RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 PPP2R3BQ9Y5P8 575 aa18.6■□□□□ 0.57
CCDC107-204ENST00000378409 TSPY3P0CV98 308 aa18.59■□□□□ 0.57
CCDC107-204ENST00000378409 TSPY8P0CW00 308 aa18.59■□□□□ 0.57
CCDC107-204ENST00000378409 AK2P54819 239 aa18.59■□□□□ 0.57
CCDC107-204ENST00000378409 TFAP4Q01664 338 aa18.59■□□□□ 0.57
CCDC107-204ENST00000378409 ZKSCAN3Q9BRR0 538 aa18.59■□□□□ 0.57
CCDC107-204ENST00000378409 UBAC1Q9BSL1 405 aa18.59■□□□□ 0.57
CCDC107-204ENST00000378409 NMRK2Q9NPI5 230 aa18.59■□□□□ 0.57
CCDC107-204ENST00000378409 CLEC11AQ9Y240 323 aa18.59■□□□□ 0.57
CCDC107-204ENST00000378409 ADM5C9JUS6 153 aa18.58■□□□□ 0.56
CCDC107-204ENST00000378409 IFIT3O14879 490 aaKnown RBP18.58■□□□□ 0.56
CCDC107-204ENST00000378409 NT5C2P49902 561 aa18.58■□□□□ 0.56
CCDC107-204ENST00000378409 TOB2Q14106 344 aaPredicted RBP18.58■□□□□ 0.56
CCDC107-204ENST00000378409 SART3Q15020 963 aaKnown RBP18.58■□□□□ 0.56
CCDC107-204ENST00000378409 NBPF12Q5TAG4 269 aaPredicted RBP18.58■□□□□ 0.56
CCDC107-204ENST00000378409 PRAMEF18Q5VWM3 479 aa18.58■□□□□ 0.56
CCDC107-204ENST00000378409 MIGA2Q7L4E1 593 aa18.58■□□□□ 0.56
CCDC107-204ENST00000378409 KRT26Q7Z3Y9 468 aa18.58■□□□□ 0.56
CCDC107-204ENST00000378409 IQCA1Q86XH1 822 aa18.58■□□□□ 0.56
CCDC107-204ENST00000378409 HSCBQ8IWL3 235 aa18.58■□□□□ 0.56
CCDC107-204ENST00000378409 SNX21Q969T3 373 aa18.58■□□□□ 0.56
CCDC107-204ENST00000378409 TMEM87BQ96K49 555 aa18.58■□□□□ 0.56
CCDC107-204ENST00000378409 ALDH8A1Q9H2A2 487 aaPredicted RBP18.58■□□□□ 0.56
CCDC107-204ENST00000378409 ERICH2A1L162 156 aa18.57■□□□□ 0.56
CCDC107-204ENST00000378409 TBC1D12O60347 775 aa18.57■□□□□ 0.56
CCDC107-204ENST00000378409 POTEIP0CG38 1075 aa18.57■□□□□ 0.56
CCDC107-204ENST00000378409 POTEJP0CG39 1038 aa18.57■□□□□ 0.56
CCDC107-204ENST00000378409 AKR1B1P15121 316 aa18.57■□□□□ 0.56
CCDC107-204ENST00000378409 BECN1Q14457 450 aa18.57■□□□□ 0.56
CCDC107-204ENST00000378409 ANKRD1Q15327 319 aa18.57■□□□□ 0.56
CCDC107-204ENST00000378409 CERKLQ49MI3 558 aaPredicted RBP18.57■□□□□ 0.56
CCDC107-204ENST00000378409 TMEM67Q5HYA8 995 aa18.57■□□□□ 0.56
CCDC107-204ENST00000378409 TATDN1Q6P1N9 297 aa18.57■□□□□ 0.56
CCDC107-204ENST00000378409 BRF1Q92994 677 aa18.57■□□□□ 0.56
CCDC107-204ENST00000378409 HOOK2Q96ED9 719 aa18.57■□□□□ 0.56
CCDC107-204ENST00000378409 LARP6Q9BRS8 491 aaKnown RBP18.57■□□□□ 0.56
CCDC107-204ENST00000378409 GPHNQ9NQX3 736 aaPredicted RBP18.57■□□□□ 0.56
CCDC107-204ENST00000378409 DOCK1Q14185 1865 aa18.56■□□□□ 0.56
CCDC107-204ENST00000378409 TNKSO95271 1327 aa18.56■□□□□ 0.56
CCDC107-204ENST00000378409 MPHOSPH10O00566 681 aaKnown RBP18.56■□□□□ 0.56
CCDC107-204ENST00000378409 SH2B2O14492 632 aaPredicted RBP18.56■□□□□ 0.56
CCDC107-204ENST00000378409 NMT2O60551 498 aa18.56■□□□□ 0.56
CCDC107-204ENST00000378409 USP48Q86UV5 1035 aa18.56■□□□□ 0.56
CCDC107-204ENST00000378409 CCDC17Q96LX7 622 aa18.56■□□□□ 0.56
CCDC107-204ENST00000378409 ZSCAN10Q96SZ4 725 aaPredicted RBP18.56■□□□□ 0.56
CCDC107-204ENST00000378409 TBC1D2Q9BYX2 928 aa18.56■□□□□ 0.56
CCDC107-204ENST00000378409 ANGEL1Q9UNK9 670 aaKnown RBP18.56■□□□□ 0.56
CCDC107-204ENST00000378409 PLIN4Q96Q06 1357 aa18.55■□□□□ 0.56
CCDC107-204ENST00000378409 GDF11O95390 407 aa18.55■□□□□ 0.56
CCDC107-204ENST00000378409 MCM2P49736 904 aa18.55■□□□□ 0.56
CCDC107-204ENST00000378409 WTAPQ15007 396 aa18.55■□□□□ 0.56
CCDC107-204ENST00000378409 SUPT20HL1Q3ZLR7 823 aa18.55■□□□□ 0.56
CCDC107-204ENST00000378409 DCAF15Q66K64 600 aa18.55■□□□□ 0.56
CCDC107-204ENST00000378409 DLK2Q6UY11 383 aa18.55■□□□□ 0.56
CCDC107-204ENST00000378409 NEDD1Q8NHV4 660 aa18.55■□□□□ 0.56
CCDC107-204ENST00000378409 IGDCC4Q8TDY8 1250 aa18.55■□□□□ 0.56
CCDC107-204ENST00000378409 MTA3Q9BTC8 594 aa18.55■□□□□ 0.56
CCDC107-204ENST00000378409 AGXT2Q9BYV1 514 aa18.55■□□□□ 0.56
CCDC107-204ENST00000378409 SSC5DA1L4H1 1573 aa18.55■□□□□ 0.56
CCDC107-204ENST00000378409 OTOFQ9HC10 1997 aa18.54■□□□□ 0.56
CCDC107-204ENST00000378409 K7ELQ4 463 aaPredicted RBP18.54■□□□□ 0.56
CCDC107-204ENST00000378409 MAP3K10Q02779 954 aa18.54■□□□□ 0.56
CCDC107-204ENST00000378409 APOBRQ0VD83 1088 aa18.54■□□□□ 0.56
CCDC107-204ENST00000378409 ABCB5Q2M3G0 1257 aa18.54■□□□□ 0.56
CCDC107-204ENST00000378409 FBXL16Q8N461 479 aa18.54■□□□□ 0.56
CCDC107-204ENST00000378409 ENAHQ8N8S7 591 aaPredicted RBP18.54■□□□□ 0.56
CCDC107-204ENST00000378409 GLIS2Q9BZE0 524 aaPredicted RBP18.54■□□□□ 0.56
CCDC107-204ENST00000378409 LY9Q9HBG7 655 aa18.54■□□□□ 0.56
CCDC107-204ENST00000378409 IL17RBQ9NRM6 502 aa18.54■□□□□ 0.56
CCDC107-204ENST00000378409 NAP1L2Q9ULW6 460 aaPredicted RBP18.54■□□□□ 0.56
CCDC107-204ENST00000378409 RRP1BQ14684 758 aaKnown RBP18.53■□□□□ 0.56
CCDC107-204ENST00000378409 SEC23AQ15436 765 aa18.53■□□□□ 0.56
CCDC107-204ENST00000378409 CCDC178Q5BJE1 867 aa18.53■□□□□ 0.56
CCDC107-204ENST00000378409 MAP1SQ66K74 1059 aaPredicted RBP18.53■□□□□ 0.56
CCDC107-204ENST00000378409 NFXL1Q6ZNB6 911 aa18.53■□□□□ 0.56
CCDC107-204ENST00000378409 CDC37L1Q7L3B6 337 aa18.53■□□□□ 0.56
CCDC107-204ENST00000378409 LDHDQ86WU2 507 aa18.53■□□□□ 0.56
CCDC107-204ENST00000378409 CDCA5Q96FF9 252 aa18.53■□□□□ 0.56
CCDC107-204ENST00000378409 ZNF341Q9BYN7 854 aa18.53■□□□□ 0.56
CCDC107-204ENST00000378409 SENP2Q9HC62 589 aa18.53■□□□□ 0.56
CCDC107-204ENST00000378409 TCP11L1Q9NUJ3 509 aa18.53■□□□□ 0.56
CCDC107-204ENST00000378409 LIMCH1Q9UPQ0 1083 aa18.53■□□□□ 0.56
CCDC107-204ENST00000378409 KLF18A0A0U1RQI7 1052 aa18.52■□□□□ 0.56
CCDC107-204ENST00000378409 CCDC69A6NI79 296 aa18.52■□□□□ 0.56
CCDC107-204ENST00000378409 LIFRP42702 1097 aa18.52■□□□□ 0.56
CCDC107-204ENST00000378409 SHROOM1Q2M3G4 852 aaPredicted RBP18.52■□□□□ 0.56
CCDC107-204ENST00000378409 IFIT1BQ5T764 474 aaKnown RBP18.52■□□□□ 0.56
CCDC107-204ENST00000378409 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.52■□□□□ 0.56
CCDC107-204ENST00000378409 CABP5Q9NP86 173 aa18.52■□□□□ 0.56
CCDC107-204ENST00000378409 TPCN1Q9ULQ1 816 aa18.52■□□□□ 0.56
CCDC107-204ENST00000378409 PAPPA2Q9BXP8 1791 aa18.51■□□□□ 0.55
CCDC107-204ENST00000378409 LARGE1O95461 756 aa18.51■□□□□ 0.55
CCDC107-204ENST00000378409 GH2P01242 217 aa18.51■□□□□ 0.55
CCDC107-204ENST00000378409 TMEM179Q6ZVK1 233 aa18.51■□□□□ 0.55
CCDC107-204ENST00000378409 CEP95Q96GE4 821 aa18.51■□□□□ 0.55
CCDC107-204ENST00000378409 TMX3Q96JJ7 454 aa18.51■□□□□ 0.55
CCDC107-204ENST00000378409 BRPF3Q9ULD4 1205 aa18.51■□□□□ 0.55
CCDC107-204ENST00000378409 STX8Q9UNK0 236 aa18.51■□□□□ 0.55
CCDC107-204ENST00000378409 FZD1Q9UP38 647 aa18.51■□□□□ 0.55
CCDC107-204ENST00000378409 TRPM7Q96QT4 1865 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms