RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.41■□□□□ 0.06
CLIC4-201ENST00000374379 PDCL3Q9H2J4 239 aa15.41■□□□□ 0.06
CLIC4-201ENST00000374379 OVOS2A0A0G2JMS6 1433 aa15.41■□□□□ 0.06
CLIC4-201ENST00000374379 CPDO75976 1380 aa15.41■□□□□ 0.06
CLIC4-201ENST00000374379 GSG1L2A8MUP6 293 aa15.41■□□□□ 0.06
CLIC4-201ENST00000374379 KIF28PB7ZC32 967 aa15.41■□□□□ 0.06
CLIC4-201ENST00000374379 TRIM37O94972 964 aa15.41■□□□□ 0.06
CLIC4-201ENST00000374379 NKX1-1Q15270 411 aaPredicted RBP15.41■□□□□ 0.06
CLIC4-201ENST00000374379 PNMA1Q8ND90 353 aa15.41■□□□□ 0.06
CLIC4-201ENST00000374379 CCDC148Q8NFR7 591 aa15.41■□□□□ 0.06
CLIC4-201ENST00000374379 CCDC12Q8WUD4 166 aaPredicted RBP15.41■□□□□ 0.06
CLIC4-201ENST00000374379 CACTINQ8WUQ7 758 aaKnown RBP15.41■□□□□ 0.06
CLIC4-201ENST00000374379 CALML4Q96GE6 196 aa15.41■□□□□ 0.06
CLIC4-201ENST00000374379 FANCLQ9NW38 375 aa15.41■□□□□ 0.06
CLIC4-201ENST00000374379 TMEM266Q2M3C6 531 aa15.4■□□□□ 0.06
CLIC4-201ENST00000374379 PCDHB6Q9Y5E3 794 aa15.4■□□□□ 0.06
CLIC4-201ENST00000374379 PLEKHA8P1O95397 391 aa15.4■□□□□ 0.06
CLIC4-201ENST00000374379 SKIDA1Q1XH10 827 aa15.4■□□□□ 0.06
CLIC4-201ENST00000374379 GOLGA6L1Q8N7Z2 621 aa15.4■□□□□ 0.06
CLIC4-201ENST00000374379 SMARCC2Q8TAQ2 1214 aa15.4■□□□□ 0.06
CLIC4-201ENST00000374379 PARP1P09874 1014 aaKnown RBP15.4■□□□□ 0.06
CLIC4-201ENST00000374379 CASQ1P31415 396 aa15.4■□□□□ 0.06
CLIC4-201ENST00000374379 ANTXR2P58335 489 aa15.4■□□□□ 0.06
CLIC4-201ENST00000374379 CPVLQ9H3G5 476 aa15.4■□□□□ 0.06
CLIC4-201ENST00000374379 COL15A1P39059 1388 aa15.4■□□□□ 0.06
CLIC4-201ENST00000374379 BMP15O95972 392 aa15.39■□□□□ 0.05
CLIC4-201ENST00000374379 SMYD4Q8IYR2 804 aaPredicted RBP15.39■□□□□ 0.05
CLIC4-201ENST00000374379 POLR3EQ9NVU0 708 aa15.39■□□□□ 0.05
CLIC4-201ENST00000374379 CTNND2Q9UQB3 1225 aa15.39■□□□□ 0.05
CLIC4-201ENST00000374379 GUCY1A2P33402 732 aa15.39■□□□□ 0.05
CLIC4-201ENST00000374379 RRP36Q96EU6 259 aaKnown RBP15.39■□□□□ 0.05
CLIC4-201ENST00000374379 IGSF3O75054 1194 aa15.39■□□□□ 0.05
CLIC4-201ENST00000374379 RBM17Q96I25 401 aaKnown RBP15.39■□□□□ 0.05
CLIC4-201ENST00000374379 ARID4AP29374 1257 aaPredicted RBP15.39■□□□□ 0.05
CLIC4-201ENST00000374379 PDLIM2Q96JY6 352 aa15.39■□□□□ 0.05
CLIC4-201ENST00000374379 TXKP42681 527 aa15.38■□□□□ 0.05
CLIC4-201ENST00000374379 ZNF34Q8IZ26 560 aa15.38■□□□□ 0.05
CLIC4-201ENST00000374379 C6orf50Q9HD87 102 aa15.38■□□□□ 0.05
CLIC4-201ENST00000374379 BAZ2BQ9UIF8 2168 aaKnown RBP15.38■□□□□ 0.05
CLIC4-201ENST00000374379 KIF5CO60282 957 aa15.38■□□□□ 0.05
CLIC4-201ENST00000374379 ATP1A3P13637 1013 aa15.38■□□□□ 0.05
CLIC4-201ENST00000374379 FDPSP14324 419 aaKnown RBP15.38■□□□□ 0.05
CLIC4-201ENST00000374379 CASP1P29466 404 aa15.38■□□□□ 0.05
CLIC4-201ENST00000374379 ADKP55263 362 aaKnown RBP15.38■□□□□ 0.05
CLIC4-201ENST00000374379 PTGDRQ13258 359 aa15.38■□□□□ 0.05
CLIC4-201ENST00000374379 LONRF3Q496Y0 759 aa15.38■□□□□ 0.05
CLIC4-201ENST00000374379 SLC44A5Q8NCS7 719 aa15.38■□□□□ 0.05
CLIC4-201ENST00000374379 OXER1Q8TDS5 423 aa15.38■□□□□ 0.05
CLIC4-201ENST00000374379 CSRNP2Q9H175 543 aa15.38■□□□□ 0.05
CLIC4-201ENST00000374379 EXOC1Q9NV70 894 aa15.38■□□□□ 0.05
CLIC4-201ENST00000374379 USP17L3A6NCW0 530 aa15.38■□□□□ 0.05
CLIC4-201ENST00000374379 USP17L4A6NCW7 530 aa15.38■□□□□ 0.05
CLIC4-201ENST00000374379 WTIPA6NIX2 430 aaPredicted RBP15.38■□□□□ 0.05
CLIC4-201ENST00000374379 KIF2AO00139 706 aaPredicted RBP15.38■□□□□ 0.05
CLIC4-201ENST00000374379 CCNT1O60563 726 aaKnown RBP15.38■□□□□ 0.05
CLIC4-201ENST00000374379 INF2Q27J81 1249 aa15.38■□□□□ 0.05
CLIC4-201ENST00000374379 KRBA2Q6ZNG9 492 aa15.38■□□□□ 0.05
CLIC4-201ENST00000374379 USP17L1Q7RTZ2 530 aa15.38■□□□□ 0.05
CLIC4-201ENST00000374379 SLC4A9Q96Q91 983 aa15.38■□□□□ 0.05
CLIC4-201ENST00000374379 LY9Q9HBG7 655 aa15.38■□□□□ 0.05
CLIC4-201ENST00000374379 FRMPD2Q68DX3 1309 aaPredicted RBP15.38■□□□□ 0.05
CLIC4-201ENST00000374379 IFNAR1P17181 557 aa15.37■□□□□ 0.05
CLIC4-201ENST00000374379 SF3B2Q13435 895 aaKnown RBP15.37■□□□□ 0.05
CLIC4-201ENST00000374379 LRRC47Q8N1G4 583 aaKnown RBP15.37■□□□□ 0.05
CLIC4-201ENST00000374379 TDRD7Q8NHU6 1098 aaKnown RBP15.37■□□□□ 0.05
CLIC4-201ENST00000374379 EYA3Q99504 573 aa15.37■□□□□ 0.05
CLIC4-201ENST00000374379 RAB34Q9BZG1 259 aa15.37■□□□□ 0.05
CLIC4-201ENST00000374379 CAMTA2O94983 1202 aa15.37■□□□□ 0.05
CLIC4-201ENST00000374379 TRIM21P19474 475 aaKnown RBP15.37■□□□□ 0.05
CLIC4-201ENST00000374379 BTDP43251 543 aa15.37■□□□□ 0.05
CLIC4-201ENST00000374379 CCDC70Q6NSX1 233 aa15.37■□□□□ 0.05
CLIC4-201ENST00000374379 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.37■□□□□ 0.05
CLIC4-201ENST00000374379 BSDC1Q9NW68 430 aaPredicted RBP15.37■□□□□ 0.05
CLIC4-201ENST00000374379 PAXBP1Q9Y5B6 917 aa15.37■□□□□ 0.05
CLIC4-201ENST00000374379 FMNL1O95466 1100 aaPredicted RBP15.37■□□□□ 0.05
CLIC4-201ENST00000374379 A0A1W2PQ27 194 aa15.36■□□□□ 0.05
CLIC4-201ENST00000374379 A0A1W2PQ64 194 aa15.36■□□□□ 0.05
CLIC4-201ENST00000374379 A0A1W2PQD8 194 aa15.36■□□□□ 0.05
CLIC4-201ENST00000374379 TTF2Q9UNY4 1162 aaKnown RBP15.36■□□□□ 0.05
CLIC4-201ENST00000374379 KIF13AQ9H1H9 1805 aa15.36■□□□□ 0.05
CLIC4-201ENST00000374379 ARHGEF1Q92888 912 aaKnown RBP15.36■□□□□ 0.05
CLIC4-201ENST00000374379 LIFRP42702 1097 aa15.36■□□□□ 0.05
CLIC4-201ENST00000374379 DPP8Q6V1X1 898 aaPredicted RBP15.36■□□□□ 0.05
CLIC4-201ENST00000374379 CACNA2D4Q7Z3S7 1137 aa15.36■□□□□ 0.05
CLIC4-201ENST00000374379 KIAA0825Q8IV33 1275 aa15.36■□□□□ 0.05
CLIC4-201ENST00000374379 EPSTI1Q96J88 318 aa15.36■□□□□ 0.05
CLIC4-201ENST00000374379 PLA2G12BQ9BX93 195 aa15.36■□□□□ 0.05
CLIC4-201ENST00000374379 EPB41L4AQ9HCS5 686 aaPredicted RBP15.36■□□□□ 0.05
CLIC4-201ENST00000374379 ARPP21Q9UBL0 812 aaPredicted RBP15.36■□□□□ 0.05
CLIC4-201ENST00000374379 AKAP12Q02952 1782 aa15.36■□□□□ 0.05
CLIC4-201ENST00000374379 MMP1P03956 469 aa15.36■□□□□ 0.05
CLIC4-201ENST00000374379 PLCG2P16885 1265 aa15.36■□□□□ 0.05
CLIC4-201ENST00000374379 TDRD12Q587J7 1177 aaKnown RBP15.36■□□□□ 0.05
CLIC4-201ENST00000374379 FAM84BQ96KN1 310 aaPredicted RBP15.36■□□□□ 0.05
CLIC4-201ENST00000374379 VEZTQ9HBM0 779 aa15.36■□□□□ 0.05
CLIC4-201ENST00000374379 PARP3Q9Y6F1 533 aa15.36■□□□□ 0.05
CLIC4-201ENST00000374379 SCG2P13521 617 aa15.35■□□□□ 0.05
CLIC4-201ENST00000374379 RAD51AP2Q09MP3 1159 aa15.35■□□□□ 0.05
CLIC4-201ENST00000374379 GPS2Q13227 327 aa15.35■□□□□ 0.05
CLIC4-201ENST00000374379 FKBP15Q5T1M5 1219 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms