RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 SLC26A6Q9BXS9 759 aa17.4■□□□□ 0.38
MSH5-203ENST00000375750 PHLPP2Q6ZVD8 1323 aa17.4■□□□□ 0.38
MSH5-203ENST00000375750 RFC4P35249 363 aa17.4■□□□□ 0.38
MSH5-203ENST00000375750 CTDSPL2Q05D32 466 aa17.4■□□□□ 0.38
MSH5-203ENST00000375750 TRDNQ13061 729 aa17.4■□□□□ 0.38
MSH5-203ENST00000375750 TEX35Q5T0J7 233 aa17.4■□□□□ 0.38
MSH5-203ENST00000375750 TMCO3Q6UWJ1 677 aa17.4■□□□□ 0.38
MSH5-203ENST00000375750 OLFM4Q6UX06 510 aa17.4■□□□□ 0.38
MSH5-203ENST00000375750 NBPF5PQ86XG9 351 aaPredicted RBP17.4■□□□□ 0.38
MSH5-203ENST00000375750 ZKSCAN3Q9BRR0 538 aa17.4■□□□□ 0.38
MSH5-203ENST00000375750 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.4■□□□□ 0.38
MSH5-203ENST00000375750 COL4A1P02462 1669 aa17.39■□□□□ 0.37
MSH5-203ENST00000375750 ABCC12Q96J65 1359 aa17.39■□□□□ 0.37
MSH5-203ENST00000375750 BTBD18B2RXH4 712 aa17.39■□□□□ 0.37
MSH5-203ENST00000375750 GYS2P54840 703 aa17.39■□□□□ 0.37
MSH5-203ENST00000375750 WTIPA6NIX2 430 aaPredicted RBP17.39■□□□□ 0.37
MSH5-203ENST00000375750 KCNJ6P48051 423 aa17.39■□□□□ 0.37
MSH5-203ENST00000375750 CHRNDQ07001 517 aa17.39■□□□□ 0.37
MSH5-203ENST00000375750 USP49Q70CQ1 688 aa17.39■□□□□ 0.37
MSH5-203ENST00000375750 NEK11Q8NG66 645 aa17.39■□□□□ 0.37
MSH5-203ENST00000375750 TIGD1Q96MW7 591 aa17.39■□□□□ 0.37
MSH5-203ENST00000375750 MED15Q96RN5 788 aa17.39■□□□□ 0.37
MSH5-203ENST00000375750 WWC3Q9ULE0 1092 aa17.39■□□□□ 0.37
MSH5-203ENST00000375750 ST5P78524 1137 aa17.38■□□□□ 0.37
MSH5-203ENST00000375750 NTRK3Q16288 839 aa17.38■□□□□ 0.37
MSH5-203ENST00000375750 SAMSN1Q9NSI8 373 aaKnown RBP17.38■□□□□ 0.37
MSH5-203ENST00000375750 MAN1B1Q9UKM7 699 aa17.38■□□□□ 0.37
MSH5-203ENST00000375750 GOLGA8AA7E2F4 631 aa17.38■□□□□ 0.37
MSH5-203ENST00000375750 COBLO75128 1261 aa17.38■□□□□ 0.37
MSH5-203ENST00000375750 ZFYP08048 801 aaPredicted RBP17.38■□□□□ 0.37
MSH5-203ENST00000375750 IARSP41252 1262 aaKnown RBP17.38■□□□□ 0.37
MSH5-203ENST00000375750 SF3B3Q15393 1217 aaKnown RBP17.38■□□□□ 0.37
MSH5-203ENST00000375750 CHMP4CQ96CF2 233 aa17.38■□□□□ 0.37
MSH5-203ENST00000375750 BAG1Q99933 345 aaPredicted RBP17.38■□□□□ 0.37
MSH5-203ENST00000375750 SERTAD1Q9UHV2 236 aa17.38■□□□□ 0.37
MSH5-203ENST00000375750 C4AP0C0L4 1744 aa17.37■□□□□ 0.37
MSH5-203ENST00000375750 C4BP0C0L5 1744 aa17.37■□□□□ 0.37
MSH5-203ENST00000375750 CBFA2T2O43439 604 aa17.37■□□□□ 0.37
MSH5-203ENST00000375750 PPP6R2O75170 966 aa17.37■□□□□ 0.37
MSH5-203ENST00000375750 CDK11BP21127 795 aaKnown RBP17.37■□□□□ 0.37
MSH5-203ENST00000375750 CASP1P29466 404 aa17.37■□□□□ 0.37
MSH5-203ENST00000375750 TOB1P50616 345 aaPredicted RBP17.37■□□□□ 0.37
MSH5-203ENST00000375750 TC2NQ8N9U0 490 aa17.37■□□□□ 0.37
MSH5-203ENST00000375750 NFE2L3Q9Y4A8 694 aa17.37■□□□□ 0.37
MSH5-203ENST00000375750 ZNF532Q9HCE3 1301 aa17.37■□□□□ 0.37
MSH5-203ENST00000375750 RTL9Q8NET4 1388 aa17.37■□□□□ 0.37
MSH5-203ENST00000375750 POLR2DO15514 142 aaKnown RBP17.37■□□□□ 0.37
MSH5-203ENST00000375750 ZBTB43O43298 467 aa17.37■□□□□ 0.37
MSH5-203ENST00000375750 SLC5A1P13866 664 aa17.37■□□□□ 0.37
MSH5-203ENST00000375750 ADD2P35612 726 aa17.37■□□□□ 0.37
MSH5-203ENST00000375750 MDM2Q00987 491 aaPredicted RBP17.37■□□□□ 0.37
MSH5-203ENST00000375750 IGDCC4Q8TDY8 1250 aa17.37■□□□□ 0.37
MSH5-203ENST00000375750 CELF1Q92879 486 aaKnown RBP17.37■□□□□ 0.37
MSH5-203ENST00000375750 CDC5LQ99459 802 aaKnown RBP17.37■□□□□ 0.37
MSH5-203ENST00000375750 LY75O60449 1722 aa17.36■□□□□ 0.37
MSH5-203ENST00000375750 TFRCP02786 760 aaKnown RBP17.36■□□□□ 0.37
MSH5-203ENST00000375750 CASQ1P31415 396 aa17.36■□□□□ 0.37
MSH5-203ENST00000375750 BCAMP50895 628 aa17.36■□□□□ 0.37
MSH5-203ENST00000375750 LRRFIP1Q32MZ4 808 aaKnown RBP17.36■□□□□ 0.37
MSH5-203ENST00000375750 TMEM67Q5HYA8 995 aa17.36■□□□□ 0.37
MSH5-203ENST00000375750 SLC10A5Q5PT55 438 aa17.36■□□□□ 0.37
MSH5-203ENST00000375750 CPLX3Q8WVH0 158 aa17.36■□□□□ 0.37
MSH5-203ENST00000375750 LY9Q9HBG7 655 aa17.36■□□□□ 0.37
MSH5-203ENST00000375750 LRP5O75197 1615 aa17.36■□□□□ 0.37
MSH5-203ENST00000375750 CYP2C19P33261 490 aa17.36■□□□□ 0.37
MSH5-203ENST00000375750 NR5A1Q13285 461 aa17.36■□□□□ 0.37
MSH5-203ENST00000375750 RRP12Q5JTH9 1297 aaKnown RBP17.36■□□□□ 0.37
MSH5-203ENST00000375750 TPTE2Q6XPS3 522 aa17.36■□□□□ 0.37
MSH5-203ENST00000375750 ANKRD18AQ8IVF6 992 aa17.36■□□□□ 0.37
MSH5-203ENST00000375750 DHX58Q96C10 678 aa17.36■□□□□ 0.37
MSH5-203ENST00000375750 ZNF512BQ96KM6 892 aaPredicted RBP17.36■□□□□ 0.37
MSH5-203ENST00000375750 NYXQ9GZU5 481 aa17.36■□□□□ 0.37
MSH5-203ENST00000375750 MRPL44Q9H9J2 332 aaKnown RBP17.36■□□□□ 0.37
MSH5-203ENST00000375750 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.35■□□□□ 0.37
MSH5-203ENST00000375750 TBC1D8O95759 1140 aa17.35■□□□□ 0.37
MSH5-203ENST00000375750 HNRNPH2P55795 449 aaKnown RBP17.35■□□□□ 0.37
MSH5-203ENST00000375750 TAF1LQ8IZX4 1826 aa17.35■□□□□ 0.37
MSH5-203ENST00000375750 TAF1P21675 1872 aa17.35■□□□□ 0.37
MSH5-203ENST00000375750 ARID4AP29374 1257 aaPredicted RBP17.35■□□□□ 0.37
MSH5-203ENST00000375750 TBX2Q13207 712 aaPredicted RBP17.35■□□□□ 0.37
MSH5-203ENST00000375750 MAPK8IP2Q13387 824 aaPredicted RBP17.35■□□□□ 0.37
MSH5-203ENST00000375750 JMYQ8N9B5 988 aa17.35■□□□□ 0.37
MSH5-203ENST00000375750 NLRP3Q96P20 1036 aa17.35■□□□□ 0.37
MSH5-203ENST00000375750 ZSWIM5Q9P217 1185 aa17.35■□□□□ 0.37
MSH5-203ENST00000375750 PCDHB6Q9Y5E3 794 aa17.35■□□□□ 0.37
MSH5-203ENST00000375750 SCN7AQ01118 1682 aa17.35■□□□□ 0.37
MSH5-203ENST00000375750 MYO5AQ9Y4I1 1855 aaKnown RBP17.35■□□□□ 0.37
MSH5-203ENST00000375750 SOWAHDA6NJG2 315 aa17.34■□□□□ 0.37
MSH5-203ENST00000375750 RGL2O15211 777 aa17.34■□□□□ 0.37
MSH5-203ENST00000375750 ARHGAP6O43182 974 aa17.34■□□□□ 0.37
MSH5-203ENST00000375750 TEX33O43247 280 aa17.34■□□□□ 0.37
MSH5-203ENST00000375750 CUTAO60888 179 aa17.34■□□□□ 0.37
MSH5-203ENST00000375750 STX17P56962 302 aa17.34■□□□□ 0.37
MSH5-203ENST00000375750 PPP2R3AQ06190 1150 aa17.34■□□□□ 0.37
MSH5-203ENST00000375750 TRIM29Q14134 588 aa17.34■□□□□ 0.37
MSH5-203ENST00000375750 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.34■□□□□ 0.37
MSH5-203ENST00000375750 EFCAB8A8MWE9 144 aa17.34■□□□□ 0.37
MSH5-203ENST00000375750 KRI1Q8N9T8 703 aaKnown RBP17.34■□□□□ 0.37
MSH5-203ENST00000375750 OXER1Q8TDS5 423 aa17.34■□□□□ 0.37
MSH5-203ENST00000375750 LZTFL1Q9NQ48 299 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms