RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 MCM3P25205 808 aa12.87□□□□□ -0.35
SMAD9-202ENST00000379826 ATP2B2Q01814 1243 aa12.87□□□□□ -0.35
SMAD9-202ENST00000379826 PDE11AQ9HCR9 933 aa12.87□□□□□ -0.35
SMAD9-202ENST00000379826 IKBKBO14920 756 aa12.86□□□□□ -0.35
SMAD9-202ENST00000379826 IL2RBP14784 551 aa12.86□□□□□ -0.35
SMAD9-202ENST00000379826 TSGA10IPQ3SY00 556 aa12.86□□□□□ -0.35
SMAD9-202ENST00000379826 RGS22Q8NE09 1264 aa12.86□□□□□ -0.35
SMAD9-202ENST00000379826 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.86□□□□□ -0.35
SMAD9-202ENST00000379826 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.86□□□□□ -0.35
SMAD9-202ENST00000379826 CSRNP2Q9H175 543 aa12.86□□□□□ -0.35
SMAD9-202ENST00000379826 MKNK2Q9HBH9 465 aa12.86□□□□□ -0.35
SMAD9-202ENST00000379826 PPARDQ03181 441 aa12.86□□□□□ -0.35
SMAD9-202ENST00000379826 ZSCAN26Q16670 478 aa12.86□□□□□ -0.35
SMAD9-202ENST00000379826 TDRD12Q587J7 1177 aaKnown RBP12.86□□□□□ -0.35
SMAD9-202ENST00000379826 CCDC122Q5T0U0 273 aa12.86□□□□□ -0.35
SMAD9-202ENST00000379826 CACNA2D4Q7Z3S7 1137 aa12.86□□□□□ -0.35
SMAD9-202ENST00000379826 NBPF11Q86T75 865 aa12.86□□□□□ -0.35
SMAD9-202ENST00000379826 PARD6BQ9BYG5 372 aa12.86□□□□□ -0.35
SMAD9-202ENST00000379826 KAZALD1Q96I82 304 aa12.86□□□□□ -0.35
SMAD9-202ENST00000379826 RASSF4Q9H2L5 321 aa12.86□□□□□ -0.35
SMAD9-202ENST00000379826 IVLP07476 585 aa12.86□□□□□ -0.35
SMAD9-202ENST00000379826 CYP26C1Q6V0L0 522 aa12.86□□□□□ -0.35
SMAD9-202ENST00000379826 TMTC2Q8N394 836 aa12.86□□□□□ -0.35
SMAD9-202ENST00000379826 SPATA5Q8NB90 893 aa12.86□□□□□ -0.35
SMAD9-202ENST00000379826 OSBPL5Q9H0X9 879 aaPredicted RBP12.86□□□□□ -0.35
SMAD9-202ENST00000379826 SPON1Q9HCB6 807 aa12.86□□□□□ -0.35
SMAD9-202ENST00000379826 RMND1Q9NWS8 449 aa12.86□□□□□ -0.35
SMAD9-202ENST00000379826 PPP6R2O75170 966 aa12.85□□□□□ -0.35
SMAD9-202ENST00000379826 PRR29P0C7W0 189 aa12.85□□□□□ -0.35
SMAD9-202ENST00000379826 ODF2Q5BJF6 829 aa12.85□□□□□ -0.35
SMAD9-202ENST00000379826 TRAPPC3LQ5T215 181 aa12.85□□□□□ -0.35
SMAD9-202ENST00000379826 CYB5R4Q7L1T6 521 aa12.85□□□□□ -0.35
SMAD9-202ENST00000379826 HEATR3Q7Z4Q2 680 aa12.85□□□□□ -0.35
SMAD9-202ENST00000379826 NBPF5PQ86XG9 351 aaPredicted RBP12.85□□□□□ -0.35
SMAD9-202ENST00000379826 KCNB2Q92953 911 aa12.85□□□□□ -0.35
SMAD9-202ENST00000379826 PLEKHA4Q9H4M7 779 aa12.85□□□□□ -0.35
SMAD9-202ENST00000379826 UBA7P41226 1012 aa12.85□□□□□ -0.35
SMAD9-202ENST00000379826 APOA5Q6Q788 366 aa12.85□□□□□ -0.35
SMAD9-202ENST00000379826 KAT14Q9H8E8 782 aa12.85□□□□□ -0.35
SMAD9-202ENST00000379826 ZCCHC17Q9NP64 241 aaKnown RBP12.85□□□□□ -0.35
SMAD9-202ENST00000379826 PTPRUQ92729 1446 aa12.85□□□□□ -0.35
SMAD9-202ENST00000379826 RTL9Q8NET4 1388 aa12.85□□□□□ -0.35
SMAD9-202ENST00000379826 GOLGA6L10A6NI86 522 aa12.85□□□□□ -0.35
SMAD9-202ENST00000379826 CAPN15O75808 1086 aa12.85□□□□□ -0.35
SMAD9-202ENST00000379826 ERCC3P19447 782 aa12.85□□□□□ -0.35
SMAD9-202ENST00000379826 CASP14P31944 242 aa12.85□□□□□ -0.35
SMAD9-202ENST00000379826 DZIP3Q86Y13 1208 aaKnown RBP12.85□□□□□ -0.35
SMAD9-202ENST00000379826 IFNL3Q8IZI9 196 aa12.85□□□□□ -0.35
SMAD9-202ENST00000379826 USO1O60763 962 aaKnown RBP12.85□□□□□ -0.35
SMAD9-202ENST00000379826 HNRNPH2P55795 449 aaKnown RBP12.85□□□□□ -0.35
SMAD9-202ENST00000379826 EXOSC10Q01780 885 aaKnown RBP12.85□□□□□ -0.35
SMAD9-202ENST00000379826 NR5A1Q13285 461 aa12.85□□□□□ -0.35
SMAD9-202ENST00000379826 TBC1D10CQ8IV04 446 aa12.85□□□□□ -0.35
SMAD9-202ENST00000379826 GREM2Q9H772 168 aa12.85□□□□□ -0.35
SMAD9-202ENST00000379826 EXOC1Q9NV70 894 aa12.85□□□□□ -0.35
SMAD9-202ENST00000379826 RIMBP3CA6NJZ7 1639 aa12.84□□□□□ -0.35
SMAD9-202ENST00000379826 RIMBP3BA6NNM3 1639 aa12.84□□□□□ -0.35
SMAD9-202ENST00000379826 RIMBP3Q9UFD9 1639 aa12.84□□□□□ -0.35
SMAD9-202ENST00000379826 PLCD1P51178 756 aa12.84□□□□□ -0.35
SMAD9-202ENST00000379826 LRRN4CLQ8ND94 238 aa12.84□□□□□ -0.35
SMAD9-202ENST00000379826 NELFBQ8WX92 580 aa12.84□□□□□ -0.35
SMAD9-202ENST00000379826 CASP1P29466 404 aa12.84□□□□□ -0.35
SMAD9-202ENST00000379826 EIF6P56537 245 aaKnown RBP12.84□□□□□ -0.35
SMAD9-202ENST00000379826 USPL1Q5W0Q7 1092 aa12.84□□□□□ -0.35
SMAD9-202ENST00000379826 TTF2Q9UNY4 1162 aaKnown RBP12.84□□□□□ -0.35
SMAD9-202ENST00000379826 SH2B2O14492 632 aaPredicted RBP12.84□□□□□ -0.35
SMAD9-202ENST00000379826 PHKA1P46020 1223 aa12.84□□□□□ -0.35
SMAD9-202ENST00000379826 MSL1Q68DK7 614 aa12.84□□□□□ -0.35
SMAD9-202ENST00000379826 SEPT12Q8IYM1 358 aa12.84□□□□□ -0.35
SMAD9-202ENST00000379826 ACRBPQ8NEB7 543 aa12.84□□□□□ -0.35
SMAD9-202ENST00000379826 FAM107BQ9H098 131 aa12.84□□□□□ -0.35
SMAD9-202ENST00000379826 MROH7-TTC4A0A0A0MT08 1334 aa12.84□□□□□ -0.35
SMAD9-202ENST00000379826 PDE6AP16499 860 aa12.84□□□□□ -0.35
SMAD9-202ENST00000379826 RBM26Q5T8P6 1007 aaKnown RBP12.84□□□□□ -0.35
SMAD9-202ENST00000379826 NYAP1Q6ZVC0 841 aa12.84□□□□□ -0.35
SMAD9-202ENST00000379826 BCCIPQ9P287 314 aaKnown RBP eCLIP12.84□□□□□ -0.35
SMAD9-202ENST00000379826 PCDHB6Q9Y5E3 794 aa12.84□□□□□ -0.35
SMAD9-202ENST00000379826 GNPATO15228 680 aa12.83□□□□□ -0.35
SMAD9-202ENST00000379826 PUM3Q15397 648 aaKnown RBP12.83□□□□□ -0.35
SMAD9-202ENST00000379826 WWC2Q6AWC2 1192 aa12.83□□□□□ -0.35
SMAD9-202ENST00000379826 SYMPKQ92797 1274 aaKnown RBP12.83□□□□□ -0.35
SMAD9-202ENST00000379826 FDPSP14324 419 aaKnown RBP12.83□□□□□ -0.36
SMAD9-202ENST00000379826 CDC27P30260 824 aa12.83□□□□□ -0.36
SMAD9-202ENST00000379826 PAK1Q13153 545 aa12.83□□□□□ -0.36
SMAD9-202ENST00000379826 RNF187Q5TA31 235 aaPredicted RBP12.83□□□□□ -0.36
SMAD9-202ENST00000379826 DNAJC10Q8IXB1 793 aa12.83□□□□□ -0.36
SMAD9-202ENST00000379826 MICALL1Q8N3F8 863 aa12.83□□□□□ -0.36
SMAD9-202ENST00000379826 TEX13AQ9BXU3 409 aaPredicted RBP12.83□□□□□ -0.36
SMAD9-202ENST00000379826 LUC7L2Q9Y383 392 aaKnown RBP12.83□□□□□ -0.36
SMAD9-202ENST00000379826 NEDD4P46934 1319 aa12.83□□□□□ -0.36
SMAD9-202ENST00000379826 ADAMTS13Q76LX8 1427 aa12.83□□□□□ -0.36
SMAD9-202ENST00000379826 DIP2AQ14689 1571 aa12.83□□□□□ -0.36
SMAD9-202ENST00000379826 PRKAB2O43741 272 aa12.83□□□□□ -0.36
SMAD9-202ENST00000379826 TTC38Q5R3I4 469 aa12.83□□□□□ -0.36
SMAD9-202ENST00000379826 DZIP1Q86YF9 867 aaKnown RBP12.83□□□□□ -0.36
SMAD9-202ENST00000379826 GPATCH11Q8N954 259 aa12.83□□□□□ -0.36
SMAD9-202ENST00000379826 SDR42E1Q8WUS8 393 aa12.83□□□□□ -0.36
SMAD9-202ENST00000379826 PSMB7Q99436 277 aa12.83□□□□□ -0.36
SMAD9-202ENST00000379826 STX10O60499 249 aa12.83□□□□□ -0.36
SMAD9-202ENST00000379826 IDEP14735 1019 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms