RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 RIMBP2O15034 1052 aa9.06□□□□□ -0.96
CDKL5-202ENST00000379996 CHGBP05060 677 aa9.06□□□□□ -0.96
CDKL5-202ENST00000379996 ZNF280AP59817 542 aaPredicted RBP9.06□□□□□ -0.96
CDKL5-202ENST00000379996 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.06□□□□□ -0.96
CDKL5-202ENST00000379996 TTC6Q86TZ1 520 aa9.06□□□□□ -0.96
CDKL5-202ENST00000379996 DPF2Q92785 391 aa9.06□□□□□ -0.96
CDKL5-202ENST00000379996 OSBP2Q969R2 916 aa9.06□□□□□ -0.96
CDKL5-202ENST00000379996 SYAP1Q96A49 352 aaPredicted RBP9.06□□□□□ -0.96
CDKL5-202ENST00000379996 ZBED3Q96IU2 234 aaPredicted RBP9.06□□□□□ -0.96
CDKL5-202ENST00000379996 ZDHHC15Q96MV8 337 aa9.06□□□□□ -0.96
CDKL5-202ENST00000379996 RRP9O43818 475 aaKnown RBP9.06□□□□□ -0.96
CDKL5-202ENST00000379996 MFSD14BQ5SR56 506 aa9.06□□□□□ -0.96
CDKL5-202ENST00000379996 NAP1L5Q96NT1 182 aaPredicted RBP9.06□□□□□ -0.96
CDKL5-202ENST00000379996 LRP2BPQ9P2M1 347 aa9.06□□□□□ -0.96
CDKL5-202ENST00000379996 NDUFB9Q9Y6M9 179 aa9.06□□□□□ -0.96
CDKL5-202ENST00000379996 M0R2C6 588 aa9.06□□□□□ -0.96
CDKL5-202ENST00000379996 FOXP2O15409 715 aa9.06□□□□□ -0.96
CDKL5-202ENST00000379996 LETM1O95202 739 aaPredicted RBP9.06□□□□□ -0.96
CDKL5-202ENST00000379996 ADD1P35611 737 aaKnown RBP9.06□□□□□ -0.96
CDKL5-202ENST00000379996 DOK7Q18PE1 504 aa9.06□□□□□ -0.96
CDKL5-202ENST00000379996 NAA16Q6N069 864 aaPredicted RBP9.06□□□□□ -0.96
CDKL5-202ENST00000379996 MAGEB6Q8N7X4 407 aa9.06□□□□□ -0.96
CDKL5-202ENST00000379996 SMARCC2Q8TAQ2 1214 aa9.06□□□□□ -0.96
CDKL5-202ENST00000379996 STRBPQ96SI9 672 aaKnown RBP9.06□□□□□ -0.96
CDKL5-202ENST00000379996 NPDC1Q9NQX5 325 aaPredicted RBP9.06□□□□□ -0.96
CDKL5-202ENST00000379996 ROBO3Q96MS0 1386 aa9.05□□□□□ -0.96
CDKL5-202ENST00000379996 PLCG2P16885 1265 aa9.05□□□□□ -0.96
CDKL5-202ENST00000379996 PRDX5P30044 214 aa9.05□□□□□ -0.96
CDKL5-202ENST00000379996 GTF2IP78347 998 aa9.05□□□□□ -0.96
CDKL5-202ENST00000379996 STOX1Q6ZVD7 989 aa9.05□□□□□ -0.96
CDKL5-202ENST00000379996 DBNDD1Q9H9R9 158 aa9.05□□□□□ -0.96
CDKL5-202ENST00000379996 SMC3Q9UQE7 1217 aa9.05□□□□□ -0.96
CDKL5-202ENST00000379996 SIPA1L1O43166 1804 aa9.05□□□□□ -0.96
CDKL5-202ENST00000379996 TBC1D12O60347 775 aa9.05□□□□□ -0.96
CDKL5-202ENST00000379996 FBXL16Q8N461 479 aa9.05□□□□□ -0.96
CDKL5-202ENST00000379996 NECAB1Q8N987 351 aa9.05□□□□□ -0.96
CDKL5-202ENST00000379996 JDP2Q8WYK2 163 aa9.05□□□□□ -0.96
CDKL5-202ENST00000379996 GTF3C6Q969F1 213 aa9.05□□□□□ -0.96
CDKL5-202ENST00000379996 PUS7LQ9H0K6 701 aaKnown RBP9.05□□□□□ -0.96
CDKL5-202ENST00000379996 KCNF1Q9H3M0 494 aa9.05□□□□□ -0.96
CDKL5-202ENST00000379996 DTNBO60941 627 aa9.05□□□□□ -0.96
CDKL5-202ENST00000379996 IDH1O75874 414 aaKnown RBP9.05□□□□□ -0.96
CDKL5-202ENST00000379996 RASSF7Q02833 373 aa9.05□□□□□ -0.96
CDKL5-202ENST00000379996 RESTQ13127 1097 aa9.05□□□□□ -0.96
CDKL5-202ENST00000379996 ADGRA1Q86SQ6 560 aa9.05□□□□□ -0.96
CDKL5-202ENST00000379996 LIMD1Q9UGP4 676 aa9.05□□□□□ -0.96
CDKL5-202ENST00000379996 MKRN1Q9UHC7 482 aaKnown RBP9.05□□□□□ -0.96
CDKL5-202ENST00000379996 GREB1LQ9C091 1923 aaPredicted RBP9.04□□□□□ -0.96
CDKL5-202ENST00000379996 SMAPO00193 183 aa9.04□□□□□ -0.96
CDKL5-202ENST00000379996 TIE1P35590 1138 aa9.04□□□□□ -0.96
CDKL5-202ENST00000379996 CIAPIN1Q6FI81 312 aa9.04□□□□□ -0.96
CDKL5-202ENST00000379996 PADI6Q6TGC4 694 aa9.04□□□□□ -0.96
CDKL5-202ENST00000379996 GPC2Q8N158 579 aa9.04□□□□□ -0.96
CDKL5-202ENST00000379996 RNF214Q8ND24 703 aa9.04□□□□□ -0.96
CDKL5-202ENST00000379996 ANAPC4Q9UJX5 808 aa9.04□□□□□ -0.96
CDKL5-202ENST00000379996 MYH1P12882 1939 aa9.04□□□□□ -0.96
CDKL5-202ENST00000379996 PATL2C9JE40 543 aaKnown RBP9.04□□□□□ -0.96
CDKL5-202ENST00000379996 PSMD14O00487 310 aa9.04□□□□□ -0.96
CDKL5-202ENST00000379996 GPAA1O43292 621 aa9.04□□□□□ -0.96
CDKL5-202ENST00000379996 KDM4AO75164 1064 aa9.04□□□□□ -0.96
CDKL5-202ENST00000379996 BAG3O95817 575 aa9.04□□□□□ -0.96
CDKL5-202ENST00000379996 GTF2F1P35269 517 aaKnown RBP eCLIP9.04□□□□□ -0.962e-6■■■■□ 23.7
CDKL5-202ENST00000379996 CXCL9Q07325 125 aa9.04□□□□□ -0.96
CDKL5-202ENST00000379996 QPCTQ16769 361 aa9.04□□□□□ -0.96
CDKL5-202ENST00000379996 FKBP1CQ5VVH2 108 aa9.04□□□□□ -0.96
CDKL5-202ENST00000379996 DZIP1Q86YF9 867 aaKnown RBP9.04□□□□□ -0.96
CDKL5-202ENST00000379996 ATP8A2Q9NTI2 1148 aa9.04□□□□□ -0.96
CDKL5-202ENST00000379996 RAI14Q9P0K7 980 aa9.04□□□□□ -0.96
CDKL5-202ENST00000379996 PAPPA2Q9BXP8 1791 aa9.04□□□□□ -0.96
CDKL5-202ENST00000379996 MAGEB6P1A0A0J9YX57 407 aa9.03□□□□□ -0.96
CDKL5-202ENST00000379996 CTDNEP1O95476 244 aa9.03□□□□□ -0.96
CDKL5-202ENST00000379996 CYP21A2P08686 494 aa9.03□□□□□ -0.96
CDKL5-202ENST00000379996 HSPD1P10809 573 aaKnown RBP9.03□□□□□ -0.96
CDKL5-202ENST00000379996 CYP7A1P22680 504 aa9.03□□□□□ -0.96
CDKL5-202ENST00000379996 EXOSC10Q01780 885 aaKnown RBP9.03□□□□□ -0.96
CDKL5-202ENST00000379996 GRIK5Q16478 980 aa9.03□□□□□ -0.96
CDKL5-202ENST00000379996 SBK1Q52WX2 424 aa9.03□□□□□ -0.96
CDKL5-202ENST00000379996 PIBF1Q8WXW3 757 aa9.03□□□□□ -0.96
CDKL5-202ENST00000379996 L3MBTL3Q96JM7 780 aaPredicted RBP9.03□□□□□ -0.96
CDKL5-202ENST00000379996 GPCPD1Q9NPB8 672 aa9.03□□□□□ -0.96
CDKL5-202ENST00000379996 IQSEC3Q9UPP2 1182 aaPredicted RBP9.03□□□□□ -0.96
CDKL5-202ENST00000379996 MRVI1Q9Y6F6 885 aa9.03□□□□□ -0.96
CDKL5-202ENST00000379996 PCP11498 1178 aaKnown RBP9.03□□□□□ -0.96
CDKL5-202ENST00000379996 CHAF1AQ13111 956 aaPredicted RBP9.03□□□□□ -0.96
CDKL5-202ENST00000379996 MYSM1Q5VVJ2 828 aa9.03□□□□□ -0.96
CDKL5-202ENST00000379996 IDI2Q9BXS1 227 aa9.03□□□□□ -0.96
CDKL5-202ENST00000379996 NEDD4P46934 1319 aa9.03□□□□□ -0.96
CDKL5-202ENST00000379996 FGRP09769 529 aa9.03□□□□□ -0.96
CDKL5-202ENST00000379996 MSNP26038 577 aaKnown RBP9.03□□□□□ -0.96
CDKL5-202ENST00000379996 EIF6P56537 245 aaKnown RBP9.03□□□□□ -0.96
CDKL5-202ENST00000379996 EVCP57679 992 aa9.03□□□□□ -0.96
CDKL5-202ENST00000379996 RHBDL3P58872 404 aa9.03□□□□□ -0.96
CDKL5-202ENST00000379996 HLA-CQ95604 372 aa9.03□□□□□ -0.96
CDKL5-202ENST00000379996 TEKT1Q969V4 418 aa9.03□□□□□ -0.96
CDKL5-202ENST00000379996 PGBD1Q96JS3 809 aa9.03□□□□□ -0.96
CDKL5-202ENST00000379996 KCNQ5Q9NR82 932 aa9.03□□□□□ -0.96
CDKL5-202ENST00000379996 ABCF2Q9UG63 623 aa9.03□□□□□ -0.96
CDKL5-202ENST00000379996 CTNNA3Q9UI47 895 aa9.03□□□□□ -0.96
CDKL5-202ENST00000379996 DAGLAQ9Y4D2 1042 aa9.03□□□□□ -0.96
CDKL5-202ENST00000379996 ATP6V1DQ9Y5K8 247 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms