RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 CALM3P0DP25 149 aa17.18■□□□□ 0.34
SCFD2-201ENST00000388940 XBP1P17861 261 aa17.18■□□□□ 0.34
SCFD2-201ENST00000388940 KCNJ6P48051 423 aa17.18■□□□□ 0.34
SCFD2-201ENST00000388940 RPS8P62241 208 aaKnown RBP17.18■□□□□ 0.34
SCFD2-201ENST00000388940 DYNLL1P63167 89 aaKnown RBP17.18■□□□□ 0.34
SCFD2-201ENST00000388940 MYL5Q02045 173 aa17.18■□□□□ 0.34
SCFD2-201ENST00000388940 FUT2Q10981 343 aa17.18■□□□□ 0.34
SCFD2-201ENST00000388940 NYAP1Q6ZVC0 841 aa17.18■□□□□ 0.34
SCFD2-201ENST00000388940 FOXP4Q8IVH2 680 aaPredicted RBP17.18■□□□□ 0.34
SCFD2-201ENST00000388940 LAMB1P07942 1786 aa17.18■□□□□ 0.34
SCFD2-201ENST00000388940 FANCCQ00597 558 aa17.17■□□□□ 0.34
SCFD2-201ENST00000388940 SYCP1Q15431 976 aa17.17■□□□□ 0.34
SCFD2-201ENST00000388940 NT5DC1Q5TFE4 455 aa17.17■□□□□ 0.34
SCFD2-201ENST00000388940 CTR9Q6PD62 1173 aa17.17■□□□□ 0.34
SCFD2-201ENST00000388940 OLFM4Q6UX06 510 aa17.17■□□□□ 0.34
SCFD2-201ENST00000388940 NSUN4Q96CB9 384 aaKnown RBP17.17■□□□□ 0.34
SCFD2-201ENST00000388940 ANKRD2Q9GZV1 360 aa17.17■□□□□ 0.34
SCFD2-201ENST00000388940 PCDHA5Q9Y5H7 936 aa17.17■□□□□ 0.34
SCFD2-201ENST00000388940 MAST2Q6P0Q8 1798 aa17.17■□□□□ 0.34
SCFD2-201ENST00000388940 CCDC88AQ3V6T2 1871 aa17.17■□□□□ 0.34
SCFD2-201ENST00000388940 GTF2E1P29083 439 aaPredicted RBP17.17■□□□□ 0.34
SCFD2-201ENST00000388940 AKAP17AQ02040 695 aaKnown RBP17.17■□□□□ 0.34
SCFD2-201ENST00000388940 PKN1Q16512 942 aa17.17■□□□□ 0.34
SCFD2-201ENST00000388940 CATIPQ7Z7H3 387 aa17.17■□□□□ 0.34
SCFD2-201ENST00000388940 IQCA1Q86XH1 822 aa17.17■□□□□ 0.34
SCFD2-201ENST00000388940 CMTR1Q8N1G2 835 aaKnown RBP17.17■□□□□ 0.34
SCFD2-201ENST00000388940 CCDC82Q8N4S0 544 aa17.17■□□□□ 0.34
SCFD2-201ENST00000388940 NLRP3Q96P20 1036 aa17.17■□□□□ 0.34
SCFD2-201ENST00000388940 TAOK2Q9UL54 1235 aa17.17■□□□□ 0.34
SCFD2-201ENST00000388940 CBFA2T2O43439 604 aa17.16■□□□□ 0.34
SCFD2-201ENST00000388940 ORC4O43929 436 aa17.16■□□□□ 0.34
SCFD2-201ENST00000388940 RPS6KA4O75676 772 aa17.16■□□□□ 0.34
SCFD2-201ENST00000388940 NR5A1Q13285 461 aa17.16■□□□□ 0.34
SCFD2-201ENST00000388940 IFIT1BQ5T764 474 aaKnown RBP17.16■□□□□ 0.34
SCFD2-201ENST00000388940 TMC6Q7Z403 805 aa17.16■□□□□ 0.34
SCFD2-201ENST00000388940 CCAR2Q8N163 923 aaKnown RBP17.16■□□□□ 0.34
SCFD2-201ENST00000388940 PHF20Q9BVI0 1012 aa17.16■□□□□ 0.34
SCFD2-201ENST00000388940 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.16■□□□□ 0.34
SCFD2-201ENST00000388940 PCDHB6Q9Y5E3 794 aa17.16■□□□□ 0.34
SCFD2-201ENST00000388940 KIAA1551Q9HCM1 1747 aa17.16■□□□□ 0.34
SCFD2-201ENST00000388940 A0A0U1RQG5 324 aaPredicted RBP17.16■□□□□ 0.34
SCFD2-201ENST00000388940 IGSF3O75054 1194 aa17.16■□□□□ 0.34
SCFD2-201ENST00000388940 DDAH1O94760 285 aa17.16■□□□□ 0.34
SCFD2-201ENST00000388940 CEP135Q66GS9 1140 aa17.16■□□□□ 0.34
SCFD2-201ENST00000388940 ISM2Q6H9L7 571 aa17.16■□□□□ 0.34
SCFD2-201ENST00000388940 KANK3Q6NY19 840 aa17.16■□□□□ 0.34
SCFD2-201ENST00000388940 OXER1Q8TDS5 423 aa17.16■□□□□ 0.34
SCFD2-201ENST00000388940 TSC1Q92574 1164 aa17.16■□□□□ 0.34
SCFD2-201ENST00000388940 LMOD1P29536 600 aaPredicted RBP17.15■□□□□ 0.34
SCFD2-201ENST00000388940 SARSP49591 514 aaKnown RBP17.15■□□□□ 0.34
SCFD2-201ENST00000388940 TROAPQ12815 778 aa17.15■□□□□ 0.34
SCFD2-201ENST00000388940 PTPN14Q15678 1187 aa17.15■□□□□ 0.34
SCFD2-201ENST00000388940 SETDB2Q96T68 719 aa17.15■□□□□ 0.34
SCFD2-201ENST00000388940 USP27XA6NNY8 438 aa17.15■□□□□ 0.34
SCFD2-201ENST00000388940 SMIM22K7EJ46 135 aa17.15■□□□□ 0.34
SCFD2-201ENST00000388940 HIBADHP31937 336 aaKnown RBP17.15■□□□□ 0.34
SCFD2-201ENST00000388940 MECOMQ03112 1051 aa17.15■□□□□ 0.34
SCFD2-201ENST00000388940 POSTNQ15063 836 aa17.15■□□□□ 0.34
SCFD2-201ENST00000388940 VPS72Q15906 364 aa17.15■□□□□ 0.34
SCFD2-201ENST00000388940 ARMCX5Q6P1M9 558 aa17.15■□□□□ 0.34
SCFD2-201ENST00000388940 BICDL1Q6ZP65 573 aa17.15■□□□□ 0.34
SCFD2-201ENST00000388940 ANKRD7Q92527 254 aa17.15■□□□□ 0.34
SCFD2-201ENST00000388940 SHISA4Q96DD7 197 aa17.15■□□□□ 0.34
SCFD2-201ENST00000388940 CABP5Q9NP86 173 aa17.15■□□□□ 0.34
SCFD2-201ENST00000388940 ATP8A2Q9NTI2 1148 aa17.15■□□□□ 0.34
SCFD2-201ENST00000388940 KIF2AO00139 706 aaPredicted RBP17.14■□□□□ 0.33
SCFD2-201ENST00000388940 KRT2P35908 639 aa17.14■□□□□ 0.33
SCFD2-201ENST00000388940 GRIN1Q05586 938 aa17.14■□□□□ 0.33
SCFD2-201ENST00000388940 FAM98CQ17RN3 349 aaKnown RBP17.14■□□□□ 0.33
SCFD2-201ENST00000388940 SBK1Q52WX2 424 aa17.14■□□□□ 0.33
SCFD2-201ENST00000388940 TRIML1Q8N9V2 468 aa17.14■□□□□ 0.33
SCFD2-201ENST00000388940 CRNKL1Q9BZJ0 848 aaKnown RBP17.14■□□□□ 0.33
SCFD2-201ENST00000388940 CYP2D7A0A087X1C5 515 aa17.13■□□□□ 0.33
SCFD2-201ENST00000388940 PSDA5PKW4 1024 aaPredicted RBP17.13■□□□□ 0.33
SCFD2-201ENST00000388940 USP17L12C9JPN9 530 aa17.13■□□□□ 0.33
SCFD2-201ENST00000388940 USP17L21D6R901 530 aa17.13■□□□□ 0.33
SCFD2-201ENST00000388940 NRDCO43847 1150 aa17.13■□□□□ 0.33
SCFD2-201ENST00000388940 BMP15O95972 392 aa17.13■□□□□ 0.33
SCFD2-201ENST00000388940 BMP6P22004 513 aa17.13■□□□□ 0.33
SCFD2-201ENST00000388940 SFPQP23246 707 aaKnown RBP eCLIP17.13■□□□□ 0.33
SCFD2-201ENST00000388940 NT5C2P49902 561 aa17.13■□□□□ 0.33
SCFD2-201ENST00000388940 CCDC112Q8NEF3 446 aa17.13■□□□□ 0.33
SCFD2-201ENST00000388940 AATFQ9NY61 560 aaKnown RBP eCLIP17.13■□□□□ 0.33
SCFD2-201ENST00000388940 TRIM75PA6NK02 468 aa17.13■□□□□ 0.33
SCFD2-201ENST00000388940 POLR2DO15514 142 aaKnown RBP17.13■□□□□ 0.33
SCFD2-201ENST00000388940 ATP1A3P13637 1013 aa17.13■□□□□ 0.33
SCFD2-201ENST00000388940 UBASH3AP57075 661 aa17.13■□□□□ 0.33
SCFD2-201ENST00000388940 SPECC1Q5M775 1068 aa17.13■□□□□ 0.33
SCFD2-201ENST00000388940 TMTC3Q6ZXV5 915 aa17.13■□□□□ 0.33
SCFD2-201ENST00000388940 MLKLQ8NB16 471 aa17.13■□□□□ 0.33
SCFD2-201ENST00000388940 DCP1AQ9NPI6 582 aaPredicted RBP17.13■□□□□ 0.33
SCFD2-201ENST00000388940 SERTAD1Q9UHV2 236 aa17.13■□□□□ 0.33
SCFD2-201ENST00000388940 MAN1B1Q9UKM7 699 aa17.13■□□□□ 0.33
SCFD2-201ENST00000388940 BTAF1O14981 1849 aa17.13■□□□□ 0.33
SCFD2-201ENST00000388940 KLRK1P26718 216 aa17.12■□□□□ 0.33
SCFD2-201ENST00000388940 PDE4CQ08493 712 aa17.12■□□□□ 0.33
SCFD2-201ENST00000388940 TPTE2Q6XPS3 522 aa17.12■□□□□ 0.33
SCFD2-201ENST00000388940 NBPF5PQ86XG9 351 aaPredicted RBP17.12■□□□□ 0.33
SCFD2-201ENST00000388940 SPATA20Q8TB22 786 aa17.12■□□□□ 0.33
SCFD2-201ENST00000388940 VPS54Q9P1Q0 977 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms