RNA–Protein interactions for RNA: ENST00000374339.4

PTPN20-202, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN20, Length 1,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-202ENST00000374339 LLPHQ9BRT6 129 aaKnown RBP11.38□□□□□ -0.59
PTPN20-202ENST00000374339 LY9Q9HBG7 655 aa11.38□□□□□ -0.59
PTPN20-202ENST00000374339 RNF181Q9P0P0 153 aa11.38□□□□□ -0.59
PTPN20-202ENST00000374339 ZNF70Q9UC06 446 aaPredicted RBP11.38□□□□□ -0.59
PTPN20-202ENST00000374339 FAM198AQ9UFP1 575 aa11.38□□□□□ -0.59
PTPN20-202ENST00000374339 NAP1L2Q9ULW6 460 aaPredicted RBP11.38□□□□□ -0.59
PTPN20-202ENST00000374339 ATRNL1Q5VV63 1379 aa11.38□□□□□ -0.59
PTPN20-202ENST00000374339 GOLGA8BA8MQT2 603 aa11.37□□□□□ -0.59
PTPN20-202ENST00000374339 H7C1D1 291 aa11.37□□□□□ -0.59
PTPN20-202ENST00000374339 LARGE1O95461 756 aa11.37□□□□□ -0.59
PTPN20-202ENST00000374339 TSPY3P0CV98 308 aa11.37□□□□□ -0.59
PTPN20-202ENST00000374339 TSPY8P0CW00 308 aa11.37□□□□□ -0.59
PTPN20-202ENST00000374339 PDIA3P30101 505 aaKnown RBP11.37□□□□□ -0.59
PTPN20-202ENST00000374339 DDIT3P35638 169 aa11.37□□□□□ -0.59
PTPN20-202ENST00000374339 TCP10Q12799 353 aa11.37□□□□□ -0.59
PTPN20-202ENST00000374339 TNFAIP1Q13829 316 aa11.37□□□□□ -0.59
PTPN20-202ENST00000374339 SLC4A8Q2Y0W8 1093 aa11.37□□□□□ -0.59
PTPN20-202ENST00000374339 APOA5Q6Q788 366 aa11.37□□□□□ -0.59
PTPN20-202ENST00000374339 CCDC83Q8IWF9 413 aa11.37□□□□□ -0.59
PTPN20-202ENST00000374339 ZSCAN29Q8IWY8 852 aaPredicted RBP11.37□□□□□ -0.59
PTPN20-202ENST00000374339 MICALL2Q8IY33 904 aa11.37□□□□□ -0.59
PTPN20-202ENST00000374339 CRACR2BQ8N4Y2 399 aaPredicted RBP11.37□□□□□ -0.59
PTPN20-202ENST00000374339 DYNLL2Q96FJ2 89 aa11.37□□□□□ -0.59
PTPN20-202ENST00000374339 ZBED3Q96IU2 234 aaPredicted RBP11.37□□□□□ -0.59
PTPN20-202ENST00000374339 TRIM34Q9BYJ4 488 aa11.37□□□□□ -0.59
PTPN20-202ENST00000374339 PI4KBQ9UBF8 816 aa11.37□□□□□ -0.59
PTPN20-202ENST00000374339 CNOT7Q9UIV1 285 aaKnown RBP11.37□□□□□ -0.59
PTPN20-202ENST00000374339 SMC3Q9UQE7 1217 aa11.37□□□□□ -0.59
PTPN20-202ENST00000374339 KIF3AQ9Y496 699 aa11.37□□□□□ -0.59
PTPN20-202ENST00000374339 PCDHAC2Q9Y5I4 1007 aa11.37□□□□□ -0.59
PTPN20-202ENST00000374339 SLC12A7Q9Y666 1083 aa11.37□□□□□ -0.59
PTPN20-202ENST00000374339 TNKSO95271 1327 aa11.37□□□□□ -0.59
PTPN20-202ENST00000374339 ZNF541Q9H0D2 1346 aa11.37□□□□□ -0.59
PTPN20-202ENST00000374339 ZC3H4Q9UPT8 1303 aaKnown RBP11.37□□□□□ -0.59
PTPN20-202ENST00000374339 SMIM22K7EJ46 135 aa11.36□□□□□ -0.59
PTPN20-202ENST00000374339 WNT10BO00744 389 aa11.36□□□□□ -0.59
PTPN20-202ENST00000374339 ZBTB43O43298 467 aa11.36□□□□□ -0.59
PTPN20-202ENST00000374339 CD44P16070 742 aaKnown RBP11.36□□□□□ -0.59
PTPN20-202ENST00000374339 RASA1P20936 1047 aa11.36□□□□□ -0.59
PTPN20-202ENST00000374339 TNNI2P48788 182 aa11.36□□□□□ -0.59
PTPN20-202ENST00000374339 CACNB3P54284 484 aa11.36□□□□□ -0.59
PTPN20-202ENST00000374339 TFAP4Q01664 338 aa11.36□□□□□ -0.59
PTPN20-202ENST00000374339 GABPAQ06546 454 aa11.36□□□□□ -0.59
PTPN20-202ENST00000374339 STK3Q13188 491 aa11.36□□□□□ -0.59
PTPN20-202ENST00000374339 PPP2R5BQ15173 497 aa11.36□□□□□ -0.59
PTPN20-202ENST00000374339 PPP4R3BQ5MIZ7 849 aa11.36□□□□□ -0.59
PTPN20-202ENST00000374339 IFIT1BQ5T764 474 aaKnown RBP11.36□□□□□ -0.59
PTPN20-202ENST00000374339 FAM83AQ86UY5 434 aa11.36□□□□□ -0.59
PTPN20-202ENST00000374339 FOXP4Q8IVH2 680 aaPredicted RBP11.36□□□□□ -0.59
PTPN20-202ENST00000374339 ENAHQ8N8S7 591 aaPredicted RBP11.36□□□□□ -0.59
PTPN20-202ENST00000374339 NECAB1Q8N987 351 aa11.36□□□□□ -0.59
PTPN20-202ENST00000374339 FAM151AQ8WW52 585 aa11.36□□□□□ -0.59
PTPN20-202ENST00000374339 TCP11L1Q9NUJ3 509 aa11.36□□□□□ -0.59
PTPN20-202ENST00000374339 CCDC196A0A1B0GTZ2 297 aa11.35□□□□□ -0.59
PTPN20-202ENST00000374339 CLRN2A0PK11 232 aa11.35□□□□□ -0.59
PTPN20-202ENST00000374339 SIPA1L1O43166 1804 aa11.35□□□□□ -0.59
PTPN20-202ENST00000374339 CALM1P0DP23 149 aa11.35□□□□□ -0.59
PTPN20-202ENST00000374339 CALM2P0DP24 149 aa11.35□□□□□ -0.59
PTPN20-202ENST00000374339 CALM3P0DP25 149 aa11.35□□□□□ -0.59
PTPN20-202ENST00000374339 PDCP20941 246 aa11.35□□□□□ -0.59
PTPN20-202ENST00000374339 METAP2P50579 478 aaKnown RBP eCLIP11.35□□□□□ -0.59
PTPN20-202ENST00000374339 NUCB2P80303 420 aa11.35□□□□□ -0.59
PTPN20-202ENST00000374339 HMGN5P82970 282 aaKnown RBP11.35□□□□□ -0.59
PTPN20-202ENST00000374339 NID2Q14112 1375 aa11.35□□□□□ -0.59
PTPN20-202ENST00000374339 SEC23AQ15436 765 aa11.35□□□□□ -0.59
PTPN20-202ENST00000374339 FAM47AQ5JRC9 791 aa11.35□□□□□ -0.59
PTPN20-202ENST00000374339 CPLX2Q6PUV4 134 aaKnown RBP11.35□□□□□ -0.59
PTPN20-202ENST00000374339 DGKHQ86XP1 1220 aa11.35□□□□□ -0.59
PTPN20-202ENST00000374339 CCDC17Q96LX7 622 aa11.35□□□□□ -0.59
PTPN20-202ENST00000374339 PLIN4Q96Q06 1357 aa11.35□□□□□ -0.59
PTPN20-202ENST00000374339 ZKSCAN3Q9BRR0 538 aa11.35□□□□□ -0.59
PTPN20-202ENST00000374339 VEZTQ9HBM0 779 aa11.35□□□□□ -0.59
PTPN20-202ENST00000374339 GPHNQ9NQX3 736 aaPredicted RBP11.35□□□□□ -0.59
PTPN20-202ENST00000374339 GPRC5DQ9NZD1 345 aa11.35□□□□□ -0.59
PTPN20-202ENST00000374339 HERC5Q9UII4 1024 aaKnown RBP11.35□□□□□ -0.59
PTPN20-202ENST00000374339 BRPF3Q9ULD4 1205 aa11.35□□□□□ -0.59
PTPN20-202ENST00000374339 DDTLA6NHG4 134 aaPredicted RBP11.34□□□□□ -0.59
PTPN20-202ENST00000374339 TCP10L2B9ZVM9 353 aa11.34□□□□□ -0.59
PTPN20-202ENST00000374339 CPLX1O14810 134 aa11.34□□□□□ -0.59
PTPN20-202ENST00000374339 CDKL5O76039 1030 aa11.34□□□□□ -0.59
PTPN20-202ENST00000374339 LMOD1P29536 600 aaPredicted RBP11.34□□□□□ -0.59
PTPN20-202ENST00000374339 SCRN1Q12765 414 aa11.34□□□□□ -0.59
PTPN20-202ENST00000374339 KIF4BQ2VIQ3 1234 aa11.34□□□□□ -0.59
PTPN20-202ENST00000374339 C9orf131Q5VYM1 1079 aa11.34□□□□□ -0.59
PTPN20-202ENST00000374339 DPY19L2Q6NUT2 758 aa11.34□□□□□ -0.59
PTPN20-202ENST00000374339 CATIPQ7Z7H3 387 aa11.34□□□□□ -0.59
PTPN20-202ENST00000374339 METTL16Q86W50 562 aaKnown RBP11.34□□□□□ -0.59
PTPN20-202ENST00000374339 ZNF654Q8IZM8 581 aa11.34□□□□□ -0.59
PTPN20-202ENST00000374339 SLC44A5Q8NCS7 719 aa11.34□□□□□ -0.59
PTPN20-202ENST00000374339 NEDD1Q8NHV4 660 aa11.34□□□□□ -0.59
PTPN20-202ENST00000374339 NKX2-3Q8TAU0 364 aa11.34□□□□□ -0.59
PTPN20-202ENST00000374339 CSRNP1Q96S65 589 aa11.34□□□□□ -0.59
PTPN20-202ENST00000374339 CNTNAP1P78357 1384 aa11.33□□□□□ -0.6
PTPN20-202ENST00000374339 GOLGA8AA7E2F4 631 aa11.33□□□□□ -0.6
PTPN20-202ENST00000374339 DDAH1O94760 285 aa11.33□□□□□ -0.6
PTPN20-202ENST00000374339 PRKCSHP14314 528 aaPredicted RBP11.33□□□□□ -0.6
PTPN20-202ENST00000374339 GJB2P29033 226 aa11.33□□□□□ -0.6
PTPN20-202ENST00000374339 CCT2P78371 535 aaKnown RBP11.33□□□□□ -0.6
PTPN20-202ENST00000374339 NBPF9Q3BBW0 867 aa11.33□□□□□ -0.6
PTPN20-202ENST00000374339 MICU3Q86XE3 530 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms