RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 ZBED2Q9BTP6 218 aa12.14□□□□□ -0.47
HIF3A-205ENST00000377670 VPS18Q9P253 973 aa12.14□□□□□ -0.47
HIF3A-205ENST00000377670 SMTNP53814 917 aa12.14□□□□□ -0.47
HIF3A-205ENST00000377670 SIRT2Q8IXJ6 389 aa12.14□□□□□ -0.47
HIF3A-205ENST00000377670 ABI1Q8IZP0 508 aa12.14□□□□□ -0.47
HIF3A-205ENST00000377670 TGFBRAP1Q8WUH2 860 aa12.14□□□□□ -0.47
HIF3A-205ENST00000377670 LPIN2Q92539 896 aa12.14□□□□□ -0.47
HIF3A-205ENST00000377670 DNAJC25Q9H1X3 360 aa12.14□□□□□ -0.47
HIF3A-205ENST00000377670 OGFRQ9NZT2 677 aa12.14□□□□□ -0.47
HIF3A-205ENST00000377670 CEP83Q9Y592 693 aa12.14□□□□□ -0.47
HIF3A-205ENST00000377670 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.14□□□□□ -0.47
HIF3A-205ENST00000377670 NLRX1Q86UT6 975 aa12.14□□□□□ -0.47
HIF3A-205ENST00000377670 GYG1P46976 350 aa12.14□□□□□ -0.47
HIF3A-205ENST00000377670 PRPF4BQ13523 1007 aaKnown RBP12.14□□□□□ -0.47
HIF3A-205ENST00000377670 ELMSAN1Q6PJG2 1045 aa12.14□□□□□ -0.47
HIF3A-205ENST00000377670 PLIN2Q99541 437 aa12.14□□□□□ -0.47
HIF3A-205ENST00000377670 GREM2Q9H772 168 aa12.14□□□□□ -0.47
HIF3A-205ENST00000377670 GLI2P10070 1586 aa12.13□□□□□ -0.47
HIF3A-205ENST00000377670 UIMC1Q96RL1 719 aa12.13□□□□□ -0.47
HIF3A-205ENST00000377670 GLT8D2Q9H1C3 349 aa12.13□□□□□ -0.47
HIF3A-205ENST00000377670 CCDC169A6NNP5 214 aa12.13□□□□□ -0.47
HIF3A-205ENST00000377670 RAD17O75943 681 aa12.13□□□□□ -0.47
HIF3A-205ENST00000377670 KBTBD3Q8NAB2 608 aa12.13□□□□□ -0.47
HIF3A-205ENST00000377670 ALKQ9UM73 1620 aa12.13□□□□□ -0.47
HIF3A-205ENST00000377670 CLRN2A0PK11 232 aa12.13□□□□□ -0.47
HIF3A-205ENST00000377670 ZNF853P0CG23 659 aa12.13□□□□□ -0.47
HIF3A-205ENST00000377670 PTGS1P23219 599 aa12.13□□□□□ -0.47
HIF3A-205ENST00000377670 USH1GQ495M9 461 aa12.13□□□□□ -0.47
HIF3A-205ENST00000377670 ZNF532Q9HCE3 1301 aa12.13□□□□□ -0.47
HIF3A-205ENST00000377670 RPS6KB1P23443 525 aa12.13□□□□□ -0.47
HIF3A-205ENST00000377670 RSPH3Q86UC2 560 aa12.13□□□□□ -0.47
HIF3A-205ENST00000377670 AOPEPQ8N6M6 819 aa12.13□□□□□ -0.47
HIF3A-205ENST00000377670 TRPC6Q9Y210 931 aa12.13□□□□□ -0.47
HIF3A-205ENST00000377670 ADORA1P30542 326 aa12.13□□□□□ -0.47
HIF3A-205ENST00000377670 BCAMP50895 628 aa12.13□□□□□ -0.47
HIF3A-205ENST00000377670 HS1BP3Q53T59 392 aa12.13□□□□□ -0.47
HIF3A-205ENST00000377670 KANK3Q6NY19 840 aa12.13□□□□□ -0.47
HIF3A-205ENST00000377670 RBM28Q9NW13 759 aaKnown RBP12.13□□□□□ -0.47
HIF3A-205ENST00000377670 KDRP35968 1356 aa12.12□□□□□ -0.47
HIF3A-205ENST00000377670 ARL1P40616 181 aaPredicted RBP12.12□□□□□ -0.47
HIF3A-205ENST00000377670 SYKP43405 635 aa12.12□□□□□ -0.47
HIF3A-205ENST00000377670 PDE4DQ08499 809 aa12.12□□□□□ -0.47
HIF3A-205ENST00000377670 FNBP1Q96RU3 617 aa12.12□□□□□ -0.47
HIF3A-205ENST00000377670 RMND1Q9NWS8 449 aa12.12□□□□□ -0.47
HIF3A-205ENST00000377670 JCADQ9P266 1359 aa12.12□□□□□ -0.47
HIF3A-205ENST00000377670 JAK2O60674 1132 aa12.12□□□□□ -0.47
HIF3A-205ENST00000377670 CTSWP56202 376 aa12.12□□□□□ -0.47
HIF3A-205ENST00000377670 CEP57Q86XR8 500 aa12.12□□□□□ -0.47
HIF3A-205ENST00000377670 PROCA1Q8NCQ7 364 aaPredicted RBP12.12□□□□□ -0.47
HIF3A-205ENST00000377670 ATRIPQ8WXE1 791 aa12.12□□□□□ -0.47
HIF3A-205ENST00000377670 UNC13BO14795 1591 aa12.12□□□□□ -0.47
HIF3A-205ENST00000377670 CROCC2H7BZ55 1655 aa12.12□□□□□ -0.47
HIF3A-205ENST00000377670 CLASP1Q7Z460 1538 aa12.12□□□□□ -0.47
HIF3A-205ENST00000377670 DDX39AO00148 427 aaKnown RBP12.12□□□□□ -0.47
HIF3A-205ENST00000377670 CSPG5O95196 566 aa12.12□□□□□ -0.47
HIF3A-205ENST00000377670 CFBP00751 764 aa12.12□□□□□ -0.47
HIF3A-205ENST00000377670 ZSCAN16Q9H4T2 348 aaPredicted RBP12.12□□□□□ -0.47
HIF3A-205ENST00000377670 CKAP4Q07065 602 aaKnown RBP12.12□□□□□ -0.47
HIF3A-205ENST00000377670 ARHGEF16Q5VV41 709 aa12.12□□□□□ -0.47
HIF3A-205ENST00000377670 GTF3C6Q969F1 213 aa12.12□□□□□ -0.47
HIF3A-205ENST00000377670 CYP27B1O15528 508 aa12.11□□□□□ -0.47
HIF3A-205ENST00000377670 ARID5AQ03989 594 aa12.11□□□□□ -0.47
HIF3A-205ENST00000377670 SPATA5Q8NB90 893 aa12.11□□□□□ -0.47
HIF3A-205ENST00000377670 PHKBQ93100 1093 aa12.11□□□□□ -0.47
HIF3A-205ENST00000377670 HELLSQ9NRZ9 838 aa12.11□□□□□ -0.47
HIF3A-205ENST00000377670 CCDC102BQ68D86 513 aa12.11□□□□□ -0.47
HIF3A-205ENST00000377670 CMTR1Q8N1G2 835 aaKnown RBP12.11□□□□□ -0.47
HIF3A-205ENST00000377670 GJD4Q96KN9 370 aaPredicted RBP12.11□□□□□ -0.47
HIF3A-205ENST00000377670 FLOT1O75955 427 aa12.11□□□□□ -0.47
HIF3A-205ENST00000377670 ALAS1P13196 640 aa12.11□□□□□ -0.47
HIF3A-205ENST00000377670 ASIC1P78348 528 aa12.11□□□□□ -0.47
HIF3A-205ENST00000377670 METTL13Q8N6R0 699 aa12.11□□□□□ -0.47
HIF3A-205ENST00000377670 WDR17Q8IZU2 1322 aa12.11□□□□□ -0.47
HIF3A-205ENST00000377670 PI16Q6UXB8 463 aa12.11□□□□□ -0.47
HIF3A-205ENST00000377670 EHBP1Q8NDI1 1231 aa12.11□□□□□ -0.47
HIF3A-205ENST00000377670 APPBP2Q92624 585 aa12.11□□□□□ -0.47
HIF3A-205ENST00000377670 PNMA2Q9UL42 364 aa12.11□□□□□ -0.47
HIF3A-205ENST00000377670 N4BP3O15049 544 aa12.11□□□□□ -0.47
HIF3A-205ENST00000377670 BIRC3Q13489 604 aa12.11□□□□□ -0.47
HIF3A-205ENST00000377670 PKP1Q13835 747 aa12.11□□□□□ -0.47
HIF3A-205ENST00000377670 TRIM47Q96LD4 638 aa12.11□□□□□ -0.47
HIF3A-205ENST00000377670 ARHGAP31Q2M1Z3 1444 aa12.11□□□□□ -0.47
HIF3A-205ENST00000377670 NPR1P16066 1061 aa12.1□□□□□ -0.47
HIF3A-205ENST00000377670 PIGBQ92521 554 aa12.1□□□□□ -0.47
HIF3A-205ENST00000377670 RASSF4Q9H2L5 321 aa12.1□□□□□ -0.47
HIF3A-205ENST00000377670 DBNDD1Q9H9R9 158 aa12.1□□□□□ -0.47
HIF3A-205ENST00000377670 SEC31BQ9NQW1 1179 aa12.1□□□□□ -0.47
HIF3A-205ENST00000377670 C21orf2O43822 256 aa12.1□□□□□ -0.47
HIF3A-205ENST00000377670 STAMBPO95630 424 aa12.1□□□□□ -0.47
HIF3A-205ENST00000377670 KRT2P35908 639 aa12.1□□□□□ -0.47
HIF3A-205ENST00000377670 TRPC3Q13507 836 aa12.1□□□□□ -0.47
HIF3A-205ENST00000377670 PNMA3Q9UL41 463 aa12.1□□□□□ -0.47
HIF3A-205ENST00000377670 SYT10Q6XYQ8 523 aa12.1□□□□□ -0.47
HIF3A-205ENST00000377670 DHX58Q96C10 678 aa12.1□□□□□ -0.47
HIF3A-205ENST00000377670 NOC2LQ9Y3T9 749 aaKnown RBP12.1□□□□□ -0.47
HIF3A-205ENST00000377670 MCM7P33993 719 aa12.1□□□□□ -0.47
HIF3A-205ENST00000377670 KRBA2Q6ZNG9 492 aa12.1□□□□□ -0.47
HIF3A-205ENST00000377670 ABCA6Q8N139 1617 aa12.1□□□□□ -0.47
HIF3A-205ENST00000377670 A0A1B0GVL5 298 aa12.09□□□□□ -0.47
HIF3A-205ENST00000377670 BBOX1O75936 387 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms