RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 JDP2Q8WYK2 163 aa8.12□□□□□ -1.11
TGFBR3-202ENST00000370399 TEKT1Q969V4 418 aa8.12□□□□□ -1.11
TGFBR3-202ENST00000370399 ELP1O95163 1332 aa8.12□□□□□ -1.11
TGFBR3-202ENST00000370399 MYO1BO43795 1136 aa8.12□□□□□ -1.11
TGFBR3-202ENST00000370399 PLEKHA8P1O95397 391 aa8.12□□□□□ -1.11
TGFBR3-202ENST00000370399 EXOSC10Q01780 885 aaKnown RBP8.12□□□□□ -1.11
TGFBR3-202ENST00000370399 SH3RF3Q8TEJ3 882 aaPredicted RBP8.12□□□□□ -1.11
TGFBR3-202ENST00000370399 CALML4Q96GE6 196 aa8.12□□□□□ -1.11
TGFBR3-202ENST00000370399 RAB34Q9BZG1 259 aa8.12□□□□□ -1.11
TGFBR3-202ENST00000370399 CD209Q9NNX6 404 aa8.12□□□□□ -1.11
TGFBR3-202ENST00000370399 GJA3Q9Y6H8 435 aa8.12□□□□□ -1.11
TGFBR3-202ENST00000370399 BCL9O00512 1426 aa8.11□□□□□ -1.11
TGFBR3-202ENST00000370399 N4BP3O15049 544 aa8.11□□□□□ -1.11
TGFBR3-202ENST00000370399 ERCC3P19447 782 aa8.11□□□□□ -1.11
TGFBR3-202ENST00000370399 SF3B3Q15393 1217 aaKnown RBP8.11□□□□□ -1.11
TGFBR3-202ENST00000370399 TSGA10IPQ3SY00 556 aa8.11□□□□□ -1.11
TGFBR3-202ENST00000370399 KANK3Q6NY19 840 aa8.11□□□□□ -1.11
TGFBR3-202ENST00000370399 TXNRD3Q86VQ6 643 aa8.11□□□□□ -1.11
TGFBR3-202ENST00000370399 TRMT44Q8IYL2 757 aaKnown RBP8.11□□□□□ -1.11
TGFBR3-202ENST00000370399 PGBD1Q96JS3 809 aa8.11□□□□□ -1.11
TGFBR3-202ENST00000370399 HDAC9Q9UKV0 1011 aa8.11□□□□□ -1.11
TGFBR3-202ENST00000370399 GNA11P29992 359 aa8.11□□□□□ -1.11
TGFBR3-202ENST00000370399 TXKP42681 527 aa8.11□□□□□ -1.11
TGFBR3-202ENST00000370399 PRR5LQ6MZQ0 368 aa8.11□□□□□ -1.11
TGFBR3-202ENST00000370399 FCHSD1Q86WN1 690 aa8.11□□□□□ -1.11
TGFBR3-202ENST00000370399 EEF2KMTQ96G04 330 aa8.11□□□□□ -1.11
TGFBR3-202ENST00000370399 CCNT1O60563 726 aaKnown RBP8.11□□□□□ -1.11
TGFBR3-202ENST00000370399 BMP15O95972 392 aa8.11□□□□□ -1.11
TGFBR3-202ENST00000370399 DDIT3P35638 169 aa8.11□□□□□ -1.11
TGFBR3-202ENST00000370399 SLC1A4P43007 532 aa8.11□□□□□ -1.11
TGFBR3-202ENST00000370399 ASIC1P78348 528 aa8.11□□□□□ -1.11
TGFBR3-202ENST00000370399 LINC00301Q8NCQ3 95 aa8.11□□□□□ -1.11
TGFBR3-202ENST00000370399 DCP1AQ9NPI6 582 aaPredicted RBP8.11□□□□□ -1.11
TGFBR3-202ENST00000370399 SERTAD1Q9UHV2 236 aa8.11□□□□□ -1.11
TGFBR3-202ENST00000370399 FAM196BA6NMK8 535 aa8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 LIFRP42702 1097 aa8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 PTPN21Q16825 1174 aa8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 INF2Q27J81 1249 aa8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 USP17L2Q6R6M4 530 aa8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 IQUBQ8NA54 791 aa8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 CUL5Q93034 780 aa8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 TRIM47Q96LD4 638 aa8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 BLZF1Q9H2G9 400 aa8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 EPB41L4AQ9HCS5 686 aaPredicted RBP8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 KIAA1468Q9P260 1216 aa8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 RCOR1Q9UKL0 485 aa8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 DLG5Q8TDM6 1919 aa8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 CLRN2A0PK11 232 aa8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 UBE2Q2LH0YL09 131 aa8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 SEMA3EO15041 775 aa8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 CUTAO60888 179 aa8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 IFNAR1P17181 557 aa8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 USH1GQ495M9 461 aa8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 WDR78Q5VTH9 848 aa8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 BIN2Q9UBW5 565 aaPredicted RBP8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 FMN2Q9NZ56 1722 aa8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 KNDC1Q76NI1 1749 aa8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 RPAP1Q9BWH6 1393 aaPredicted RBP8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 RAD17O75943 681 aa8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 ANTXR2P58335 489 aa8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 GPSM2P81274 684 aa8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 NUP88Q99567 741 aaPredicted RBP8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 DEF6Q9H4E7 631 aa8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 LY9Q9HBG7 655 aa8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 ZNHIT6Q9NWK9 470 aaKnown RBP8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 TCP10L2B9ZVM9 353 aa8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 SCG2P13521 617 aa8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 GUCY1A2P33402 732 aa8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 MTIF2P46199 727 aaKnown RBP8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 ENAHQ8N8S7 591 aaPredicted RBP8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 RTEL1Q9NZ71 1219 aa8.1□□□□□ -1.11
TGFBR3-202ENST00000370399 SMCO2A6NFE2 343 aa8.09□□□□□ -1.11
TGFBR3-202ENST00000370399 PTGDRQ13258 359 aa8.09□□□□□ -1.11
TGFBR3-202ENST00000370399 PRKG1Q13976 671 aa8.09□□□□□ -1.11
TGFBR3-202ENST00000370399 NOM1Q5C9Z4 860 aaKnown RBP8.09□□□□□ -1.11
TGFBR3-202ENST00000370399 GRAMD1CQ8IYS0 662 aa8.09□□□□□ -1.11
TGFBR3-202ENST00000370399 BAZ2BQ9UIF8 2168 aaKnown RBP8.09□□□□□ -1.11
TGFBR3-202ENST00000370399 COBLO75128 1261 aa8.09□□□□□ -1.11
TGFBR3-202ENST00000370399 LRMPQ12912 555 aa8.09□□□□□ -1.11
TGFBR3-202ENST00000370399 SLC39A14Q15043 492 aa8.09□□□□□ -1.11
TGFBR3-202ENST00000370399 ZNF772Q68DY9 489 aaPredicted RBP8.09□□□□□ -1.11
TGFBR3-202ENST00000370399 CTR9Q6PD62 1173 aa8.09□□□□□ -1.11
TGFBR3-202ENST00000370399 SPICE1Q8N0Z3 855 aa8.09□□□□□ -1.11
TGFBR3-202ENST00000370399 NSUN4Q96CB9 384 aaKnown RBP8.09□□□□□ -1.11
TGFBR3-202ENST00000370399 SAMM50Q9Y512 469 aa8.09□□□□□ -1.11
TGFBR3-202ENST00000370399 PCDHB6Q9Y5E3 794 aa8.09□□□□□ -1.11
TGFBR3-202ENST00000370399 MRVI1Q9Y6F6 885 aa8.09□□□□□ -1.11
TGFBR3-202ENST00000370399 C21orf2O43822 256 aa8.09□□□□□ -1.11
TGFBR3-202ENST00000370399 URI1O94763 535 aaPredicted RBP8.09□□□□□ -1.11
TGFBR3-202ENST00000370399 SLC16A2P36021 539 aa8.09□□□□□ -1.11
TGFBR3-202ENST00000370399 MYL5Q02045 173 aa8.09□□□□□ -1.11
TGFBR3-202ENST00000370399 EN1Q05925 392 aaPredicted RBP8.09□□□□□ -1.11
TGFBR3-202ENST00000370399 PPP2R5BQ15173 497 aa8.09□□□□□ -1.11
TGFBR3-202ENST00000370399 ARHGAP29Q52LW3 1261 aa8.09□□□□□ -1.11
TGFBR3-202ENST00000370399 SMARCC2Q8TAQ2 1214 aa8.09□□□□□ -1.11
TGFBR3-202ENST00000370399 AKAP12Q02952 1782 aa8.09□□□□□ -1.11
TGFBR3-202ENST00000370399 FMNL1O95466 1100 aaPredicted RBP8.08□□□□□ -1.12
TGFBR3-202ENST00000370399 CTDNEP1O95476 244 aa8.08□□□□□ -1.12
TGFBR3-202ENST00000370399 CCT6AP40227 531 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms