RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 COL22A1Q8NFW1 1626 aaPredicted RBP20.83■□□□□ 0.92
TDP2-202ENST00000378198 ZNF804BA4D1E1 1349 aa20.82■□□□□ 0.92
TDP2-202ENST00000378198 TNKSO95271 1327 aa20.82■□□□□ 0.92
TDP2-202ENST00000378198 AKAP17AQ02040 695 aaKnown RBP20.82■□□□□ 0.92
TDP2-202ENST00000378198 CCDC93Q567U6 631 aa20.82■□□□□ 0.92
TDP2-202ENST00000378198 HOMER1Q86YM7 354 aa20.82■□□□□ 0.92
TDP2-202ENST00000378198 CMTR1Q8N1G2 835 aaKnown RBP20.82■□□□□ 0.92
TDP2-202ENST00000378198 GNL3LQ9NVN8 582 aaKnown RBP20.82■□□□□ 0.92
TDP2-202ENST00000378198 CASZ1Q86V15 1759 aa20.82■□□□□ 0.92
TDP2-202ENST00000378198 PHLPP2Q6ZVD8 1323 aa20.82■□□□□ 0.92
TDP2-202ENST00000378198 MINDY4BA8MYZ0 360 aa20.82■□□□□ 0.92
TDP2-202ENST00000378198 ETF1P62495 437 aaKnown RBP20.82■□□□□ 0.92
TDP2-202ENST00000378198 MORC3Q14149 939 aa20.82■□□□□ 0.92
TDP2-202ENST00000378198 PRDM4Q9UKN5 801 aa20.82■□□□□ 0.92
TDP2-202ENST00000378198 DUOX1Q9NRD9 1551 aa20.82■□□□□ 0.92
TDP2-202ENST00000378198 BAZ2AQ9UIF9 1905 aaKnown RBP20.82■□□□□ 0.92
TDP2-202ENST00000378198 CACNA1SQ13698 1873 aa20.82■□□□□ 0.92
TDP2-202ENST00000378198 TMEM232C9JQI7 657 aa20.81■□□□□ 0.92
TDP2-202ENST00000378198 CABP5Q9NP86 173 aa20.81■□□□□ 0.92
TDP2-202ENST00000378198 PRR29P0C7W0 189 aa20.81■□□□□ 0.92
TDP2-202ENST00000378198 ADGRA1Q86SQ6 560 aa20.81■□□□□ 0.92
TDP2-202ENST00000378198 OXER1Q8TDS5 423 aa20.81■□□□□ 0.92
TDP2-202ENST00000378198 SDR42E1Q8WUS8 393 aa20.81■□□□□ 0.92
TDP2-202ENST00000378198 CCDC34Q96HJ3 373 aa20.81■□□□□ 0.92
TDP2-202ENST00000378198 RAI14Q9P0K7 980 aa20.81■□□□□ 0.92
TDP2-202ENST00000378198 ZSCAN12O43309 604 aa20.8■□□□□ 0.92
TDP2-202ENST00000378198 ACTN4O43707 911 aaKnown RBP20.8■□□□□ 0.92
TDP2-202ENST00000378198 TBX2Q13207 712 aaPredicted RBP20.8■□□□□ 0.92
TDP2-202ENST00000378198 ELF2Q15723 593 aa20.8■□□□□ 0.92
TDP2-202ENST00000378198 KMT5BQ4FZB7 885 aa20.8■□□□□ 0.92
TDP2-202ENST00000378198 ABCF2Q9UG63 623 aa20.8■□□□□ 0.92
TDP2-202ENST00000378198 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.8■□□□□ 0.92
TDP2-202ENST00000378198 NFE2L3Q9Y4A8 694 aa20.8■□□□□ 0.92
TDP2-202ENST00000378198 V9GYY5 206 aaPredicted RBP20.8■□□□□ 0.92
TDP2-202ENST00000378198 LOC102724428A0A0B4J2F2 783 aa20.79■□□□□ 0.92
TDP2-202ENST00000378198 ARHGAP6O43182 974 aa20.79■□□□□ 0.92
TDP2-202ENST00000378198 PRPF3O43395 683 aaKnown RBP20.79■□□□□ 0.92
TDP2-202ENST00000378198 ZNF18P17022 549 aa20.79■□□□□ 0.92
TDP2-202ENST00000378198 CDK11BP21127 795 aaKnown RBP20.79■□□□□ 0.92
TDP2-202ENST00000378198 SIK1P57059 783 aa20.79■□□□□ 0.92
TDP2-202ENST00000378198 CT47A1Q5JQC4 288 aaPredicted RBP20.79■□□□□ 0.92
TDP2-202ENST00000378198 PKNOX2Q96KN3 472 aa20.79■□□□□ 0.92
TDP2-202ENST00000378198 CSRNP2Q9H175 543 aa20.79■□□□□ 0.92
TDP2-202ENST00000378198 INTS13Q9NVM9 706 aa20.79■□□□□ 0.92
TDP2-202ENST00000378198 AATFQ9NY61 560 aaKnown RBP eCLIP20.79■□□□□ 0.92
TDP2-202ENST00000378198 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.79■□□□□ 0.922e-6■■■■□ 19.4
TDP2-202ENST00000378198 PCP11498 1178 aaKnown RBP20.79■□□□□ 0.92
TDP2-202ENST00000378198 UBE4AQ14139 1066 aa20.79■□□□□ 0.92
TDP2-202ENST00000378198 SPATA20Q8TB22 786 aa20.79■□□□□ 0.92
TDP2-202ENST00000378198 ZSCAN10Q96SZ4 725 aaPredicted RBP20.79■□□□□ 0.92
TDP2-202ENST00000378198 RIOK1Q9BRS2 568 aaKnown RBP20.79■□□□□ 0.92
TDP2-202ENST00000378198 BCL11BQ9C0K0 894 aaPredicted RBP20.79■□□□□ 0.92
TDP2-202ENST00000378198 RBM28Q9NW13 759 aaKnown RBP20.79■□□□□ 0.92
TDP2-202ENST00000378198 TRIM75PA6NK02 468 aa20.78■□□□□ 0.92
TDP2-202ENST00000378198 ATP2B1P20020 1258 aa20.78■□□□□ 0.92
TDP2-202ENST00000378198 ERCC5P28715 1186 aaPredicted RBP20.78■□□□□ 0.92
TDP2-202ENST00000378198 KRT2P35908 639 aa20.78■□□□□ 0.92
TDP2-202ENST00000378198 TMEM139Q8IV31 216 aa20.78■□□□□ 0.92
TDP2-202ENST00000378198 NUTM2AQ8IVF1 878 aaPredicted RBP20.78■□□□□ 0.92
TDP2-202ENST00000378198 REXO1L1PQ8IX06 675 aa20.78■□□□□ 0.92
TDP2-202ENST00000378198 PHF20Q9BVI0 1012 aa20.78■□□□□ 0.92
TDP2-202ENST00000378198 BRIP1Q9BX63 1249 aa20.78■□□□□ 0.92
TDP2-202ENST00000378198 IQSEC3Q9UPP2 1182 aaPredicted RBP20.78■□□□□ 0.92
TDP2-202ENST00000378198 ZNF652Q9Y2D9 606 aa20.78■□□□□ 0.92
TDP2-202ENST00000378198 SCN7AQ01118 1682 aa20.78■□□□□ 0.92
TDP2-202ENST00000378198 BMP15O95972 392 aa20.77■□□□□ 0.92
TDP2-202ENST00000378198 CALM1P0DP23 149 aa20.77■□□□□ 0.92
TDP2-202ENST00000378198 CALM2P0DP24 149 aa20.77■□□□□ 0.92
TDP2-202ENST00000378198 CALM3P0DP25 149 aa20.77■□□□□ 0.92
TDP2-202ENST00000378198 FMR1Q06787 632 aaKnown RBP eCLIP20.77■□□□□ 0.92
TDP2-202ENST00000378198 PKN1Q16512 942 aa20.77■□□□□ 0.92
TDP2-202ENST00000378198 DDB1Q16531 1140 aa20.77■□□□□ 0.92
TDP2-202ENST00000378198 TRIM65Q6PJ69 517 aa20.77■□□□□ 0.92
TDP2-202ENST00000378198 CATIPQ7Z7H3 387 aa20.77■□□□□ 0.92
TDP2-202ENST00000378198 ANKRD18AQ8IVF6 992 aa20.77■□□□□ 0.92
TDP2-202ENST00000378198 ENAHQ8N8S7 591 aaPredicted RBP20.77■□□□□ 0.92
TDP2-202ENST00000378198 DNAI1Q9UI46 699 aa20.77■□□□□ 0.92
TDP2-202ENST00000378198 MYH13Q9UKX3 1938 aa20.77■□□□□ 0.92
TDP2-202ENST00000378198 COL4A1P02462 1669 aa20.77■□□□□ 0.92
TDP2-202ENST00000378198 GYG1P46976 350 aa20.77■□□□□ 0.92
TDP2-202ENST00000378198 PLCD1P51178 756 aa20.77■□□□□ 0.92
TDP2-202ENST00000378198 ITPK1Q13572 414 aa20.77■□□□□ 0.92
TDP2-202ENST00000378198 SPECC1LQ69YQ0 1117 aa20.77■□□□□ 0.92
TDP2-202ENST00000378198 FBXO38Q6PIJ6 1188 aa20.77■□□□□ 0.92
TDP2-202ENST00000378198 PDILTQ8N807 584 aa20.77■□□□□ 0.92
TDP2-202ENST00000378198 A0A0G2JS52 829 aa20.76■□□□□ 0.91
TDP2-202ENST00000378198 GOLGA6L9A6NEM1 432 aa20.76■□□□□ 0.91
TDP2-202ENST00000378198 STX10O60499 249 aa20.76■□□□□ 0.91
TDP2-202ENST00000378198 CAVIN4Q5BKX8 364 aa20.76■□□□□ 0.91
TDP2-202ENST00000378198 IFIT1BQ5T764 474 aaKnown RBP20.76■□□□□ 0.91
TDP2-202ENST00000378198 IQCA1Q86XH1 822 aa20.76■□□□□ 0.91
TDP2-202ENST00000378198 BAG1Q99933 345 aaPredicted RBP20.76■□□□□ 0.91
TDP2-202ENST00000378198 SRRTQ9BXP5 876 aaKnown RBP20.76■□□□□ 0.91
TDP2-202ENST00000378198 VPS54Q9P1Q0 977 aa20.76■□□□□ 0.91
TDP2-202ENST00000378198 THRAP3Q9Y2W1 955 aaKnown RBP20.76■□□□□ 0.91
TDP2-202ENST00000378198 TAF1P21675 1872 aa20.76■□□□□ 0.91
TDP2-202ENST00000378198 COL5A3P25940 1745 aaPredicted RBP20.76■□□□□ 0.91
TDP2-202ENST00000378198 FGRP09769 529 aa20.76■□□□□ 0.91
TDP2-202ENST00000378198 FUT2Q10981 343 aa20.76■□□□□ 0.91
TDP2-202ENST00000378198 GRAMD1CQ8IYS0 662 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms