RNA–Protein interactions for RNA: ENST00000394990.8

SMIM29-202, Transcript of small integral membrane protein 29, humanhuman

TSL 1 (best) BASIC

Gene SMIM29, Length 792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM29-202ENST00000394990 DDX4Q9NQI0 724 aaKnown RBP16.91■□□□□ 0.3
SMIM29-202ENST00000394990 SH3D19Q5HYK7 790 aa16.9■□□□□ 0.3
SMIM29-202ENST00000394990 ZSCAN29Q8IWY8 852 aaPredicted RBP16.9■□□□□ 0.3
SMIM29-202ENST00000394990 ASB2Q96Q27 587 aa16.9■□□□□ 0.3
SMIM29-202ENST00000394990 TNNQ9UQP3 1299 aa16.9■□□□□ 0.3
SMIM29-202ENST00000394990 ATP11BQ9Y2G3 1177 aa16.9■□□□□ 0.3
SMIM29-202ENST00000394990 PIEZO1Q92508 2521 aa16.89■□□□□ 0.29
SMIM29-202ENST00000394990 DNM1LO00429 736 aa16.89■□□□□ 0.29
SMIM29-202ENST00000394990 RGS2P41220 211 aa16.89■□□□□ 0.29
SMIM29-202ENST00000394990 LPAR1Q92633 364 aa16.89■□□□□ 0.29
SMIM29-202ENST00000394990 UHRF1Q96T88 793 aaPredicted RBP16.89■□□□□ 0.29
SMIM29-202ENST00000394990 P2RX7Q99572 595 aaKnown RBP16.89■□□□□ 0.29
SMIM29-202ENST00000394990 APBA2Q99767 749 aa16.89■□□□□ 0.29
SMIM29-202ENST00000394990 PORCNQ9H237 461 aa16.89■□□□□ 0.29
SMIM29-202ENST00000394990 C9orf78Q9NZ63 289 aaPredicted RBP16.89■□□□□ 0.29
SMIM29-202ENST00000394990 RBM19Q9Y4C8 960 aaKnown RBP16.89■□□□□ 0.29
SMIM29-202ENST00000394990 TBC1D12O60347 775 aa16.88■□□□□ 0.29
SMIM29-202ENST00000394990 MAPK4P31152 587 aa16.88■□□□□ 0.29
SMIM29-202ENST00000394990 PUM3Q15397 648 aaKnown RBP16.88■□□□□ 0.29
SMIM29-202ENST00000394990 Q3C1V9 767 aa16.88■□□□□ 0.29
SMIM29-202ENST00000394990 GPR142Q7Z601 462 aa16.88■□□□□ 0.29
SMIM29-202ENST00000394990 GPRC5AQ8NFJ5 357 aa16.88■□□□□ 0.29
SMIM29-202ENST00000394990 PRDM5Q9NQX1 630 aaPredicted RBP16.88■□□□□ 0.29
SMIM29-202ENST00000394990 DDX20Q9UHI6 824 aaKnown RBP16.88■□□□□ 0.29
SMIM29-202ENST00000394990 ARIH1Q9Y4X5 557 aaPredicted RBP16.88■□□□□ 0.29
SMIM29-202ENST00000394990 GAKO14976 1311 aa16.88■□□□□ 0.29
SMIM29-202ENST00000394990 TRIM43BA6NCK2 446 aa16.87■□□□□ 0.29
SMIM29-202ENST00000394990 FAM196BA6NMK8 535 aa16.87■□□□□ 0.29
SMIM29-202ENST00000394990 LDHBP07195 334 aaKnown RBP16.87■□□□□ 0.29
SMIM29-202ENST00000394990 IFIT1P09914 478 aaKnown RBP16.87■□□□□ 0.29
SMIM29-202ENST00000394990 HDAC1Q13547 482 aaPredicted RBP16.87■□□□□ 0.29
SMIM29-202ENST00000394990 RRP1BQ14684 758 aaKnown RBP16.87■□□□□ 0.29
SMIM29-202ENST00000394990 RABL6Q3YEC7 729 aaPredicted RBP16.87■□□□□ 0.29
SMIM29-202ENST00000394990 POTEEQ6S8J3 1075 aa16.87■□□□□ 0.29
SMIM29-202ENST00000394990 SH3RF1Q7Z6J0 888 aa16.87■□□□□ 0.29
SMIM29-202ENST00000394990 TRIM43Q96BQ3 446 aaPredicted RBP16.87■□□□□ 0.29
SMIM29-202ENST00000394990 OSBPL5Q9H0X9 879 aaPredicted RBP16.87■□□□□ 0.29
SMIM29-202ENST00000394990 PDLIM7Q9NR12 457 aa16.87■□□□□ 0.29
SMIM29-202ENST00000394990 ZBTB40Q9NUA8 1239 aa16.87■□□□□ 0.29
SMIM29-202ENST00000394990 FLRT1Q9NZU1 646 aa16.87■□□□□ 0.29
SMIM29-202ENST00000394990 RBPJLQ9UBG7 517 aa16.87■□□□□ 0.29
SMIM29-202ENST00000394990 RLFQ13129 1914 aa16.87■□□□□ 0.29
SMIM29-202ENST00000394990 MYH13Q9UKX3 1938 aa16.86■□□□□ 0.29
SMIM29-202ENST00000394990 HOXA7P31268 230 aaPredicted RBP16.86■□□□□ 0.29
SMIM29-202ENST00000394990 EPHB4P54760 987 aa16.86■□□□□ 0.29
SMIM29-202ENST00000394990 HERVK_113P62684 666 aa16.86■□□□□ 0.29
SMIM29-202ENST00000394990 SNX17Q15036 470 aa16.86■□□□□ 0.29
SMIM29-202ENST00000394990 SLC39A5Q6ZMH5 540 aa16.86■□□□□ 0.29
SMIM29-202ENST00000394990 KLHDC4Q8TBB5 520 aa16.86■□□□□ 0.29
SMIM29-202ENST00000394990 TBC1D2Q9BYX2 928 aa16.86■□□□□ 0.29
SMIM29-202ENST00000394990 BICC1Q9H694 974 aaKnown RBP16.86■□□□□ 0.29
SMIM29-202ENST00000394990 THEGQ9P2T0 379 aa16.86■□□□□ 0.29
SMIM29-202ENST00000394990 SALL1Q9NSC2 1324 aa16.86■□□□□ 0.29
SMIM29-202ENST00000394990 CHD9Q3L8U1 2897 aa16.86■□□□□ 0.29
SMIM29-202ENST00000394990 NBPF7P0C2Y1 421 aaPredicted RBP16.85■□□□□ 0.29
SMIM29-202ENST00000394990 DNAJB2P25686 324 aa16.85■□□□□ 0.29
SMIM29-202ENST00000394990 ITGB8P26012 769 aa16.85■□□□□ 0.29
SMIM29-202ENST00000394990 ERVK-9P63128 1117 aa16.85■□□□□ 0.29
SMIM29-202ENST00000394990 ERVK-24P63145 666 aa16.85■□□□□ 0.29
SMIM29-202ENST00000394990 IRX3P78415 501 aaPredicted RBP16.85■□□□□ 0.29
SMIM29-202ENST00000394990 PICALMQ13492 652 aa16.85■□□□□ 0.29
SMIM29-202ENST00000394990 TRIM60Q495X7 471 aa16.85■□□□□ 0.29
SMIM29-202ENST00000394990 PLEKHH3Q7Z736 793 aa16.85■□□□□ 0.29
SMIM29-202ENST00000394990 RNPC3Q96LT9 517 aaKnown RBP16.85■□□□□ 0.29
SMIM29-202ENST00000394990 ZNF576Q9H609 170 aa16.85■□□□□ 0.29
SMIM29-202ENST00000394990 PCDHB15Q9Y5E8 787 aa16.85■□□□□ 0.29
SMIM29-202ENST00000394990 REV3LO60673 3130 aa16.84■□□□□ 0.29
SMIM29-202ENST00000394990 MSCO60682 206 aa16.84■□□□□ 0.29
SMIM29-202ENST00000394990 ALDH1L1O75891 902 aa16.84■□□□□ 0.29
SMIM29-202ENST00000394990 MRPS5P82675 430 aaKnown RBP16.84■□□□□ 0.29
SMIM29-202ENST00000394990 GJC2Q5T442 439 aaPredicted RBP16.84■□□□□ 0.29
SMIM29-202ENST00000394990 ANKRD44Q8N8A2 993 aa16.84■□□□□ 0.29
SMIM29-202ENST00000394990 PPM1EQ8WY54 764 aa16.84■□□□□ 0.29
SMIM29-202ENST00000394990 C1QTNF1Q9BXJ1 281 aa16.84■□□□□ 0.29
SMIM29-202ENST00000394990 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.84■□□□□ 0.29
SMIM29-202ENST00000394990 USP17L5A8MUK1 530 aa16.83■□□□□ 0.28
SMIM29-202ENST00000394990 UTYO14607 1347 aa16.83■□□□□ 0.28
SMIM29-202ENST00000394990 IGHDP01880 384 aa16.83■□□□□ 0.28
SMIM29-202ENST00000394990 CAP2P40123 477 aa16.83■□□□□ 0.28
SMIM29-202ENST00000394990 MAP2K5Q13163 448 aa16.83■□□□□ 0.28
SMIM29-202ENST00000394990 AKNAD1Q5T1N1 836 aa16.83■□□□□ 0.28
SMIM29-202ENST00000394990 MFSD14CQ5VZR4 134 aa16.83■□□□□ 0.28
SMIM29-202ENST00000394990 TRPV1Q8NER1 839 aa16.83■□□□□ 0.28
SMIM29-202ENST00000394990 LPIN2Q92539 896 aa16.83■□□□□ 0.28
SMIM29-202ENST00000394990 NECAB3Q96P71 396 aaPredicted RBP16.83■□□□□ 0.28
SMIM29-202ENST00000394990 IGHA2P01877 340 aa16.82■□□□□ 0.28
SMIM29-202ENST00000394990 SLC5A1P13866 664 aa16.82■□□□□ 0.28
SMIM29-202ENST00000394990 CNGA1P29973 690 aa16.82■□□□□ 0.28
SMIM29-202ENST00000394990 BACE1P56817 501 aa16.82■□□□□ 0.28
SMIM29-202ENST00000394990 MTMR2Q13614 643 aa16.82■□□□□ 0.28
SMIM29-202ENST00000394990 EDC3Q96F86 508 aaKnown RBP16.82■□□□□ 0.28
SMIM29-202ENST00000394990 MYH2Q9UKX2 1941 aa16.82■□□□□ 0.28
SMIM29-202ENST00000394990 ATAD5Q96QE3 1844 aa16.82■□□□□ 0.28
SMIM29-202ENST00000394990 RHBDL3P58872 404 aa16.81■□□□□ 0.28
SMIM29-202ENST00000394990 WDR18Q9BV38 432 aa16.81■□□□□ 0.28
SMIM29-202ENST00000394990 SRCIN1Q9C0H9 1055 aa16.81■□□□□ 0.28
SMIM29-202ENST00000394990 CHD7Q9P2D1 2997 aa16.81■□□□□ 0.28
SMIM29-202ENST00000394990 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.8■□□□□ 0.28
SMIM29-202ENST00000394990 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.8■□□□□ 0.28
SMIM29-202ENST00000394990 CYP2C19P33261 490 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms