RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 TAOK2Q9UL54 1235 aa13.16□□□□□ -0.3
HLA-DQA1-202ENST00000374949 AFG3L2Q9Y4W6 797 aa13.16□□□□□ -0.3
HLA-DQA1-202ENST00000374949 FAM196BA6NMK8 535 aa13.15□□□□□ -0.3
HLA-DQA1-202ENST00000374949 BTDP43251 543 aa13.15□□□□□ -0.3
HLA-DQA1-202ENST00000374949 SGPL1O95470 568 aa13.14□□□□□ -0.31
HLA-DQA1-202ENST00000374949 UQCRFS1P1P0C7P4 283 aa13.14□□□□□ -0.31
HLA-DQA1-202ENST00000374949 CHMLP26374 656 aa13.14□□□□□ -0.31
HLA-DQA1-202ENST00000374949 TREML2Q5T2D2 321 aa13.14□□□□□ -0.31
HLA-DQA1-202ENST00000374949 ZGPATQ8N5A5 531 aaKnown RBP13.14□□□□□ -0.31
HLA-DQA1-202ENST00000374949 ANKRD13CQ8N6S4 541 aa13.14□□□□□ -0.31
HLA-DQA1-202ENST00000374949 ZNF512BQ96KM6 892 aaPredicted RBP13.14□□□□□ -0.31
HLA-DQA1-202ENST00000374949 DEFB118Q96PH6 123 aa13.14□□□□□ -0.31
HLA-DQA1-202ENST00000374949 SLC45A1Q9Y2W3 748 aa13.14□□□□□ -0.31
HLA-DQA1-202ENST00000374949 NR2E3Q9Y5X4 410 aa13.14□□□□□ -0.31
HLA-DQA1-202ENST00000374949 MROH7-TTC4A0A0A0MT08 1334 aa13.13□□□□□ -0.31
HLA-DQA1-202ENST00000374949 HIP1O00291 1037 aa13.13□□□□□ -0.31
HLA-DQA1-202ENST00000374949 MFAP1P55081 439 aaKnown RBP13.13□□□□□ -0.31
HLA-DQA1-202ENST00000374949 TICAM2Q86XR7 235 aa13.13□□□□□ -0.31
HLA-DQA1-202ENST00000374949 DNAJC2Q99543 621 aaKnown RBP13.13□□□□□ -0.31
HLA-DQA1-202ENST00000374949 AGTPBP1Q9UPW5 1226 aa13.13□□□□□ -0.31
HLA-DQA1-202ENST00000374949 SIPA1L1O43166 1804 aa13.13□□□□□ -0.31
HLA-DQA1-202ENST00000374949 DDX60LQ5H9U9 1706 aaKnown RBP13.13□□□□□ -0.31
HLA-DQA1-202ENST00000374949 PDS5AQ29RF7 1337 aaKnown RBP13.13□□□□□ -0.31
HLA-DQA1-202ENST00000374949 MAST2Q6P0Q8 1798 aa13.12□□□□□ -0.31
HLA-DQA1-202ENST00000374949 PLXNB2O15031 1838 aa13.12□□□□□ -0.31
HLA-DQA1-202ENST00000374949 SOX1O00570 391 aaPredicted RBP13.12□□□□□ -0.31
HLA-DQA1-202ENST00000374949 EVI5O60447 810 aa13.12□□□□□ -0.31
HLA-DQA1-202ENST00000374949 CTNND1O60716 968 aaKnown RBP13.12□□□□□ -0.31
HLA-DQA1-202ENST00000374949 TFRCP02786 760 aaKnown RBP13.12□□□□□ -0.31
HLA-DQA1-202ENST00000374949 RHBDL3P58872 404 aa13.12□□□□□ -0.31
HLA-DQA1-202ENST00000374949 MAP3K10Q02779 954 aa13.12□□□□□ -0.31
HLA-DQA1-202ENST00000374949 IRF5Q13568 498 aa13.12□□□□□ -0.31
HLA-DQA1-202ENST00000374949 PXYLP1Q8TE99 480 aa13.12□□□□□ -0.31
HLA-DQA1-202ENST00000374949 DIS3LQ8TF46 1054 aaKnown RBP13.12□□□□□ -0.31
HLA-DQA1-202ENST00000374949 ZNF384Q8TF68 577 aa13.12□□□□□ -0.31
HLA-DQA1-202ENST00000374949 FSD1Q9BTV5 496 aa13.12□□□□□ -0.31
HLA-DQA1-202ENST00000374949 PAK6Q9NQU5 681 aaPredicted RBP13.12□□□□□ -0.31
HLA-DQA1-202ENST00000374949 PAG1Q9NWQ8 432 aa13.12□□□□□ -0.31
HLA-DQA1-202ENST00000374949 LAMA3Q16787 3333 aa13.12□□□□□ -0.31
HLA-DQA1-202ENST00000374949 ARID4AP29374 1257 aaPredicted RBP13.11□□□□□ -0.31
HLA-DQA1-202ENST00000374949 MECOMQ03112 1051 aa13.11□□□□□ -0.31
HLA-DQA1-202ENST00000374949 FAM110CQ1W6H9 321 aa13.11□□□□□ -0.31
HLA-DQA1-202ENST00000374949 SLF2Q8IX21 1173 aa13.11□□□□□ -0.31
HLA-DQA1-202ENST00000374949 RUFY2Q8WXA3 655 aa13.11□□□□□ -0.31
HLA-DQA1-202ENST00000374949 COA7Q96BR5 231 aa13.11□□□□□ -0.31
HLA-DQA1-202ENST00000374949 ESYT1Q9BSJ8 1104 aa13.11□□□□□ -0.31
HLA-DQA1-202ENST00000374949 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.11□□□□□ -0.31
HLA-DQA1-202ENST00000374949 DIAPH3Q9NSV4 1193 aa13.11□□□□□ -0.31
HLA-DQA1-202ENST00000374949 COL2A1P02458 1487 aaPredicted RBP13.1□□□□□ -0.31
HLA-DQA1-202ENST00000374949 CDK5RAP2Q96SN8 1893 aa13.1□□□□□ -0.31
HLA-DQA1-202ENST00000374949 GOLIM4O00461 696 aa13.1□□□□□ -0.31
HLA-DQA1-202ENST00000374949 REC8O95072 547 aa13.1□□□□□ -0.31
HLA-DQA1-202ENST00000374949 SPTY2D1Q68D10 685 aaPredicted RBP13.1□□□□□ -0.31
HLA-DQA1-202ENST00000374949 PI16Q6UXB8 463 aa13.1□□□□□ -0.31
HLA-DQA1-202ENST00000374949 KBTBD3Q8NAB2 608 aa13.1□□□□□ -0.31
HLA-DQA1-202ENST00000374949 FAM163AQ96GL9 167 aaPredicted RBP13.1□□□□□ -0.31
HLA-DQA1-202ENST00000374949 LRCH3Q96II8 777 aa13.1□□□□□ -0.31
HLA-DQA1-202ENST00000374949 PAWRQ96IZ0 340 aaKnown RBP13.1□□□□□ -0.31
HLA-DQA1-202ENST00000374949 C22orf23Q9BZE7 217 aa13.1□□□□□ -0.31
HLA-DQA1-202ENST00000374949 CRISPLD2Q9H0B8 497 aa13.1□□□□□ -0.31
HLA-DQA1-202ENST00000374949 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.1□□□□□ -0.31
HLA-DQA1-202ENST00000374949 PNMA3Q9UL41 463 aa13.1□□□□□ -0.31
HLA-DQA1-202ENST00000374949 NDUFB9Q9Y6M9 179 aa13.1□□□□□ -0.31
HLA-DQA1-202ENST00000374949 GPR75-ASB3A0A0A6YYF3 556 aa13.09□□□□□ -0.31
HLA-DQA1-202ENST00000374949 ZBTB22O15209 634 aa13.09□□□□□ -0.31
HLA-DQA1-202ENST00000374949 HMGCS2P54868 508 aa13.09□□□□□ -0.31
HLA-DQA1-202ENST00000374949 SPP2Q13103 211 aa13.09□□□□□ -0.31
HLA-DQA1-202ENST00000374949 RRP1BQ14684 758 aaKnown RBP13.09□□□□□ -0.31
HLA-DQA1-202ENST00000374949 LRRFIP1Q32MZ4 808 aaKnown RBP13.09□□□□□ -0.31
HLA-DQA1-202ENST00000374949 ERICH6Q7L0X2 663 aa13.09□□□□□ -0.31
HLA-DQA1-202ENST00000374949 PROCA1Q8NCQ7 364 aaPredicted RBP13.09□□□□□ -0.31
HLA-DQA1-202ENST00000374949 EDC3Q96F86 508 aaKnown RBP13.09□□□□□ -0.31
HLA-DQA1-202ENST00000374949 TBC1D32Q96NH3 1257 aa13.09□□□□□ -0.31
HLA-DQA1-202ENST00000374949 SNRKQ9NRH2 765 aa13.09□□□□□ -0.31
HLA-DQA1-202ENST00000374949 TBC1D12O60347 775 aa13.08□□□□□ -0.32
HLA-DQA1-202ENST00000374949 MCAMP43121 646 aa13.08□□□□□ -0.32
HLA-DQA1-202ENST00000374949 ZAP70P43403 619 aa13.08□□□□□ -0.32
HLA-DQA1-202ENST00000374949 TRIM32Q13049 653 aa13.08□□□□□ -0.32
HLA-DQA1-202ENST00000374949 TTF1Q15361 905 aaPredicted RBP13.08□□□□□ -0.32
HLA-DQA1-202ENST00000374949 CWC27Q6UX04 472 aaKnown RBP13.08□□□□□ -0.32
HLA-DQA1-202ENST00000374949 C7orf61Q8IZ16 206 aa13.08□□□□□ -0.32
HLA-DQA1-202ENST00000374949 USP26Q9BXU7 913 aa13.08□□□□□ -0.32
HLA-DQA1-202ENST00000374949 OSBPL5Q9H0X9 879 aaPredicted RBP13.08□□□□□ -0.32
HLA-DQA1-202ENST00000374949 HMG20BQ9P0W2 317 aa13.08□□□□□ -0.32
HLA-DQA1-202ENST00000374949 FOCADQ5VW36 1801 aa13.08□□□□□ -0.32
HLA-DQA1-202ENST00000374949 CUL9Q8IWT3 2517 aa13.08□□□□□ -0.32
HLA-DQA1-202ENST00000374949 A0A1W2PPC1 479 aa13.07□□□□□ -0.32
HLA-DQA1-202ENST00000374949 SGSM2O43147 1006 aa13.07□□□□□ -0.32
HLA-DQA1-202ENST00000374949 HMGCRP04035 888 aa13.07□□□□□ -0.32
HLA-DQA1-202ENST00000374949 ANP32AP39687 249 aaKnown RBP13.07□□□□□ -0.32
HLA-DQA1-202ENST00000374949 NMIQ13287 307 aaPredicted RBP13.07□□□□□ -0.32
HLA-DQA1-202ENST00000374949 NECAB2Q7Z6G3 386 aa13.07□□□□□ -0.32
HLA-DQA1-202ENST00000374949 SPATA5Q8NB90 893 aa13.07□□□□□ -0.32
HLA-DQA1-202ENST00000374949 ZNF280CQ8ND82 737 aa13.07□□□□□ -0.32
HLA-DQA1-202ENST00000374949 NSUN4Q96CB9 384 aaKnown RBP13.07□□□□□ -0.32
HLA-DQA1-202ENST00000374949 ASCC2Q9H1I8 757 aaPredicted RBP13.07□□□□□ -0.32
HLA-DQA1-202ENST00000374949 ZMYND8Q9ULU4 1186 aaPredicted RBP13.07□□□□□ -0.32
HLA-DQA1-202ENST00000374949 RNF113AO15541 343 aaKnown RBP13.06□□□□□ -0.32
HLA-DQA1-202ENST00000374949 EPB41L2O43491 1005 aaKnown RBP13.06□□□□□ -0.32
HLA-DQA1-202ENST00000374949 PEX10O60683 326 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms