RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 ZMYM1Q5SVZ6 1142 aa16.16■□□□□ 0.18
PPARGC1B-203ENST00000394320 FANCBQ8NB91 859 aa16.16■□□□□ 0.18
PPARGC1B-203ENST00000394320 GOLGA1Q92805 767 aa16.16■□□□□ 0.18
PPARGC1B-203ENST00000394320 PHKBQ93100 1093 aa16.16■□□□□ 0.18
PPARGC1B-203ENST00000394320 LMAN1P49257 510 aa16.15■□□□□ 0.18
PPARGC1B-203ENST00000394320 BCAMP50895 628 aa16.15■□□□□ 0.18
PPARGC1B-203ENST00000394320 CCDC24Q8N4L8 307 aa16.15■□□□□ 0.18
PPARGC1B-203ENST00000394320 CSGALNACT2Q8N6G5 542 aa16.15■□□□□ 0.18
PPARGC1B-203ENST00000394320 BCCIPQ9P287 314 aaKnown RBP eCLIP16.15■□□□□ 0.18
PPARGC1B-203ENST00000394320 RNF17Q9BXT8 1623 aaKnown RBP16.15■□□□□ 0.18
PPARGC1B-203ENST00000394320 ERCC6L2Q5T890 1561 aa16.15■□□□□ 0.18
PPARGC1B-203ENST00000394320 SYNRGQ9UMZ2 1314 aa16.15■□□□□ 0.18
PPARGC1B-203ENST00000394320 STRN3Q13033 797 aa16.15■□□□□ 0.18
PPARGC1B-203ENST00000394320 IWS1Q96ST2 819 aa16.15■□□□□ 0.18
PPARGC1B-203ENST00000394320 BAG1Q99933 345 aaPredicted RBP16.15■□□□□ 0.18
PPARGC1B-203ENST00000394320 IMPACTQ9P2X3 320 aa16.15■□□□□ 0.18
PPARGC1B-203ENST00000394320 CC2D2BQ6DHV5 1058 aa16.15■□□□□ 0.18
PPARGC1B-203ENST00000394320 MAP4K1Q92918 833 aa16.15■□□□□ 0.18
PPARGC1B-203ENST00000394320 ADALQ6DHV7 355 aa16.15■□□□□ 0.18
PPARGC1B-203ENST00000394320 UNC5CLQ8IV45 518 aa16.15■□□□□ 0.18
PPARGC1B-203ENST00000394320 STAMBPO95630 424 aa16.14■□□□□ 0.17
PPARGC1B-203ENST00000394320 PROSER3Q2NL68 480 aa16.14■□□□□ 0.17
PPARGC1B-203ENST00000394320 CLEC4GQ6UXB4 293 aa16.14■□□□□ 0.17
PPARGC1B-203ENST00000394320 MYL10Q9BUA6 226 aa16.14■□□□□ 0.17
PPARGC1B-203ENST00000394320 CTNND2Q9UQB3 1225 aa16.14■□□□□ 0.17
PPARGC1B-203ENST00000394320 CLTCL1P53675 1640 aa16.14■□□□□ 0.17
PPARGC1B-203ENST00000394320 ME3Q16798 604 aa16.14■□□□□ 0.17
PPARGC1B-203ENST00000394320 DCAF17Q5H9S7 520 aaPredicted RBP16.14■□□□□ 0.17
PPARGC1B-203ENST00000394320 SPECC1LQ69YQ0 1117 aa16.14■□□□□ 0.17
PPARGC1B-203ENST00000394320 NLRX1Q86UT6 975 aa16.14■□□□□ 0.17
PPARGC1B-203ENST00000394320 SREK1Q8WXA9 508 aaKnown RBP16.14■□□□□ 0.17
PPARGC1B-203ENST00000394320 EDC3Q96F86 508 aaKnown RBP16.14■□□□□ 0.17
PPARGC1B-203ENST00000394320 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.14■□□□□ 0.17
PPARGC1B-203ENST00000394320 NOP56O00567 594 aaKnown RBP16.14■□□□□ 0.17
PPARGC1B-203ENST00000394320 FGAP02671 866 aa16.14■□□□□ 0.17
PPARGC1B-203ENST00000394320 ARID5AQ03989 594 aa16.14■□□□□ 0.17
PPARGC1B-203ENST00000394320 TCP10Q12799 353 aa16.14■□□□□ 0.17
PPARGC1B-203ENST00000394320 CABP7Q86V35 215 aa16.14■□□□□ 0.17
PPARGC1B-203ENST00000394320 INCENPQ9NQS7 918 aa16.14■□□□□ 0.17
PPARGC1B-203ENST00000394320 HOMER2Q9NSB8 354 aa16.14■□□□□ 0.17
PPARGC1B-203ENST00000394320 DBNLQ9UJU6 430 aaKnown RBP16.14■□□□□ 0.17
PPARGC1B-203ENST00000394320 MTUS1Q9ULD2 1270 aa16.14■□□□□ 0.17
PPARGC1B-203ENST00000394320 WWC3Q9ULE0 1092 aa16.14■□□□□ 0.17
PPARGC1B-203ENST00000394320 RGS12O14924 1447 aa16.14■□□□□ 0.17
PPARGC1B-203ENST00000394320 TNKSO95271 1327 aa16.14■□□□□ 0.17
PPARGC1B-203ENST00000394320 SNX16P57768 344 aa16.14■□□□□ 0.17
PPARGC1B-203ENST00000394320 POSTNQ15063 836 aa16.14■□□□□ 0.17
PPARGC1B-203ENST00000394320 NCAPH2Q6IBW4 605 aa16.14■□□□□ 0.17
PPARGC1B-203ENST00000394320 CCDC84Q86UT8 332 aaPredicted RBP16.14■□□□□ 0.17
PPARGC1B-203ENST00000394320 PNMA1Q8ND90 353 aa16.14■□□□□ 0.17
PPARGC1B-203ENST00000394320 AZI2Q9H6S1 392 aa16.14■□□□□ 0.17
PPARGC1B-203ENST00000394320 SWAP70Q9UH65 585 aa16.14■□□□□ 0.17
PPARGC1B-203ENST00000394320 TNNC1P63316 161 aa16.13■□□□□ 0.17
PPARGC1B-203ENST00000394320 CDC37L1Q7L3B6 337 aa16.13■□□□□ 0.17
PPARGC1B-203ENST00000394320 NOSTRINQ8IVI9 506 aa16.13■□□□□ 0.17
PPARGC1B-203ENST00000394320 IGSF22Q8N9C0 903 aa16.13■□□□□ 0.17
PPARGC1B-203ENST00000394320 MRPL11Q9Y3B7 192 aaKnown RBP16.13■□□□□ 0.17
PPARGC1B-203ENST00000394320 CSADQ9Y600 493 aa16.13■□□□□ 0.17
PPARGC1B-203ENST00000394320 SMCO2A6NFE2 343 aa16.13■□□□□ 0.17
PPARGC1B-203ENST00000394320 OPA1O60313 960 aa16.13■□□□□ 0.17
PPARGC1B-203ENST00000394320 IRX3P78415 501 aaPredicted RBP16.13■□□□□ 0.17
PPARGC1B-203ENST00000394320 BRINP3Q76B58 766 aa16.13■□□□□ 0.17
PPARGC1B-203ENST00000394320 NLRP10Q86W26 655 aa16.13■□□□□ 0.17
PPARGC1B-203ENST00000394320 NAP1L3Q99457 506 aaPredicted RBP16.13■□□□□ 0.17
PPARGC1B-203ENST00000394320 NUCKS1Q9H1E3 243 aaKnown RBP16.13■□□□□ 0.17
PPARGC1B-203ENST00000394320 PTH1RQ03431 593 aa16.13■□□□□ 0.17
PPARGC1B-203ENST00000394320 PABPC4Q13310 644 aaKnown RBP eCLIP16.13■□□□□ 0.178e-9■■■■■ 38
PPARGC1B-203ENST00000394320 HERC4Q5GLZ8 1057 aaPredicted RBP16.13■□□□□ 0.17
PPARGC1B-203ENST00000394320 BLIDQ8IZY5 108 aa16.13■□□□□ 0.17
PPARGC1B-203ENST00000394320 ADGRB3O60242 1522 aa16.13■□□□□ 0.17
PPARGC1B-203ENST00000394320 JAK2O60674 1132 aa16.12■□□□□ 0.17
PPARGC1B-203ENST00000394320 BTDP43251 543 aa16.12■□□□□ 0.17
PPARGC1B-203ENST00000394320 SP4Q02446 784 aa16.12■□□□□ 0.17
PPARGC1B-203ENST00000394320 OTUD7BQ6GQQ9 843 aa16.12■□□□□ 0.17
PPARGC1B-203ENST00000394320 FAM212AQ96EL1 285 aa16.12■□□□□ 0.17
PPARGC1B-203ENST00000394320 ZSWIM4Q9H7M6 989 aa16.12■□□□□ 0.17
PPARGC1B-203ENST00000394320 CCDC169A6NNP5 214 aa16.12■□□□□ 0.17
PPARGC1B-203ENST00000394320 BIRC3Q13489 604 aa16.12■□□□□ 0.17
PPARGC1B-203ENST00000394320 GNPTABQ3T906 1256 aa16.12■□□□□ 0.17
PPARGC1B-203ENST00000394320 FAM47AQ5JRC9 791 aa16.12■□□□□ 0.17
PPARGC1B-203ENST00000394320 NSMFQ6X4W1 530 aa16.12■□□□□ 0.17
PPARGC1B-203ENST00000394320 ADCY9O60503 1353 aa16.12■□□□□ 0.17
PPARGC1B-203ENST00000394320 STX10O60499 249 aa16.12■□□□□ 0.17
PPARGC1B-203ENST00000394320 EEF2P13639 858 aaKnown RBP16.12■□□□□ 0.17
PPARGC1B-203ENST00000394320 PHKA1P46020 1223 aa16.12■□□□□ 0.17
PPARGC1B-203ENST00000394320 GPHNQ9NQX3 736 aaPredicted RBP16.12■□□□□ 0.17
PPARGC1B-203ENST00000394320 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.12■□□□□ 0.17
PPARGC1B-203ENST00000394320 ATP6V0A2Q9Y487 856 aa16.12■□□□□ 0.17
PPARGC1B-203ENST00000394320 CHMP2AO43633 222 aa16.12■□□□□ 0.17
PPARGC1B-203ENST00000394320 SLC8A3P57103 927 aa16.12■□□□□ 0.17
PPARGC1B-203ENST00000394320 ZNF830Q96NB3 372 aaPredicted RBP16.12■□□□□ 0.17
PPARGC1B-203ENST00000394320 SLC5A4Q9NY91 659 aa16.12■□□□□ 0.17
PPARGC1B-203ENST00000394320 VPS54Q9P1Q0 977 aa16.12■□□□□ 0.17
PPARGC1B-203ENST00000394320 GUCA1BQ9UMX6 200 aa16.12■□□□□ 0.17
PPARGC1B-203ENST00000394320 GNA14O95837 355 aa16.11■□□□□ 0.17
PPARGC1B-203ENST00000394320 CFBP00751 764 aa16.11■□□□□ 0.17
PPARGC1B-203ENST00000394320 FOSP01100 380 aaPredicted RBP16.11■□□□□ 0.17
PPARGC1B-203ENST00000394320 DNM2P50570 870 aa16.11■□□□□ 0.17
PPARGC1B-203ENST00000394320 CYP26C1Q6V0L0 522 aa16.11■□□□□ 0.17
PPARGC1B-203ENST00000394320 MCF2L2Q86YR7 1114 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms