RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 FBXW7Q969H0 707 aa17.16■□□□□ 0.34
PRNP-201ENST00000379440 DDR1Q08345 913 aa17.16■□□□□ 0.34
PRNP-201ENST00000379440 SLC27A3Q5K4L6 730 aa17.16■□□□□ 0.34
PRNP-201ENST00000379440 PROM2Q8N271 834 aa17.16■□□□□ 0.34
PRNP-201ENST00000379440 SPC24Q8NBT2 197 aa17.16■□□□□ 0.34
PRNP-201ENST00000379440 WDR66Q8TBY9 1149 aa17.16■□□□□ 0.34
PRNP-201ENST00000379440 TTC12Q9H892 705 aaPredicted RBP17.16■□□□□ 0.34
PRNP-201ENST00000379440 MCM9Q9NXL9 1143 aa17.16■□□□□ 0.34
PRNP-201ENST00000379440 MROH7-TTC4A0A0A0MT08 1334 aa17.16■□□□□ 0.34
PRNP-201ENST00000379440 ZNF500O60304 480 aaPredicted RBP17.15■□□□□ 0.34
PRNP-201ENST00000379440 UFL1O94874 794 aa17.15■□□□□ 0.34
PRNP-201ENST00000379440 RCAN1P53805 252 aa17.15■□□□□ 0.34
PRNP-201ENST00000379440 NOSTRINQ8IVI9 506 aa17.15■□□□□ 0.34
PRNP-201ENST00000379440 PLEKHA8P1O95397 391 aa17.15■□□□□ 0.34
PRNP-201ENST00000379440 PFKFB1P16118 471 aa17.15■□□□□ 0.34
PRNP-201ENST00000379440 STX1AQ16623 288 aa17.15■□□□□ 0.34
PRNP-201ENST00000379440 ZNF804AQ7Z570 1209 aa17.15■□□□□ 0.34
PRNP-201ENST00000379440 CATIPQ7Z7H3 387 aa17.15■□□□□ 0.34
PRNP-201ENST00000379440 SH3RF3Q8TEJ3 882 aaPredicted RBP17.15■□□□□ 0.34
PRNP-201ENST00000379440 CLIC6Q96NY7 704 aa17.15■□□□□ 0.34
PRNP-201ENST00000379440 CCDC88AQ3V6T2 1871 aa17.15■□□□□ 0.34
PRNP-201ENST00000379440 ZNF202O95125 648 aa17.14■□□□□ 0.34
PRNP-201ENST00000379440 CMA1P23946 247 aa17.14■□□□□ 0.34
PRNP-201ENST00000379440 TROAPQ12815 778 aa17.14■□□□□ 0.34
PRNP-201ENST00000379440 NR5A1Q13285 461 aa17.14■□□□□ 0.34
PRNP-201ENST00000379440 MTERF4Q7Z6M4 381 aaKnown RBP17.14■□□□□ 0.34
PRNP-201ENST00000379440 SHISA4Q96DD7 197 aa17.14■□□□□ 0.34
PRNP-201ENST00000379440 ORC4O43929 436 aa17.14■□□□□ 0.33
PRNP-201ENST00000379440 PCP11498 1178 aaKnown RBP17.14■□□□□ 0.33
PRNP-201ENST00000379440 IQCB1Q15051 598 aa17.14■□□□□ 0.33
PRNP-201ENST00000379440 SAFBQ15424 915 aaKnown RBP eCLIP17.14■□□□□ 0.33
PRNP-201ENST00000379440 OXER1Q8TDS5 423 aa17.14■□□□□ 0.33
PRNP-201ENST00000379440 RBM17Q96I25 401 aaKnown RBP17.14■□□□□ 0.33
PRNP-201ENST00000379440 BCCIPQ9P287 314 aaKnown RBP eCLIP17.14■□□□□ 0.33
PRNP-201ENST00000379440 ARPP21Q9UBL0 812 aaPredicted RBP17.14■□□□□ 0.33
PRNP-201ENST00000379440 TOB1P50616 345 aaPredicted RBP17.14■□□□□ 0.33
PRNP-201ENST00000379440 SBK1Q52WX2 424 aa17.14■□□□□ 0.33
PRNP-201ENST00000379440 SHC4Q6S5L8 630 aa17.14■□□□□ 0.33
PRNP-201ENST00000379440 PPP6R2O75170 966 aa17.13■□□□□ 0.33
PRNP-201ENST00000379440 USP5P45974 858 aa17.13■□□□□ 0.33
PRNP-201ENST00000379440 FUT2Q10981 343 aa17.13■□□□□ 0.33
PRNP-201ENST00000379440 TXNRD1Q16881 649 aa17.13■□□□□ 0.33
PRNP-201ENST00000379440 CD209Q9NNX6 404 aa17.13■□□□□ 0.33
PRNP-201ENST00000379440 POLRMTO00411 1230 aaKnown RBP17.13■□□□□ 0.33
PRNP-201ENST00000379440 PKN1Q16512 942 aa17.13■□□□□ 0.33
PRNP-201ENST00000379440 DYNLL2Q96FJ2 89 aa17.13■□□□□ 0.33
PRNP-201ENST00000379440 RNF26Q9BY78 433 aaPredicted RBP17.13■□□□□ 0.33
PRNP-201ENST00000379440 VPS54Q9P1Q0 977 aa17.13■□□□□ 0.33
PRNP-201ENST00000379440 MKRN1Q9UHC7 482 aaKnown RBP17.13■□□□□ 0.33
PRNP-201ENST00000379440 V9GY48 417 aaPredicted RBP17.13■□□□□ 0.33
PRNP-201ENST00000379440 BRWD3Q6RI45 1802 aa17.12■□□□□ 0.33
PRNP-201ENST00000379440 MAST2Q6P0Q8 1798 aa17.12■□□□□ 0.33
PRNP-201ENST00000379440 ZBTB22O15209 634 aa17.12■□□□□ 0.33
PRNP-201ENST00000379440 GGA1Q9UJY5 639 aa17.12■□□□□ 0.33
PRNP-201ENST00000379440 TSPY2A6NKD2 308 aa17.12■□□□□ 0.33
PRNP-201ENST00000379440 SLC3A2P08195 630 aaKnown RBP17.12■□□□□ 0.33
PRNP-201ENST00000379440 AKAP17AQ02040 695 aaKnown RBP17.12■□□□□ 0.33
PRNP-201ENST00000379440 PPP2R5BQ15173 497 aa17.12■□□□□ 0.33
PRNP-201ENST00000379440 C15orf52Q6ZUT6 534 aaKnown RBP17.12■□□□□ 0.33
PRNP-201ENST00000379440 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.12■□□□□ 0.33
PRNP-201ENST00000379440 TRIM5Q9C035 493 aa17.12■□□□□ 0.33
PRNP-201ENST00000379440 FOXP1Q9H334 677 aaPredicted RBP17.12■□□□□ 0.33
PRNP-201ENST00000379440 FAM13BQ9NYF5 915 aa17.12■□□□□ 0.33
PRNP-201ENST00000379440 KIAA1468Q9P260 1216 aa17.12■□□□□ 0.33
PRNP-201ENST00000379440 POLLQ9UGP5 575 aa17.12■□□□□ 0.33
PRNP-201ENST00000379440 CAVIN2O95810 425 aa17.11■□□□□ 0.33
PRNP-201ENST00000379440 ATP2B1P20020 1258 aa17.11■□□□□ 0.33
PRNP-201ENST00000379440 ATP2B4P23634 1241 aa17.11■□□□□ 0.33
PRNP-201ENST00000379440 PDE4BQ07343 736 aa17.11■□□□□ 0.33
PRNP-201ENST00000379440 JMYQ8N9B5 988 aa17.11■□□□□ 0.33
PRNP-201ENST00000379440 TGFBRAP1Q8WUH2 860 aa17.11■□□□□ 0.33
PRNP-201ENST00000379440 PRDM10Q9NQV6 1147 aa17.11■□□□□ 0.33
PRNP-201ENST00000379440 ANO10Q9NW15 660 aa17.11■□□□□ 0.33
PRNP-201ENST00000379440 KIF20AO95235 890 aa17.11■□□□□ 0.33
PRNP-201ENST00000379440 CDK11BP21127 795 aaKnown RBP17.11■□□□□ 0.33
PRNP-201ENST00000379440 C12orf60Q5U649 245 aa17.11■□□□□ 0.33
PRNP-201ENST00000379440 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.11■□□□□ 0.33
PRNP-201ENST00000379440 KIAA1551Q9HCM1 1747 aa17.1■□□□□ 0.33
PRNP-201ENST00000379440 BBOX1O75936 387 aa17.1■□□□□ 0.33
PRNP-201ENST00000379440 SYKP43405 635 aa17.1■□□□□ 0.33
PRNP-201ENST00000379440 SPECC1Q5M775 1068 aa17.1■□□□□ 0.33
PRNP-201ENST00000379440 TMED8Q6PL24 325 aaPredicted RBP17.1■□□□□ 0.33
PRNP-201ENST00000379440 CABP5Q9NP86 173 aa17.1■□□□□ 0.33
PRNP-201ENST00000379440 PCDHB6Q9Y5E3 794 aa17.1■□□□□ 0.33
PRNP-201ENST00000379440 GOLGA6L19H0YKK7 550 aa17.1■□□□□ 0.33
PRNP-201ENST00000379440 BIN1O00499 593 aa17.1■□□□□ 0.33
PRNP-201ENST00000379440 PRPF3O43395 683 aaKnown RBP17.1■□□□□ 0.33
PRNP-201ENST00000379440 OFD1O75665 1012 aa17.1■□□□□ 0.33
PRNP-201ENST00000379440 ZNF75DP51815 510 aa17.1■□□□□ 0.33
PRNP-201ENST00000379440 DHX40Q8IX18 779 aaKnown RBP17.1■□□□□ 0.33
PRNP-201ENST00000379440 SRBD1Q8N5C6 995 aaKnown RBP17.1■□□□□ 0.33
PRNP-201ENST00000379440 TBC1D16Q8TBP0 767 aa17.1■□□□□ 0.33
PRNP-201ENST00000379440 RBM28Q9NW13 759 aaKnown RBP17.1■□□□□ 0.33
PRNP-201ENST00000379440 HPSEQ9Y251 543 aa17.1■□□□□ 0.33
PRNP-201ENST00000379440 LAMB1P07942 1786 aa17.09■□□□□ 0.33
PRNP-201ENST00000379440 FAM205CA6NFA0 338 aa17.09■□□□□ 0.33
PRNP-201ENST00000379440 DDAH1O94760 285 aa17.09■□□□□ 0.33
PRNP-201ENST00000379440 BAG3O95817 575 aa17.09■□□□□ 0.33
PRNP-201ENST00000379440 CALM1P0DP23 149 aa17.09■□□□□ 0.33
PRNP-201ENST00000379440 CALM2P0DP24 149 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms