RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 C4AP0C0L4 1744 aa20.53■□□□□ 0.88
ERCC2-201ENST00000391941 C4BP0C0L5 1744 aa20.53■□□□□ 0.88
ERCC2-201ENST00000391941 MORC3Q14149 939 aa20.53■□□□□ 0.88
ERCC2-201ENST00000391941 NR1I3Q14994 352 aa20.53■□□□□ 0.88
ERCC2-201ENST00000391941 TOM1L2Q6ZVM7 507 aa20.53■□□□□ 0.88
ERCC2-201ENST00000391941 DNAJC10Q8IXB1 793 aa20.53■□□□□ 0.88
ERCC2-201ENST00000391941 RGS22Q8NE09 1264 aa20.53■□□□□ 0.88
ERCC2-201ENST00000391941 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.53■□□□□ 0.882e-6■■■■□ 20.6
ERCC2-201ENST00000391941 NAPBQ9H115 298 aa20.53■□□□□ 0.88
ERCC2-201ENST00000391941 ACTN4O43707 911 aaKnown RBP20.52■□□□□ 0.88
ERCC2-201ENST00000391941 MMP1P03956 469 aa20.52■□□□□ 0.88
ERCC2-201ENST00000391941 TCIRG1Q13488 830 aa20.52■□□□□ 0.88
ERCC2-201ENST00000391941 KIF4BQ2VIQ3 1234 aa20.52■□□□□ 0.88
ERCC2-201ENST00000391941 SLC35F6Q8N357 371 aa20.52■□□□□ 0.88
ERCC2-201ENST00000391941 TTLL11Q8NHH1 800 aa20.52■□□□□ 0.88
ERCC2-201ENST00000391941 STRBPQ96SI9 672 aaKnown RBP20.52■□□□□ 0.88
ERCC2-201ENST00000391941 FEZ2Q9UHY8 353 aaPredicted RBP20.52■□□□□ 0.88
ERCC2-201ENST00000391941 RIPOR2Q9Y4F9 1068 aa20.52■□□□□ 0.88
ERCC2-201ENST00000391941 ADGRG1Q9Y653 693 aa20.52■□□□□ 0.88
ERCC2-201ENST00000391941 C1orf167Q5SNV9 1468 aa20.52■□□□□ 0.88
ERCC2-201ENST00000391941 AKR1B15C9JRZ8 316 aaPredicted RBP20.52■□□□□ 0.88
ERCC2-201ENST00000391941 FAM193AP78312 1265 aa20.52■□□□□ 0.88
ERCC2-201ENST00000391941 ABCB6Q9NP58 842 aa20.52■□□□□ 0.88
ERCC2-201ENST00000391941 ASAP1Q9ULH1 1129 aa20.52■□□□□ 0.88
ERCC2-201ENST00000391941 TXLNAP40222 546 aa20.52■□□□□ 0.87
ERCC2-201ENST00000391941 NCAPH2Q6IBW4 605 aa20.52■□□□□ 0.87
ERCC2-201ENST00000391941 STRN4Q9NRL3 753 aa20.52■□□□□ 0.87
ERCC2-201ENST00000391941 RIC1Q4ADV7 1423 aa20.51■□□□□ 0.87
ERCC2-201ENST00000391941 TULP2O00295 520 aa20.51■□□□□ 0.87
ERCC2-201ENST00000391941 CCDC175P0C221 793 aa20.51■□□□□ 0.87
ERCC2-201ENST00000391941 IFNL3Q8IZI9 196 aa20.51■□□□□ 0.87
ERCC2-201ENST00000391941 VPS16Q9H269 839 aa20.51■□□□□ 0.87
ERCC2-201ENST00000391941 PTPREP23469 700 aa20.51■□□□□ 0.87
ERCC2-201ENST00000391941 APTXQ7Z2E3 356 aaKnown RBP20.51■□□□□ 0.87
ERCC2-201ENST00000391941 NOA1Q8NC60 698 aaKnown RBP20.51■□□□□ 0.87
ERCC2-201ENST00000391941 ISCA1Q9BUE6 129 aa20.51■□□□□ 0.87
ERCC2-201ENST00000391941 WTIPA6NIX2 430 aaPredicted RBP20.5■□□□□ 0.87
ERCC2-201ENST00000391941 ENC1O14682 589 aa20.5■□□□□ 0.87
ERCC2-201ENST00000391941 ZMYND10O75800 440 aa20.5■□□□□ 0.87
ERCC2-201ENST00000391941 TPM1P09493 284 aa20.5■□□□□ 0.87
ERCC2-201ENST00000391941 VSNL1P62760 191 aa20.5■□□□□ 0.87
ERCC2-201ENST00000391941 EVX2Q03828 476 aa20.5■□□□□ 0.87
ERCC2-201ENST00000391941 CYP2D7A0A087X1C5 515 aa20.5■□□□□ 0.87
ERCC2-201ENST00000391941 ADAMTS3O15072 1205 aa20.5■□□□□ 0.87
ERCC2-201ENST00000391941 SARSP49591 514 aaKnown RBP20.5■□□□□ 0.87
ERCC2-201ENST00000391941 NUTM2AQ8IVF1 878 aaPredicted RBP20.5■□□□□ 0.87
ERCC2-201ENST00000391941 LCORLQ8N3X6 602 aa20.5■□□□□ 0.87
ERCC2-201ENST00000391941 ENOX1Q8TC92 643 aaKnown RBP20.5■□□□□ 0.87
ERCC2-201ENST00000391941 RABGGTAQ92696 567 aa20.5■□□□□ 0.87
ERCC2-201ENST00000391941 FAN1Q9Y2M0 1017 aa20.5■□□□□ 0.87
ERCC2-201ENST00000391941 KAT6BQ8WYB5 2073 aa20.5■□□□□ 0.87
ERCC2-201ENST00000391941 MINDY4BA8MYZ0 360 aa20.49■□□□□ 0.87
ERCC2-201ENST00000391941 MYO1BO43795 1136 aa20.49■□□□□ 0.87
ERCC2-201ENST00000391941 FMNL1O95466 1100 aaPredicted RBP20.49■□□□□ 0.87
ERCC2-201ENST00000391941 ZNF174Q15697 407 aa20.49■□□□□ 0.87
ERCC2-201ENST00000391941 RTN1Q16799 776 aa20.49■□□□□ 0.87
ERCC2-201ENST00000391941 PPFIBP1Q86W92 1011 aa20.49■□□□□ 0.87
ERCC2-201ENST00000391941 ZCRB1Q8TBF4 217 aaKnown RBP20.49■□□□□ 0.87
ERCC2-201ENST00000391941 SDR42E1Q8WUS8 393 aa20.49■□□□□ 0.87
ERCC2-201ENST00000391941 CTNND2Q9UQB3 1225 aa20.49■□□□□ 0.87
ERCC2-201ENST00000391941 SAFBQ15424 915 aaKnown RBP eCLIP20.49■□□□□ 0.87
ERCC2-201ENST00000391941 SLC4A8Q2Y0W8 1093 aa20.49■□□□□ 0.87
ERCC2-201ENST00000391941 CERS3Q8IU89 383 aa20.49■□□□□ 0.87
ERCC2-201ENST00000391941 HDAC6Q9UBN7 1215 aa20.49■□□□□ 0.87
ERCC2-201ENST00000391941 GYPCP04921 128 aa20.48■□□□□ 0.87
ERCC2-201ENST00000391941 TDO2P48775 406 aa20.48■□□□□ 0.87
ERCC2-201ENST00000391941 SLF1Q9BQI6 1058 aa20.48■□□□□ 0.87
ERCC2-201ENST00000391941 GOLGB1Q14789 3259 aaKnown RBP20.48■□□□□ 0.87
ERCC2-201ENST00000391941 NUP188Q5SRE5 1749 aa20.48■□□□□ 0.87
ERCC2-201ENST00000391941 DDX60Q8IY21 1712 aaKnown RBP20.48■□□□□ 0.87
ERCC2-201ENST00000391941 LAMB4A4D0S4 1761 aa20.48■□□□□ 0.87
ERCC2-201ENST00000391941 TCRBV5S4A2TA0A5A2 114 aa20.48■□□□□ 0.87
ERCC2-201ENST00000391941 MLKLQ8NB16 471 aa20.48■□□□□ 0.87
ERCC2-201ENST00000391941 SYMPKQ92797 1274 aaKnown RBP20.48■□□□□ 0.87
ERCC2-201ENST00000391941 A0A1B0GTH6 734 aa20.48■□□□□ 0.87
ERCC2-201ENST00000391941 PLCD1P51178 756 aa20.48■□□□□ 0.87
ERCC2-201ENST00000391941 ERVK-24P63145 666 aa20.48■□□□□ 0.87
ERCC2-201ENST00000391941 SRGAP1Q7Z6B7 1085 aa20.48■□□□□ 0.87
ERCC2-201ENST00000391941 TMEM87BQ96K49 555 aa20.48■□□□□ 0.87
ERCC2-201ENST00000391941 TAB2Q9NYJ8 693 aa20.48■□□□□ 0.87
ERCC2-201ENST00000391941 SYNRGQ9UMZ2 1314 aa20.48■□□□□ 0.87
ERCC2-201ENST00000391941 GOLGA6L9A6NEM1 432 aa20.47■□□□□ 0.87
ERCC2-201ENST00000391941 SRGAP2O75044 1071 aa20.47■□□□□ 0.87
ERCC2-201ENST00000391941 BEND6Q5SZJ8 279 aaPredicted RBP20.47■□□□□ 0.87
ERCC2-201ENST00000391941 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.47■□□□□ 0.87
ERCC2-201ENST00000391941 FBXO3Q9UK99 471 aa20.47■□□□□ 0.87
ERCC2-201ENST00000391941 TBC1D2BQ9UPU7 963 aa20.47■□□□□ 0.87
ERCC2-201ENST00000391941 RASGRF1Q13972 1273 aa20.47■□□□□ 0.87
ERCC2-201ENST00000391941 MFSD6Q6ZSS7 791 aa20.47■□□□□ 0.87
ERCC2-201ENST00000391941 GSPT2Q8IYD1 628 aaKnown RBP20.47■□□□□ 0.87
ERCC2-201ENST00000391941 CCDC102AQ96A19 550 aa20.47■□□□□ 0.87
ERCC2-201ENST00000391941 PES1O00541 588 aaKnown RBP20.46■□□□□ 0.87
ERCC2-201ENST00000391941 KIF5CO60282 957 aa20.46■□□□□ 0.87
ERCC2-201ENST00000391941 VEGFAP15692 232 aaPredicted RBP20.46■□□□□ 0.87
ERCC2-201ENST00000391941 MRPS25P82663 173 aaKnown RBP20.46■□□□□ 0.87
ERCC2-201ENST00000391941 JAKMIP3Q5VZ66 844 aa20.46■□□□□ 0.87
ERCC2-201ENST00000391941 CHP1Q99653 195 aa20.46■□□□□ 0.87
ERCC2-201ENST00000391941 HOOK1Q9UJC3 728 aaKnown RBP20.46■□□□□ 0.87
ERCC2-201ENST00000391941 GSG1L2A8MUP6 293 aa20.46■□□□□ 0.87
ERCC2-201ENST00000391941 WTAPQ15007 396 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms