RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 TBC1D16Q8TBP0 767 aa13.72□□□□□ -0.21
RTN1-203ENST00000395090 VRTNQ9H8Y1 702 aa13.72□□□□□ -0.21
RTN1-203ENST00000395090 POLLQ9UGP5 575 aa13.72□□□□□ -0.21
RTN1-203ENST00000395090 RNF113AO15541 343 aaKnown RBP13.71□□□□□ -0.22
RTN1-203ENST00000395090 ZFYP08048 801 aaPredicted RBP13.71□□□□□ -0.22
RTN1-203ENST00000395090 NMIQ13287 307 aaPredicted RBP13.71□□□□□ -0.22
RTN1-203ENST00000395090 NCOA4Q13772 614 aa13.71□□□□□ -0.22
RTN1-203ENST00000395090 PRPF40BQ6NWY9 871 aaKnown RBP13.71□□□□□ -0.22
RTN1-203ENST00000395090 VASH1Q7L8A9 365 aaPredicted RBP13.71□□□□□ -0.22
RTN1-203ENST00000395090 VPS37DQ86XT2 251 aa13.71□□□□□ -0.22
RTN1-203ENST00000395090 RETREG2Q8NC44 543 aa13.71□□□□□ -0.22
RTN1-203ENST00000395090 FAM227BQ96M60 508 aa13.71□□□□□ -0.22
RTN1-203ENST00000395090 KCTD15Q96SI1 283 aaPredicted RBP13.71□□□□□ -0.22
RTN1-203ENST00000395090 DENND2AQ9ULE3 1009 aa13.71□□□□□ -0.22
RTN1-203ENST00000395090 RAD50Q92878 1312 aa13.7□□□□□ -0.22
RTN1-203ENST00000395090 UFL1O94874 794 aa13.7□□□□□ -0.22
RTN1-203ENST00000395090 ZMYM1Q5SVZ6 1142 aa13.7□□□□□ -0.22
RTN1-203ENST00000395090 CC2D2BQ6DHV5 1058 aa13.7□□□□□ -0.22
RTN1-203ENST00000395090 MPNDQ8N594 471 aa13.7□□□□□ -0.22
RTN1-203ENST00000395090 TDRD7Q8NHU6 1098 aaKnown RBP13.7□□□□□ -0.22
RTN1-203ENST00000395090 PIH1D3Q9NQM4 214 aaKnown RBP13.7□□□□□ -0.22
RTN1-203ENST00000395090 DOLKQ9UPQ8 538 aa13.7□□□□□ -0.22
RTN1-203ENST00000395090 LTBP1Q14766 1721 aa13.7□□□□□ -0.22
RTN1-203ENST00000395090 KIF13BQ9NQT8 1826 aa13.69□□□□□ -0.22
RTN1-203ENST00000395090 A0A0D9SFI3 127 aa13.69□□□□□ -0.22
RTN1-203ENST00000395090 TRAF7Q6Q0C0 670 aa13.69□□□□□ -0.22
RTN1-203ENST00000395090 TMX4Q9H1E5 349 aaPredicted RBP13.69□□□□□ -0.22
RTN1-203ENST00000395090 HELLSQ9NRZ9 838 aa13.69□□□□□ -0.22
RTN1-203ENST00000395090 CHGBP05060 677 aa13.68□□□□□ -0.22
RTN1-203ENST00000395090 PDIA4P13667 645 aaKnown RBP13.68□□□□□ -0.22
RTN1-203ENST00000395090 IL1R1P14778 569 aa13.68□□□□□ -0.22
RTN1-203ENST00000395090 DPEP1P16444 411 aa13.68□□□□□ -0.22
RTN1-203ENST00000395090 ARID5BQ14865 1188 aa13.68□□□□□ -0.22
RTN1-203ENST00000395090 TSGA10IPQ3SY00 556 aa13.68□□□□□ -0.22
RTN1-203ENST00000395090 MCMDC2Q4G0Z9 681 aa13.68□□□□□ -0.22
RTN1-203ENST00000395090 SPRYD7Q5W111 196 aa13.68□□□□□ -0.22
RTN1-203ENST00000395090 OLFM4Q6UX06 510 aa13.68□□□□□ -0.22
RTN1-203ENST00000395090 ZNF804AQ7Z570 1209 aa13.68□□□□□ -0.22
RTN1-203ENST00000395090 TTLL6Q8N841 843 aa13.68□□□□□ -0.22
RTN1-203ENST00000395090 RTFDC1Q9BY42 306 aaPredicted RBP13.68□□□□□ -0.22
RTN1-203ENST00000395090 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.68□□□□□ -0.22
RTN1-203ENST00000395090 LSG1Q9H089 658 aaKnown RBP13.68□□□□□ -0.22
RTN1-203ENST00000395090 MED23Q9ULK4 1368 aa13.68□□□□□ -0.22
RTN1-203ENST00000395090 SLX4Q8IY92 1834 aa13.68□□□□□ -0.22
RTN1-203ENST00000395090 A0A0G2JLW4 131 aa13.68□□□□□ -0.22
RTN1-203ENST00000395090 WNT7AO00755 349 aa13.68□□□□□ -0.22
RTN1-203ENST00000395090 IGSF3O75054 1194 aa13.68□□□□□ -0.22
RTN1-203ENST00000395090 UBE3CQ15386 1083 aa13.68□□□□□ -0.22
RTN1-203ENST00000395090 EML3Q32P44 896 aa13.68□□□□□ -0.22
RTN1-203ENST00000395090 ZSCAN25Q6NSZ9 544 aa13.68□□□□□ -0.22
RTN1-203ENST00000395090 DPP8Q6V1X1 898 aaPredicted RBP13.68□□□□□ -0.22
RTN1-203ENST00000395090 KIAA1211Q6ZU35 1233 aa13.68□□□□□ -0.22
RTN1-203ENST00000395090 KIF2CQ99661 725 aa13.68□□□□□ -0.22
RTN1-203ENST00000395090 ANO2Q9NQ90 1003 aa13.68□□□□□ -0.22
RTN1-203ENST00000395090 CD2APQ9Y5K6 639 aa13.68□□□□□ -0.22
RTN1-203ENST00000395090 ATG7O95352 703 aa13.67□□□□□ -0.22
RTN1-203ENST00000395090 ADD2P35612 726 aa13.67□□□□□ -0.22
RTN1-203ENST00000395090 MAP3K12Q12852 859 aa13.67□□□□□ -0.22
RTN1-203ENST00000395090 SLC9C2Q5TAH2 1124 aa13.67□□□□□ -0.22
RTN1-203ENST00000395090 MAP4K1Q92918 833 aa13.67□□□□□ -0.22
RTN1-203ENST00000395090 IL17RAQ96F46 866 aa13.67□□□□□ -0.22
RTN1-203ENST00000395090 CDK15Q96Q40 435 aa13.67□□□□□ -0.22
RTN1-203ENST00000395090 MKRN1Q9UHC7 482 aaKnown RBP13.67□□□□□ -0.22
RTN1-203ENST00000395090 IQSEC3Q9UPP2 1182 aaPredicted RBP13.67□□□□□ -0.22
RTN1-203ENST00000395090 COL1A1P02452 1464 aaPredicted RBP13.67□□□□□ -0.22
RTN1-203ENST00000395090 SNED1Q8TER0 1413 aa13.66□□□□□ -0.22
RTN1-203ENST00000395090 TCRBV5S4A2TA0A5A2 114 aa13.66□□□□□ -0.22
RTN1-203ENST00000395090 ZNF589Q86UQ0 364 aaPredicted RBP13.66□□□□□ -0.22
RTN1-203ENST00000395090 APPBP2Q92624 585 aa13.66□□□□□ -0.22
RTN1-203ENST00000395090 OSBP2Q969R2 916 aa13.66□□□□□ -0.22
RTN1-203ENST00000395090 GPR101Q96P66 508 aaPredicted RBP13.66□□□□□ -0.22
RTN1-203ENST00000395090 SEC62Q99442 399 aaKnown RBP13.66□□□□□ -0.22
RTN1-203ENST00000395090 ZC3H12CQ9C0D7 883 aaKnown RBP13.66□□□□□ -0.22
RTN1-203ENST00000395090 CD209Q9NNX6 404 aa13.66□□□□□ -0.22
RTN1-203ENST00000395090 SALL1Q9NSC2 1324 aa13.66□□□□□ -0.22
RTN1-203ENST00000395090 DUOX1Q9NRD9 1551 aa13.66□□□□□ -0.22
RTN1-203ENST00000395090 DLEC1Q9Y238 1755 aa13.66□□□□□ -0.22
RTN1-203ENST00000395090 IDH1O75874 414 aaKnown RBP13.65□□□□□ -0.22
RTN1-203ENST00000395090 PDE6AP16499 860 aa13.65□□□□□ -0.22
RTN1-203ENST00000395090 HSPA4P34932 840 aa13.65□□□□□ -0.22
RTN1-203ENST00000395090 ANP32AP39687 249 aaKnown RBP13.65□□□□□ -0.22
RTN1-203ENST00000395090 RAB15P59190 212 aa13.65□□□□□ -0.22
RTN1-203ENST00000395090 PTH1RQ03431 593 aa13.65□□□□□ -0.22
RTN1-203ENST00000395090 TMED8Q6PL24 325 aaPredicted RBP13.65□□□□□ -0.22
RTN1-203ENST00000395090 TLL2Q9Y6L7 1015 aa13.65□□□□□ -0.22
RTN1-203ENST00000395090 SIAH2O43255 324 aa13.64□□□□□ -0.23
RTN1-203ENST00000395090 FRAT2O75474 233 aaPredicted RBP13.64□□□□□ -0.23
RTN1-203ENST00000395090 OXLD1Q5BKU9 147 aa13.64□□□□□ -0.23
RTN1-203ENST00000395090 WDR66Q8TBY9 1149 aa13.64□□□□□ -0.23
RTN1-203ENST00000395090 KCNB2Q92953 911 aa13.64□□□□□ -0.23
RTN1-203ENST00000395090 MRGPRX2Q96LB1 330 aa13.64□□□□□ -0.23
RTN1-203ENST00000395090 EYA3Q99504 573 aa13.64□□□□□ -0.23
RTN1-203ENST00000395090 COA1Q9GZY4 146 aa13.64□□□□□ -0.23
RTN1-203ENST00000395090 PIM2Q9P1W9 311 aa13.64□□□□□ -0.23
RTN1-203ENST00000395090 LRP2BPQ9P2M1 347 aa13.64□□□□□ -0.23
RTN1-203ENST00000395090 WWC3Q9ULE0 1092 aa13.64□□□□□ -0.23
RTN1-203ENST00000395090 PCDHB11Q9Y5F2 797 aa13.64□□□□□ -0.23
RTN1-203ENST00000395090 CCDC171Q6TFL3 1326 aa13.64□□□□□ -0.23
RTN1-203ENST00000395090 ANAPC15P60006 121 aa13.64□□□□□ -0.23
RTN1-203ENST00000395090 NECTIN1Q15223 517 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms