C0 686 aa9.87□□□□□ -0.83
BDNF-204ENST00000395980 VIPAS39Q9H9C1 493 aa9.87□□□□□ -0.83
BDNF-204ENST00000395980 EFCC1Q9HA90 598 aa9.87□□□□□ -0.83
BDNF-204ENST00000395980 PCDHB6Q9Y5E3 794 aa9.87□□□□□ -0.83
BDNF-204ENST00000395980 AKNAD1Q5T1N1 836 aa9.86□□□□□ -0.83
BDNF-204ENST00000395980 CTR9Q6PD62 1173 aa9.86□□□□□ -0.83
BDNF-204ENST00000395980 FERMT2Q96AC1 680 aa9.86□□□□□ -0.83
BDNF-204ENST00000395980 AIDAQ96BJ3 306 aa9.86□□□□□ -0.83
BDNF-204ENST00000395980 TRIM34Q9BYJ4 488 aa9.86□□□□□ -0.83
BDNF-204ENST00000395980 ABCB6Q9NP58 842 aa9.86□□□□□ -0.83
BDNF-204ENST00000395980 VPS18Q9P253 973 aa9.86□□□□□ -0.83
BDNF-204ENST00000395980 PUF60Q9UHX1 559 aaKnown RBP9.86□□□□□ -0.83
BDNF-204ENST00000395980 MCM3P25205 808 aa9.86□□□□□ -0.83
BDNF-204ENST00000395980 NKX1-1Q15270 411 aaPredicted RBP9.86□□□□□ -0.83
BDNF-204ENST00000395980 HSP90B2PQ58FF3 399 aa9.86□□□□□ -0.83
BDNF-204ENST00000395980 SLC35F6Q8N357 371 aa9.86□□□□□ -0.83
BDNF-204ENST00000395980 CRACR2BQ8N4Y2 399 aaPredicted RBP9.86□□□□□ -0.83
BDNF-204ENST00000395980 VGLL2Q8N8G2 317 aa9.86□□□□□ -0.83
BDNF-204ENST00000395980 CSRNP2Q9H175 543 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms