RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 DEFB129Q9H1M3 183 aa17.7■□□□□ 0.42
SCAF11-204ENST00000395454 MKRN1Q9UHC7 482 aaKnown RBP17.7■□□□□ 0.42
SCAF11-204ENST00000395454 MYH1P12882 1939 aa17.7■□□□□ 0.42
SCAF11-204ENST00000395454 PITPNM2Q9BZ72 1349 aa17.69■□□□□ 0.42
SCAF11-204ENST00000395454 MYH15Q9Y2K3 1946 aa17.69■□□□□ 0.42
SCAF11-204ENST00000395454 ENTPD3O75355 529 aa17.69■□□□□ 0.42
SCAF11-204ENST00000395454 TRDNQ13061 729 aa17.69■□□□□ 0.42
SCAF11-204ENST00000395454 GIMAP6Q6P9H5 292 aa17.69■□□□□ 0.42
SCAF11-204ENST00000395454 FAM83AQ86UY5 434 aa17.69■□□□□ 0.42
SCAF11-204ENST00000395454 SULF1Q8IWU6 871 aa17.69■□□□□ 0.42
SCAF11-204ENST00000395454 LAMB1P07942 1786 aa17.69■□□□□ 0.42
SCAF11-204ENST00000395454 CNTNAP1P78357 1384 aa17.69■□□□□ 0.42
SCAF11-204ENST00000395454 USP17L12C9JPN9 530 aa17.68■□□□□ 0.42
SCAF11-204ENST00000395454 USP17L21D6R901 530 aa17.68■□□□□ 0.42
SCAF11-204ENST00000395454 JAK2O60674 1132 aa17.68■□□□□ 0.42
SCAF11-204ENST00000395454 NPM3O75607 178 aaKnown RBP17.68■□□□□ 0.42
SCAF11-204ENST00000395454 POLR3DP05423 398 aaPredicted RBP17.68■□□□□ 0.42
SCAF11-204ENST00000395454 AMOTL1Q8IY63 956 aa17.68■□□□□ 0.42
SCAF11-204ENST00000395454 STAG1Q8WVM7 1258 aa17.68■□□□□ 0.42
SCAF11-204ENST00000395454 MTA3Q9BTC8 594 aa17.68■□□□□ 0.42
SCAF11-204ENST00000395454 GZF1Q9H116 711 aaPredicted RBP17.68■□□□□ 0.42
SCAF11-204ENST00000395454 ANAPC4Q9UJX5 808 aa17.68■□□□□ 0.42
SCAF11-204ENST00000395454 MAP1SQ66K74 1059 aaPredicted RBP17.68■□□□□ 0.42
SCAF11-204ENST00000395454 CTR9Q6PD62 1173 aa17.68■□□□□ 0.42
SCAF11-204ENST00000395454 KRT26Q7Z3Y9 468 aa17.68■□□□□ 0.42
SCAF11-204ENST00000395454 LDHDQ86WU2 507 aa17.68■□□□□ 0.42
SCAF11-204ENST00000395454 RGS22Q8NE09 1264 aa17.68■□□□□ 0.42
SCAF11-204ENST00000395454 FAM151AQ8WW52 585 aa17.68■□□□□ 0.42
SCAF11-204ENST00000395454 TMEM87BQ96K49 555 aa17.68■□□□□ 0.42
SCAF11-204ENST00000395454 CNNM2Q9H8M5 875 aa17.68■□□□□ 0.42
SCAF11-204ENST00000395454 ARPP21Q9UBL0 812 aaPredicted RBP17.68■□□□□ 0.42
SCAF11-204ENST00000395454 PGAP2Q9UHJ9 254 aa17.68■□□□□ 0.42
SCAF11-204ENST00000395454 NEDD4P46934 1319 aa17.67■□□□□ 0.42
SCAF11-204ENST00000395454 DDTLA6NHG4 134 aaPredicted RBP17.67■□□□□ 0.42
SCAF11-204ENST00000395454 MINDY4BA8MYZ0 360 aa17.67■□□□□ 0.42
SCAF11-204ENST00000395454 CDC37L1Q7L3B6 337 aa17.67■□□□□ 0.42
SCAF11-204ENST00000395454 CHST3Q7LGC8 479 aa17.67■□□□□ 0.42
SCAF11-204ENST00000395454 ANGEL1Q9UNK9 670 aaKnown RBP17.67■□□□□ 0.42
SCAF11-204ENST00000395454 HPS5Q9UPZ3 1129 aa17.67■□□□□ 0.42
SCAF11-204ENST00000395454 NID2Q14112 1375 aa17.67■□□□□ 0.42
SCAF11-204ENST00000395454 CYP2D7A0A087X1C5 515 aa17.66■□□□□ 0.42
SCAF11-204ENST00000395454 ADM5C9JUS6 153 aa17.66■□□□□ 0.42
SCAF11-204ENST00000395454 SH2B2O14492 632 aaPredicted RBP17.66■□□□□ 0.42
SCAF11-204ENST00000395454 ZNF445P59923 1031 aa17.66■□□□□ 0.42
SCAF11-204ENST00000395454 AKNAD1Q5T1N1 836 aa17.66■□□□□ 0.42
SCAF11-204ENST00000395454 PRAMEF18Q5VWM3 479 aa17.66■□□□□ 0.42
SCAF11-204ENST00000395454 SGMS1Q86VZ5 419 aa17.66■□□□□ 0.42
SCAF11-204ENST00000395454 CSRNP1Q96S65 589 aa17.66■□□□□ 0.42
SCAF11-204ENST00000395454 DHX36Q9H2U1 1008 aaKnown RBP17.66■□□□□ 0.42
SCAF11-204ENST00000395454 BRPF3Q9ULD4 1205 aa17.66■□□□□ 0.42
SCAF11-204ENST00000395454 DDX60LQ5H9U9 1706 aaKnown RBP17.66■□□□□ 0.42
SCAF11-204ENST00000395454 PTPDC1A2A3K4 754 aa17.66■□□□□ 0.42
SCAF11-204ENST00000395454 CYP2D6P10635 497 aa17.66■□□□□ 0.42
SCAF11-204ENST00000395454 PLCD1P51178 756 aa17.66■□□□□ 0.42
SCAF11-204ENST00000395454 L1TD1Q5T7N2 865 aaKnown RBP17.66■□□□□ 0.42
SCAF11-204ENST00000395454 CYB5R4Q7L1T6 521 aa17.66■□□□□ 0.42
SCAF11-204ENST00000395454 SH3BP5LQ7L8J4 393 aa17.66■□□□□ 0.42
SCAF11-204ENST00000395454 CDAN1Q8IWY9 1227 aa17.66■□□□□ 0.42
SCAF11-204ENST00000395454 ZNF784Q8NCA9 323 aaPredicted RBP17.66■□□□□ 0.42
SCAF11-204ENST00000395454 NKX2-3Q8TAU0 364 aa17.66■□□□□ 0.42
SCAF11-204ENST00000395454 GPHNQ9NQX3 736 aaPredicted RBP17.66■□□□□ 0.42
SCAF11-204ENST00000395454 KIF3AQ9Y496 699 aa17.66■□□□□ 0.42
SCAF11-204ENST00000395454 VPS37CA5D8V6 355 aaPredicted RBP17.65■□□□□ 0.42
SCAF11-204ENST00000395454 HLA-DOAP06340 250 aa17.65■□□□□ 0.42
SCAF11-204ENST00000395454 EVX2Q03828 476 aa17.65■□□□□ 0.42
SCAF11-204ENST00000395454 USP48Q86UV5 1035 aa17.65■□□□□ 0.42
SCAF11-204ENST00000395454 STK11IPQ8N1F8 1099 aa17.65■□□□□ 0.42
SCAF11-204ENST00000395454 GLIS2Q9BZE0 524 aaPredicted RBP17.65■□□□□ 0.42
SCAF11-204ENST00000395454 KRT23Q9C075 422 aa17.65■□□□□ 0.42
SCAF11-204ENST00000395454 TACC3Q9Y6A5 838 aa17.65■□□□□ 0.42
SCAF11-204ENST00000395454 ATRNL1Q5VV63 1379 aa17.65■□□□□ 0.42
SCAF11-204ENST00000395454 GOLGA6L3A6NEY3 463 aa17.64■□□□□ 0.42
SCAF11-204ENST00000395454 SMIM22K7EJ46 135 aa17.64■□□□□ 0.42
SCAF11-204ENST00000395454 KIF3CO14782 793 aa17.64■□□□□ 0.42
SCAF11-204ENST00000395454 LIFRP42702 1097 aa17.64■□□□□ 0.42
SCAF11-204ENST00000395454 DLK2Q6UY11 383 aa17.64■□□□□ 0.42
SCAF11-204ENST00000395454 TTC6Q86TZ1 520 aa17.64■□□□□ 0.42
SCAF11-204ENST00000395454 IGDCC4Q8TDY8 1250 aa17.64■□□□□ 0.42
SCAF11-204ENST00000395454 PI4KBQ9UBF8 816 aa17.64■□□□□ 0.42
SCAF11-204ENST00000395454 KLF18A0A0U1RQI7 1052 aa17.64■□□□□ 0.41
SCAF11-204ENST00000395454 DHX16O60231 1041 aaKnown RBP17.64■□□□□ 0.41
SCAF11-204ENST00000395454 FGRP09769 529 aa17.64■□□□□ 0.41
SCAF11-204ENST00000395454 PCP11498 1178 aaKnown RBP17.64■□□□□ 0.41
SCAF11-204ENST00000395454 PPARAQ07869 468 aa17.64■□□□□ 0.41
SCAF11-204ENST00000395454 CSPP1Q1MSJ5 1256 aa17.64■□□□□ 0.41
SCAF11-204ENST00000395454 SBK1Q52WX2 424 aa17.64■□□□□ 0.41
SCAF11-204ENST00000395454 C12orf60Q5U649 245 aa17.64■□□□□ 0.41
SCAF11-204ENST00000395454 TEPSINQ96N21 525 aa17.64■□□□□ 0.41
SCAF11-204ENST00000395454 RNF41Q9H4P4 317 aaPredicted RBP17.64■□□□□ 0.41
SCAF11-204ENST00000395454 CNPY2Q9Y2B0 182 aa17.64■□□□□ 0.41
SCAF11-204ENST00000395454 PPP2R3BQ9Y5P8 575 aa17.64■□□□□ 0.41
SCAF11-204ENST00000395454 ELP1O95163 1332 aa17.64■□□□□ 0.41
SCAF11-204ENST00000395454 B4E1Z4 1266 aa17.63■□□□□ 0.41
SCAF11-204ENST00000395454 SERPINB13Q9UIV8 391 aa17.63■□□□□ 0.41
SCAF11-204ENST00000395454 COL2A1P02458 1487 aaPredicted RBP17.63■□□□□ 0.41
SCAF11-204ENST00000395454 DTNBO60941 627 aa17.62■□□□□ 0.41
SCAF11-204ENST00000395454 DNM1Q05193 864 aaKnown RBP17.62■□□□□ 0.41
SCAF11-204ENST00000395454 CTDSPL2Q05D32 466 aa17.62■□□□□ 0.41
SCAF11-204ENST00000395454 RESTQ13127 1097 aa17.62■□□□□ 0.41
SCAF11-204ENST00000395454 NBPF12Q5TAG4 269 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms