RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 KIFC2Q96AC6 838 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 PRKAG2Q9UGJ0 569 aa8□□□□□ -1.13
CCDC171-201ENST00000380701 ACTN4O43707 911 aaKnown RBP7.99□□□□□ -1.13
CCDC171-201ENST00000380701 YARSP54577 528 aaKnown RBP7.99□□□□□ -1.13
CCDC171-201ENST00000380701 BIRC2Q13490 618 aa7.99□□□□□ -1.13
CCDC171-201ENST00000380701 MAP7D1Q3KQU3 841 aa7.99□□□□□ -1.13
CCDC171-201ENST00000380701 CCDC129Q6ZRS4 1044 aa7.99□□□□□ -1.13
CCDC171-201ENST00000380701 SYCE1Q8N0S2 351 aa7.99□□□□□ -1.13
CCDC171-201ENST00000380701 RIOK1Q9BRS2 568 aaKnown RBP7.99□□□□□ -1.13
CCDC171-201ENST00000380701 PNMA3Q9UL41 463 aa7.99□□□□□ -1.13
CCDC171-201ENST00000380701 ATP7BP35670 1465 aa7.99□□□□□ -1.13
CCDC171-201ENST00000380701 ADCY5O95622 1261 aa7.99□□□□□ -1.13
CCDC171-201ENST00000380701 POLR2MP0CAP2 368 aa7.99□□□□□ -1.13
CCDC171-201ENST00000380701 VAV2P52735 878 aa7.99□□□□□ -1.13
CCDC171-201ENST00000380701 DEPTORQ8TB45 409 aa7.99□□□□□ -1.13
CCDC171-201ENST00000380701 FAM184BQ9ULE4 1060 aa7.99□□□□□ -1.13
CCDC171-201ENST00000380701 RPAP1Q9BWH6 1393 aaPredicted RBP7.99□□□□□ -1.13
CCDC171-201ENST00000380701 UBXN1Q04323 297 aa7.99□□□□□ -1.13
CCDC171-201ENST00000380701 AKNAD1Q5T1N1 836 aa7.99□□□□□ -1.13
CCDC171-201ENST00000380701 ARHGAP27Q6ZUM4 889 aa7.99□□□□□ -1.13
CCDC171-201ENST00000380701 ZKSCAN3Q9BRR0 538 aa7.99□□□□□ -1.13
CCDC171-201ENST00000380701 MLXIPQ9HAP2 919 aa7.99□□□□□ -1.13
CCDC171-201ENST00000380701 ZRANB1Q9UGI0 708 aa7.99□□□□□ -1.13
CCDC171-201ENST00000380701 C20orf194Q5TEA3 1177 aa7.99□□□□□ -1.13
CCDC171-201ENST00000380701 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.99□□□□□ -1.13
CCDC171-201ENST00000380701 CCT6BQ92526 530 aa7.99□□□□□ -1.13
CCDC171-201ENST00000380701 LOC102724428A0A0B4J2F2 783 aa7.99□□□□□ -1.13
CCDC171-201ENST00000380701 ARL1P40616 181 aaPredicted RBP7.99□□□□□ -1.13
CCDC171-201ENST00000380701 SIK1P57059 783 aa7.99□□□□□ -1.13
CCDC171-201ENST00000380701 HS1BP3Q53T59 392 aa7.99□□□□□ -1.13
CCDC171-201ENST00000380701 EAPPQ56P03 285 aaPredicted RBP7.99□□□□□ -1.13
CCDC171-201ENST00000380701 ZNF496Q96IT1 587 aaPredicted RBP7.99□□□□□ -1.13
CCDC171-201ENST00000380701 MYCLP12524 364 aaPredicted RBP7.98□□□□□ -1.13
CCDC171-201ENST00000380701 KRT10P13645 584 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 APOBRQ0VD83 1088 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 CUL4BQ13620 913 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 SLC4A8Q2Y0W8 1093 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 NECAB1Q8N987 351 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 GSDMBQ8TAX9 411 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 GLG1Q92896 1179 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 CCDC114Q96M63 670 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 FAM193BQ96PV7 902 aaPredicted RBP7.98□□□□□ -1.13
CCDC171-201ENST00000380701 ARMT1Q9H993 441 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 SAP30BPQ9UHR5 308 aaKnown RBP7.98□□□□□ -1.13
CCDC171-201ENST00000380701 ADGRL3Q9HAR2 1447 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 GIPC1O14908 333 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 COPB2P35606 906 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 PDE4DQ08499 809 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 UBE3CQ15386 1083 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 ANO1Q5XXA6 986 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 SNX29Q8TEQ0 813 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 DDX23Q9BUQ8 820 aaKnown RBP7.98□□□□□ -1.13
CCDC171-201ENST00000380701 AP5M1Q9H0R1 490 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 DACT1Q9NYF0 836 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 PLEKHG2Q9H7P9 1386 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 A0A1B0GVL5 298 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 DAPK3O43293 454 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 GAS7O60861 476 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 CALCRLQ16602 461 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 UTP14CQ5TAP6 766 aaKnown RBP7.98□□□□□ -1.13
CCDC171-201ENST00000380701 MIER3Q7Z3K6 550 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 ANKS4BQ8N8V4 417 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 CACYBPQ9HB71 228 aaKnown RBP7.98□□□□□ -1.13
CCDC171-201ENST00000380701 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.98□□□□□ -1.13
CCDC171-201ENST00000380701 BCCIPQ9P287 314 aaKnown RBP eCLIP7.98□□□□□ -1.13
CCDC171-201ENST00000380701 MKRN1Q9UHC7 482 aaKnown RBP7.98□□□□□ -1.13
CCDC171-201ENST00000380701 LAD1O00515 517 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 FLOT1O75955 427 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 PRPF6O94906 941 aaKnown RBP7.98□□□□□ -1.13
CCDC171-201ENST00000380701 IREB2P48200 963 aaKnown RBP7.98□□□□□ -1.13
CCDC171-201ENST00000380701 AK2P54819 239 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 PLEKHM2Q8IWE5 1019 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 C10orf67Q8IYJ2 551 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 FBF1Q8TES7 1133 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 ZBTB21Q9ULJ3 1066 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 KDM5CP41229 1560 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 F8W8V4 182 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 DNA2P51530 1060 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 TBC1D31Q96DN5 1066 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 CFAP57Q96MR6 1250 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 DBNDD2Q9BQY9 259 aa7.98□□□□□ -1.13
CCDC171-201ENST00000380701 METTL14Q9HCE5 456 aaKnown RBP7.98□□□□□ -1.13
CCDC171-201ENST00000380701 TNNC2P02585 160 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 ASPRV1Q53RT3 343 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 CLEC4GQ6UXB4 293 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 TRIML1Q8N9V2 468 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 ATP6V0A1Q93050 837 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 NOC4LQ9BVI4 516 aaKnown RBP7.97□□□□□ -1.13
CCDC171-201ENST00000380701 LARSQ9P2J5 1176 aaKnown RBP7.97□□□□□ -1.13
CCDC171-201ENST00000380701 NEURL1BA8MQ27 555 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 E7EVH7 732 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 GCFC2P16383 781 aaKnown RBP7.97□□□□□ -1.13
CCDC171-201ENST00000380701 MARCKSP29966 332 aaPredicted RBP7.97□□□□□ -1.13
CCDC171-201ENST00000380701 GTF2IP78347 998 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 POSTNQ15063 836 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 SPOUT1Q5T280 376 aaKnown RBP7.97□□□□□ -1.13
CCDC171-201ENST00000380701 UNC5CLQ8IV45 518 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 DIS3L2Q8IYB7 885 aaKnown RBP7.97□□□□□ -1.13
CCDC171-201ENST00000380701 HAUS1Q96CS2 278 aa7.97□□□□□ -1.13
CCDC171-201ENST00000380701 FAM114A2Q9NRY5 505 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms